RNA–Protein interactions for RNA: ENST00000523261.1

NKX3-1-202, Transcript of NK3 homeobox 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NKX3-1, Length 713 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX3-1-202ENST00000523261 RANP62826 216 aaKnown RBP8.55□□□□□ -1.04
NKX3-1-202ENST00000523261 MIR17HGQ75NE6 70 aa8.55□□□□□ -1.04
NKX3-1-202ENST00000523261 LYPD6BQ8NI32 183 aa8.55□□□□□ -1.04
NKX3-1-202ENST00000523261 CHAC2Q8WUX2 184 aa8.55□□□□□ -1.04
NKX3-1-202ENST00000523261 UQCC1Q9NVA1 299 aa8.55□□□□□ -1.04
NKX3-1-202ENST00000523261 CCSO14618 274 aa8.54□□□□□ -1.04
NKX3-1-202ENST00000523261 RNASE3P12724 160 aaKnown RBP8.54□□□□□ -1.04
NKX3-1-202ENST00000523261 OR2G3Q8NGZ4 309 aa8.54□□□□□ -1.04
NKX3-1-202ENST00000523261 BAXQ07812 192 aa8.53□□□□□ -1.04
NKX3-1-202ENST00000523261 PRR4Q16378 134 aa8.53□□□□□ -1.04
NKX3-1-202ENST00000523261 MAJINQ3KP22 176 aa8.53□□□□□ -1.04
NKX3-1-202ENST00000523261 TMEM75Q8N9X5 138 aa8.53□□□□□ -1.04
NKX3-1-202ENST00000523261 JPT2Q9H910 190 aa8.53□□□□□ -1.04
NKX3-1-202ENST00000523261 PRR34Q9NV39 138 aa8.53□□□□□ -1.04
NKX3-1-202ENST00000523261 PSORS1C2Q9UIG4 136 aa8.53□□□□□ -1.04
NKX3-1-202ENST00000523261 TRAV26-2A0A0B4J265 109 aa8.52□□□□□ -1.05
NKX3-1-202ENST00000523261 UBE2L5PA0A1B0GUS4 154 aa8.52□□□□□ -1.05
NKX3-1-202ENST00000523261 CST7O76096 145 aa8.52□□□□□ -1.05
NKX3-1-202ENST00000523261 COX6A2Q02221 97 aa8.52□□□□□ -1.05
NKX3-1-202ENST00000523261 ZNF664Q8N3J9 261 aa8.52□□□□□ -1.05
NKX3-1-202ENST00000523261 STPG4Q8N801 248 aa8.52□□□□□ -1.05
NKX3-1-202ENST00000523261 MCFD2Q8NI22 146 aa8.52□□□□□ -1.05
NKX3-1-202ENST00000523261 VCX3AQ9NNX9 186 aa8.52□□□□□ -1.05
NKX3-1-202ENST00000523261 TREM1Q9NP99 234 aa8.52□□□□□ -1.05
NKX3-1-202ENST00000523261 AP5S1Q9NUS5 200 aa8.52□□□□□ -1.05
NKX3-1-202ENST00000523261 RABL2AQ9UBK7 228 aaPredicted RBP8.52□□□□□ -1.05
NKX3-1-202ENST00000523261 C9orf170A2RU37 121 aa8.51□□□□□ -1.05
NKX3-1-202ENST00000523261 IAH1Q2TAA2 248 aaPredicted RBP8.51□□□□□ -1.05
NKX3-1-202ENST00000523261 PIK3CD-AS1Q5SR53 167 aa8.51□□□□□ -1.05
NKX3-1-202ENST00000523261 CLPSL2Q6UWE3 100 aa8.51□□□□□ -1.05
NKX3-1-202ENST00000523261 Q6ZRP5 223 aa8.51□□□□□ -1.05
NKX3-1-202ENST00000523261 DIRAS2Q96HU8 199 aa8.51□□□□□ -1.05
NKX3-1-202ENST00000523261 SLC25A21Q9BQT8 299 aaPredicted RBP8.51□□□□□ -1.05
NKX3-1-202ENST00000523261 A0A087WWL8 130 aa8.5□□□□□ -1.05
NKX3-1-202ENST00000523261 TRBV6-8A0A0A6YYG3 113 aa8.5□□□□□ -1.05
NKX3-1-202ENST00000523261 IGKV2-24A0A0C4DH68 120 aa8.5□□□□□ -1.05
NKX3-1-202ENST00000523261 FAM24AA6NFZ4 105 aa8.5□□□□□ -1.05
NKX3-1-202ENST00000523261 MBPP02686 304 aaPredicted RBP8.5□□□□□ -1.05
NKX3-1-202ENST00000523261 FAUP35544 74 aaKnown RBP8.5□□□□□ -1.05
NKX3-1-202ENST00000523261 ZNF80P51504 273 aaPredicted RBP8.5□□□□□ -1.05
NKX3-1-202ENST00000523261 CTF1Q16619 201 aa8.5□□□□□ -1.05
NKX3-1-202ENST00000523261 LGALSLQ3ZCW2 172 aaPredicted RBP8.5□□□□□ -1.05
NKX3-1-202ENST00000523261 BCL7BQ9BQE9 202 aa8.5□□□□□ -1.05
NKX3-1-202ENST00000523261 NAA50Q9GZZ1 169 aaKnown RBP8.5□□□□□ -1.05
NKX3-1-202ENST00000523261 FGF7P21781 194 aa8.49□□□□□ -1.05
NKX3-1-202ENST00000523261 UBE2D3P61077 147 aa8.49□□□□□ -1.05
NKX3-1-202ENST00000523261 UBE2D2P62837 147 aa8.49□□□□□ -1.05
NKX3-1-202ENST00000523261 PRSS3P2Q8NHM4 247 aa8.49□□□□□ -1.05
NKX3-1-202ENST00000523261 HYLS1Q96M11 299 aa8.49□□□□□ -1.05
NKX3-1-202ENST00000523261 GSKIPQ9P0R6 139 aa8.49□□□□□ -1.05
NKX3-1-202ENST00000523261 A0A087WXM4 84 aa8.48□□□□□ -1.05
NKX3-1-202ENST00000523261 L7N2F9 121 aa8.48□□□□□ -1.05
NKX3-1-202ENST00000523261 OR7C2O60412 319 aa8.48□□□□□ -1.05
NKX3-1-202ENST00000523261 NDUFS6O75380 124 aaKnown RBP8.48□□□□□ -1.05
NKX3-1-202ENST00000523261 VAMP2P63027 116 aa8.48□□□□□ -1.05
NKX3-1-202ENST00000523261 GOLT1AQ6ZVE7 132 aa8.48□□□□□ -1.05
NKX3-1-202ENST00000523261 LINC00269Q8N2A0 174 aa8.48□□□□□ -1.05
NKX3-1-202ENST00000523261 PRR26Q8N8Z3 221 aa8.48□□□□□ -1.05
NKX3-1-202ENST00000523261 NMES1Q9C002 83 aa8.48□□□□□ -1.05
NKX3-1-202ENST00000523261 SLIRPQ9GZT3 109 aaKnown RBP8.48□□□□□ -1.05
NKX3-1-202ENST00000523261 RSL24D1Q9UHA3 163 aaKnown RBP8.48□□□□□ -1.05
NKX3-1-202ENST00000523261 IGLV10-54A0A075B6I4 117 aa8.47□□□□□ -1.05
NKX3-1-202ENST00000523261 RHODO00212 210 aa8.47□□□□□ -1.05
NKX3-1-202ENST00000523261 BCAP31P51572 246 aa8.47□□□□□ -1.05
NKX3-1-202ENST00000523261 CACNG7P62955 275 aa8.47□□□□□ -1.05
NKX3-1-202ENST00000523261 SPANXN2Q5MJ10 180 aa8.47□□□□□ -1.05
NKX3-1-202ENST00000523261 NPCDR1Q9BY65 106 aa8.47□□□□□ -1.05
NKX3-1-202ENST00000523261 UBE2L3P68036 154 aaKnown RBP8.46□□□□□ -1.06
NKX3-1-202ENST00000523261 RPL36AP83881 106 aaKnown RBP8.46□□□□□ -1.06
NKX3-1-202ENST00000523261 RPL36ALQ969Q0 106 aaKnown RBP8.46□□□□□ -1.06
NKX3-1-202ENST00000523261 CHCHD5Q9BSY4 110 aa8.46□□□□□ -1.06
NKX3-1-202ENST00000523261 C11orf1Q9H5F2 150 aa8.46□□□□□ -1.06
NKX3-1-202ENST00000523261 TRBV7-3A0A075B6L6 115 aa8.45□□□□□ -1.06
NKX3-1-202ENST00000523261 TRBV10-1A0A0K0K1A3 114 aa8.45□□□□□ -1.06
NKX3-1-202ENST00000523261 PTTG1O95997 202 aa8.45□□□□□ -1.06
NKX3-1-202ENST00000523261 IFNA7P01567 189 aa8.45□□□□□ -1.06
NKX3-1-202ENST00000523261 S100A11P31949 105 aa8.45□□□□□ -1.06
NKX3-1-202ENST00000523261 S100A10P60903 97 aa8.45□□□□□ -1.06
NKX3-1-202ENST00000523261 PKIAP61925 76 aa8.45□□□□□ -1.06
NKX3-1-202ENST00000523261 RBX1P62877 108 aa8.45□□□□□ -1.06
NKX3-1-202ENST00000523261 FAM74A4Q5TZK3 123 aa8.45□□□□□ -1.06
NKX3-1-202ENST00000523261 TRIM63Q969Q1 353 aa8.45□□□□□ -1.06
NKX3-1-202ENST00000523261 OTORQ9NRC9 128 aa8.45□□□□□ -1.06
NKX3-1-202ENST00000523261 A0A096LNI7 61 aa8.44□□□□□ -1.06
NKX3-1-202ENST00000523261 GCGP01275 180 aa8.44□□□□□ -1.06
NKX3-1-202ENST00000523261 CMTM2Q8TAZ6 248 aa8.44□□□□□ -1.06
NKX3-1-202ENST00000523261 LYRM2Q9NU23 88 aaPredicted RBP8.44□□□□□ -1.06
NKX3-1-202ENST00000523261 RPS10P46783 165 aaKnown RBP8.43□□□□□ -1.06
NKX3-1-202ENST00000523261 SULT1A1P50225 295 aa8.43□□□□□ -1.06
NKX3-1-202ENST00000523261 AP3S2P59780 193 aa8.43□□□□□ -1.06
NKX3-1-202ENST00000523261 TOMM5Q8N4H5 51 aa8.43□□□□□ -1.06
NKX3-1-202ENST00000523261 ARL6IP6Q8N6S5 226 aa8.43□□□□□ -1.06
NKX3-1-202ENST00000523261 SGK494Q96LW2 274 aa8.43□□□□□ -1.06
NKX3-1-202ENST00000523261 NDFIP1Q9BT67 221 aa8.43□□□□□ -1.06
NKX3-1-202ENST00000523261 OR5AC2Q9NZP5 309 aa8.43□□□□□ -1.06
NKX3-1-202ENST00000523261 LSM5Q9Y4Y9 91 aaKnown RBP8.43□□□□□ -1.06
NKX3-1-202ENST00000523261 IGSF23A1L1A6 192 aa8.42□□□□□ -1.06
NKX3-1-202ENST00000523261 S100A4P26447 101 aaKnown RBP8.42□□□□□ -1.06
NKX3-1-202ENST00000523261 OR10G8Q8NGN5 311 aa8.42□□□□□ -1.06
NKX3-1-202ENST00000523261 IGKV3D-20A0A0C4DH25 116 aa8.41□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 97.9 ms