RNA–Protein interactions for RNA: ENST00000523390.1

PCDHGB1-201, Transcript of protocadherin gamma subfamily B, 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGB1, Length 4,590 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB1-201ENST00000523390 TSSC4Q9Y5U2 329 aaPredicted RBP10.11□□□□□ -0.79
PCDHGB1-201ENST00000523390 SPCS1Q9Y6A9 102 aa10.11□□□□□ -0.79
PCDHGB1-201ENST00000523390 APRG1Q8IVJ8 170 aa10.11□□□□□ -0.79
PCDHGB1-201ENST00000523390 ATG2AQ2TAZ0 1938 aa10.1□□□□□ -0.79
PCDHGB1-201ENST00000523390 KIR2DL5BA0A0G2JN68 375 aa10.1□□□□□ -0.79
PCDHGB1-201ENST00000523390 KIR2DL5BA0A0G2JPC4 375 aa10.1□□□□□ -0.79
PCDHGB1-201ENST00000523390 RHODO00212 210 aa10.1□□□□□ -0.79
PCDHGB1-201ENST00000523390 MALP21145 153 aa10.1□□□□□ -0.79
PCDHGB1-201ENST00000523390 KIR2DL5AQ8N109 375 aa10.1□□□□□ -0.79
PCDHGB1-201ENST00000523390 Q8N8P6 123 aa10.1□□□□□ -0.79
PCDHGB1-201ENST00000523390 MRPL53Q96EL3 112 aaKnown RBP10.1□□□□□ -0.79
PCDHGB1-201ENST00000523390 MSRB1Q9NZV6 116 aa10.1□□□□□ -0.79
PCDHGB1-201ENST00000523390 FSTL3O95633 263 aa10.1□□□□□ -0.79
PCDHGB1-201ENST00000523390 MPV17L2Q567V2 206 aa10.1□□□□□ -0.79
PCDHGB1-201ENST00000523390 FOXI2Q6ZQN5 318 aa10.1□□□□□ -0.79
PCDHGB1-201ENST00000523390 ACANP16112 2415 aa10.09□□□□□ -0.79
PCDHGB1-201ENST00000523390 IGHV3-38A0A0C4DH36 116 aa10.09□□□□□ -0.79
PCDHGB1-201ENST00000523390 TNFRSF13BO14836 293 aaPredicted RBP10.09□□□□□ -0.79
PCDHGB1-201ENST00000523390 PLNP26678 52 aa10.09□□□□□ -0.79
PCDHGB1-201ENST00000523390 GATA1P15976 413 aaPredicted RBP10.09□□□□□ -0.79
PCDHGB1-201ENST00000523390 LOXL1Q08397 574 aaPredicted RBP10.09□□□□□ -0.79
PCDHGB1-201ENST00000523390 WFDC11Q8NEX6 87 aa10.09□□□□□ -0.79
PCDHGB1-201ENST00000523390 AZU1P20160 251 aa10.09□□□□□ -0.79
PCDHGB1-201ENST00000523390 HSD52Q0P140 79 aa10.09□□□□□ -0.79
PCDHGB1-201ENST00000523390 SMIM2Q9BVW6 85 aa10.09□□□□□ -0.79
PCDHGB1-201ENST00000523390 LENEPQ9Y5L5 61 aa10.09□□□□□ -0.79
PCDHGB1-201ENST00000523390 RBAKDNA6NC62 111 aa10.09□□□□□ -0.79
PCDHGB1-201ENST00000523390 IGLC2P0DOY2 106 aa10.09□□□□□ -0.79
PCDHGB1-201ENST00000523390 DOPEY1Q5JWR5 2465 aa10.08□□□□□ -0.8
PCDHGB1-201ENST00000523390 A8MWV9 139 aa10.08□□□□□ -0.8
PCDHGB1-201ENST00000523390 IGLC3P0DOY3 106 aa10.08□□□□□ -0.8
PCDHGB1-201ENST00000523390 CCDC140Q96MF4 163 aa10.08□□□□□ -0.8
PCDHGB1-201ENST00000523390 C11orf68Q9H3H3 251 aaKnown RBP10.08□□□□□ -0.8
PCDHGB1-201ENST00000523390 CPAMD8Q8IZJ3 1885 aa10.08□□□□□ -0.8
PCDHGB1-201ENST00000523390 LY6LH3BQJ8 138 aa10.08□□□□□ -0.8
PCDHGB1-201ENST00000523390 WIPF2Q8TF74 440 aaPredicted RBP10.08□□□□□ -0.8
PCDHGB1-201ENST00000523390 DPH3Q96FX2 82 aa10.08□□□□□ -0.8
PCDHGB1-201ENST00000523390 NPC2P61916 151 aa10.07□□□□□ -0.8
PCDHGB1-201ENST00000523390 ZNRF2Q8NHG8 242 aa10.07□□□□□ -0.8
PCDHGB1-201ENST00000523390 SPXQ9BT56 116 aa10.07□□□□□ -0.8
PCDHGB1-201ENST00000523390 CRYGBP07316 175 aa10.07□□□□□ -0.8
PCDHGB1-201ENST00000523390 KLF12Q9Y4X4 402 aa10.07□□□□□ -0.8
PCDHGB1-201ENST00000523390 C2orf70A6NJV1 201 aa10.07□□□□□ -0.8
PCDHGB1-201ENST00000523390 CRPP02741 224 aa10.07□□□□□ -0.8
PCDHGB1-201ENST00000523390 GTSF1Q8WW33 167 aa10.07□□□□□ -0.8
PCDHGB1-201ENST00000523390 DNAL4O96015 105 aa10.06□□□□□ -0.8
PCDHGB1-201ENST00000523390 TRBV7-9A0A0J9YWB2 115 aa10.06□□□□□ -0.8
PCDHGB1-201ENST00000523390 A0A1B0GWB2 263 aa10.06□□□□□ -0.8
PCDHGB1-201ENST00000523390 PRUNE2Q8WUY3 3088 aa10.05□□□□□ -0.8
PCDHGB1-201ENST00000523390 ZNF48Q96MX3 618 aaPredicted RBP10.05□□□□□ -0.8
PCDHGB1-201ENST00000523390 SPAG8Q99932 426 aaPredicted RBP10.05□□□□□ -0.8
PCDHGB1-201ENST00000523390 MEGF9Q9H1U4 602 aa10.05□□□□□ -0.8
PCDHGB1-201ENST00000523390 F5H768 121 aa10.05□□□□□ -0.8
PCDHGB1-201ENST00000523390 SEC11AP67812 179 aa10.05□□□□□ -0.8
PCDHGB1-201ENST00000523390 GPHB5Q86YW7 130 aa10.05□□□□□ -0.8
PCDHGB1-201ENST00000523390 IGHV4-31P0DP07 118 aa10.04□□□□□ -0.8
PCDHGB1-201ENST00000523390 I3L3M4 83 aa10.04□□□□□ -0.8
PCDHGB1-201ENST00000523390 UBE2V1Q13404 147 aa10.04□□□□□ -0.8
PCDHGB1-201ENST00000523390 PLEKHB2Q96CS7 222 aa10.04□□□□□ -0.8
PCDHGB1-201ENST00000523390 TRIOO75962 3097 aa10.04□□□□□ -0.8
PCDHGB1-201ENST00000523390 A0A1W2PPR1 153 aa10.04□□□□□ -0.8
PCDHGB1-201ENST00000523390 LINC00158P58513 81 aa10.04□□□□□ -0.8
PCDHGB1-201ENST00000523390 CHAC1Q9BUX1 264 aa10.04□□□□□ -0.8
PCDHGB1-201ENST00000523390 K7EMT4 169 aa10.04□□□□□ -0.8
PCDHGB1-201ENST00000523390 IGLL1P15814 213 aa10.04□□□□□ -0.8
PCDHGB1-201ENST00000523390 DAD1P61803 113 aa10.04□□□□□ -0.8
PCDHGB1-201ENST00000523390 EBI3Q14213 229 aa10.04□□□□□ -0.8
PCDHGB1-201ENST00000523390 MRPL35Q9NZE8 188 aaKnown RBP10.04□□□□□ -0.8
PCDHGB1-201ENST00000523390 ZNF479Q96JC4 524 aa10.03□□□□□ -0.8
PCDHGB1-201ENST00000523390 COX11Q9Y6N1 276 aa10.03□□□□□ -0.8
PCDHGB1-201ENST00000523390 TMEM61Q8N0U2 210 aa10.03□□□□□ -0.8
PCDHGB1-201ENST00000523390 MRPS16Q9Y3D3 137 aaKnown RBP10.03□□□□□ -0.8
PCDHGB1-201ENST00000523390 CITED2Q99967 270 aaPredicted RBP10.02□□□□□ -0.8
PCDHGB1-201ENST00000523390 TRANK1O15050 2925 aa10.02□□□□□ -0.81
PCDHGB1-201ENST00000523390 ZNF625Q96I27 306 aaPredicted RBP10.02□□□□□ -0.81
PCDHGB1-201ENST00000523390 TIMM21Q9BVV7 248 aa10.02□□□□□ -0.81
PCDHGB1-201ENST00000523390 U3KQE9 123 aa10.02□□□□□ -0.81
PCDHGB1-201ENST00000523390 DSCAML1Q8TD84 2053 aa10.02□□□□□ -0.81
PCDHGB1-201ENST00000523390 DNAJC9-AS1A6NH13 148 aa10.02□□□□□ -0.81
PCDHGB1-201ENST00000523390 TMEM238C9JI98 176 aa10.02□□□□□ -0.81
PCDHGB1-201ENST00000523390 MORN3Q6PF18 240 aaPredicted RBP10.02□□□□□ -0.81
PCDHGB1-201ENST00000523390 NOP10Q9NPE3 64 aaKnown RBP10.02□□□□□ -0.81
PCDHGB1-201ENST00000523390 M0R2P5 195 aa10.01□□□□□ -0.81
PCDHGB1-201ENST00000523390 ESDP10768 282 aa10.01□□□□□ -0.81
PCDHGB1-201ENST00000523390 PMVKQ15126 192 aa10.01□□□□□ -0.81
PCDHGB1-201ENST00000523390 LINC00322Q6ZN03 302 aaPredicted RBP10.01□□□□□ -0.81
PCDHGB1-201ENST00000523390 RASL10AQ92737 203 aa10.01□□□□□ -0.81
PCDHGB1-201ENST00000523390 RPL39LQ96EH5 51 aaKnown RBP10.01□□□□□ -0.81
PCDHGB1-201ENST00000523390 IGHG4P01861 327 aa10.01□□□□□ -0.81
PCDHGB1-201ENST00000523390 C9orf47Q6ZRZ4 202 aa10.01□□□□□ -0.81
PCDHGB1-201ENST00000523390 IGF1P05019 195 aa10□□□□□ -0.81
PCDHGB1-201ENST00000523390 C10orf99Q6UWK7 81 aa10□□□□□ -0.81
PCDHGB1-201ENST00000523390 A0A096LPF7 62 aa10□□□□□ -0.81
PCDHGB1-201ENST00000523390 RNASE13Q5GAN3 156 aaKnown RBP10□□□□□ -0.81
PCDHGB1-201ENST00000523390 MRPL52Q86TS9 123 aaKnown RBP10□□□□□ -0.81
PCDHGB1-201ENST00000523390 DKK2Q9UBU2 259 aa10□□□□□ -0.81
PCDHGB1-201ENST00000523390 CKS1BP61024 79 aa10□□□□□ -0.81
PCDHGB1-201ENST00000523390 C6orf226Q5I0X4 101 aa10□□□□□ -0.81
PCDHGB1-201ENST00000523390 PRIMA1Q86XR5 153 aa10□□□□□ -0.81
PCDHGB1-201ENST00000523390 C20orf78Q9BR46 151 aa10□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms