RNA–Protein interactions for RNA: ENST00000521640.5

CTNNA1-228, Transcript of catenin alpha 1, humanhuman

TSL 4

Gene CTNNA1, Length 568 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-228ENST00000521640 SYNJ2BPP57105 145 aa5□□□□□ -1.61
CTNNA1-228ENST00000521640 RPL32P62910 135 aaKnown RBP5□□□□□ -1.61
CTNNA1-228ENST00000521640 KRTAP1-1Q07627 177 aa5□□□□□ -1.61
CTNNA1-228ENST00000521640 SPANXN1Q5VSR9 72 aa5□□□□□ -1.61
CTNNA1-228ENST00000521640 LINC01545Q5VT33 79 aa5□□□□□ -1.61
CTNNA1-228ENST00000521640 C10orf99Q6UWK7 81 aa5□□□□□ -1.61
CTNNA1-228ENST00000521640 LURAP1LQ8IV03 231 aa5□□□□□ -1.61
CTNNA1-228ENST00000521640 C2orf88Q9BSF0 95 aa5□□□□□ -1.61
CTNNA1-228ENST00000521640 KRTAP4-5Q9BYR2 181 aa5□□□□□ -1.61
CTNNA1-228ENST00000521640 PRO1933Q9H354 126 aa5□□□□□ -1.61
CTNNA1-228ENST00000521640 DPH3P1Q9H4G8 78 aa5□□□□□ -1.61
CTNNA1-228ENST00000521640 ST20Q9HBF5 79 aa5□□□□□ -1.61
CTNNA1-228ENST00000521640 UQCR10Q9UDW1 63 aa5□□□□□ -1.61
CTNNA1-228ENST00000521640 KMT2BQ9UMN6 2715 aaPredicted RBP5□□□□□ -1.61
CTNNA1-228ENST00000521640 CSPG4Q6UVK1 2322 aa5□□□□□ -1.61
CTNNA1-228ENST00000521640 A0A096LNJ9 63 aa4.99□□□□□ -1.61
CTNNA1-228ENST00000521640 TNFRSF6BO95407 300 aa4.99□□□□□ -1.61
CTNNA1-228ENST00000521640 S100A4P26447 101 aaKnown RBP4.99□□□□□ -1.61
CTNNA1-228ENST00000521640 FHL3Q13643 280 aa4.99□□□□□ -1.61
CTNNA1-228ENST00000521640 LGALS9BQ3B8N2 356 aa4.99□□□□□ -1.61
CTNNA1-228ENST00000521640 SPATA45Q537H7 98 aa4.99□□□□□ -1.61
CTNNA1-228ENST00000521640 PIK3CD-AS1Q5SR53 167 aa4.99□□□□□ -1.61
CTNNA1-228ENST00000521640 LGALS9CQ6DKI2 356 aa4.99□□□□□ -1.61
CTNNA1-228ENST00000521640 Q6ZSV7 163 aa4.99□□□□□ -1.61
CTNNA1-228ENST00000521640 Q8N8P6 123 aa4.99□□□□□ -1.61
CTNNA1-228ENST00000521640 OR9G4Q8NGQ1 327 aa4.99□□□□□ -1.61
CTNNA1-228ENST00000521640 AP1S3Q96PC3 154 aa4.99□□□□□ -1.61
CTNNA1-228ENST00000521640 C20orf78Q9BR46 151 aa4.99□□□□□ -1.61
CTNNA1-228ENST00000521640 IGLV2-18A0A075B6J9 118 aa4.98□□□□□ -1.61
CTNNA1-228ENST00000521640 OR4C46A6NHA9 309 aa4.98□□□□□ -1.61
CTNNA1-228ENST00000521640 H3BVH4 76 aa4.98□□□□□ -1.61
CTNNA1-228ENST00000521640 NDUFA7O95182 113 aa4.98□□□□□ -1.61
CTNNA1-228ENST00000521640 IGLC3P0DOY3 106 aa4.98□□□□□ -1.61
CTNNA1-228ENST00000521640 RNASE3P12724 160 aaKnown RBP4.98□□□□□ -1.61
CTNNA1-228ENST00000521640 G0S2P27469 103 aa4.98□□□□□ -1.61
CTNNA1-228ENST00000521640 FCER1GP30273 86 aa4.98□□□□□ -1.61
CTNNA1-228ENST00000521640 IFI27P40305 119 aaPredicted RBP4.98□□□□□ -1.61
CTNNA1-228ENST00000521640 CDKN1BP46527 198 aa4.98□□□□□ -1.61
CTNNA1-228ENST00000521640 ANXA2RQ3ZCQ2 193 aa4.98□□□□□ -1.61
CTNNA1-228ENST00000521640 TCTEX1D4Q5JR98 221 aa4.98□□□□□ -1.61
CTNNA1-228ENST00000521640 FAM159AQ6UWV7 190 aa4.98□□□□□ -1.61
CTNNA1-228ENST00000521640 ZNF705AQ6ZN79 300 aaPredicted RBP4.98□□□□□ -1.61
CTNNA1-228ENST00000521640 NRACQ8N912 160 aa4.98□□□□□ -1.61
CTNNA1-228ENST00000521640 OR1N2Q8NGR9 330 aa4.98□□□□□ -1.61
CTNNA1-228ENST00000521640 OR2K2Q8NGT1 345 aa4.98□□□□□ -1.61
CTNNA1-228ENST00000521640 PTH2Q96A98 100 aa4.98□□□□□ -1.61
CTNNA1-228ENST00000521640 SPAG8Q99932 426 aaPredicted RBP4.98□□□□□ -1.61
CTNNA1-228ENST00000521640 LINC00467Q9BRT7 94 aa4.98□□□□□ -1.61
CTNNA1-228ENST00000521640 MSRB1Q9NZV6 116 aa4.98□□□□□ -1.61
CTNNA1-228ENST00000521640 PAM16Q9Y3D7 125 aa4.98□□□□□ -1.61
CTNNA1-228ENST00000521640 PHLDA3Q9Y5J5 127 aa4.98□□□□□ -1.61
CTNNA1-228ENST00000521640 TRGV11A0A075B6L2 103 aa4.97□□□□□ -1.61
CTNNA1-228ENST00000521640 HSBP1L1C9JCN9 74 aa4.97□□□□□ -1.61
CTNNA1-228ENST00000521640 F6UB75 175 aa4.97□□□□□ -1.61
CTNNA1-228ENST00000521640 M0R143 59 aa4.97□□□□□ -1.61
CTNNA1-228ENST00000521640 ATP5LO75964 103 aa4.97□□□□□ -1.61
CTNNA1-228ENST00000521640 CSN3P07498 182 aa4.97□□□□□ -1.61
CTNNA1-228ENST00000521640 ZNF688P0C7X2 276 aa4.97□□□□□ -1.61
CTNNA1-228ENST00000521640 HLA-DRB4P13762 266 aa4.97□□□□□ -1.61
CTNNA1-228ENST00000521640 EVI2AP22794 236 aa4.97□□□□□ -1.61
CTNNA1-228ENST00000521640 RNASE4P34096 147 aaKnown RBP4.97□□□□□ -1.61
CTNNA1-228ENST00000521640 CMC4P56277 68 aaPredicted RBP4.97□□□□□ -1.61
CTNNA1-228ENST00000521640 HILS1P60008 231 aa4.97□□□□□ -1.61
CTNNA1-228ENST00000521640 AMTNQ6UX39 209 aa4.97□□□□□ -1.61
CTNNA1-228ENST00000521640 ADAMTSL5Q6ZMM2 481 aa4.97□□□□□ -1.61
CTNNA1-228ENST00000521640 OR11H1Q8NG94 326 aa4.97□□□□□ -1.61
CTNNA1-228ENST00000521640 ZNF418Q8TF45 676 aaPredicted RBP4.97□□□□□ -1.61
CTNNA1-228ENST00000521640 C9orf85Q96MD7 179 aa4.97□□□□□ -1.61
CTNNA1-228ENST00000521640 PMCHL2Q9BQD1 86 aa4.97□□□□□ -1.61
CTNNA1-228ENST00000521640 MRPS16Q9Y3D3 137 aaKnown RBP4.97□□□□□ -1.61
CTNNA1-228ENST00000521640 HLA-DRB4X5D2U9 266 aa4.97□□□□□ -1.61
CTNNA1-228ENST00000521640 ASH1LQ9NR48 2969 aaKnown RBP4.97□□□□□ -1.61
CTNNA1-228ENST00000521640 IGHV1OR15-1A0A075B7D0 117 aa4.96□□□□□ -1.62
CTNNA1-228ENST00000521640 NCR2O95944 276 aa4.96□□□□□ -1.62
CTNNA1-228ENST00000521640 PRB4P10163 310 aaPredicted RBP4.96□□□□□ -1.62
CTNNA1-228ENST00000521640 EDN2P20800 178 aa4.96□□□□□ -1.62
CTNNA1-228ENST00000521640 ORMDL2Q53FV1 153 aa4.96□□□□□ -1.62
CTNNA1-228ENST00000521640 KLHL30-AS1Q8NEE0 82 aa4.96□□□□□ -1.62
CTNNA1-228ENST00000521640 DYNLRB2Q8TF09 96 aa4.96□□□□□ -1.62
CTNNA1-228ENST00000521640 IFI27L1Q96BM0 104 aa4.96□□□□□ -1.62
CTNNA1-228ENST00000521640 FAM110AQ9BQ89 295 aa4.96□□□□□ -1.62
CTNNA1-228ENST00000521640 SMIM2Q9BVW6 85 aa4.96□□□□□ -1.62
CTNNA1-228ENST00000521640 EDA2RQ9HAV5 297 aa4.96□□□□□ -1.62
CTNNA1-228ENST00000521640 TSSC4Q9Y5U2 329 aaPredicted RBP4.96□□□□□ -1.62
CTNNA1-228ENST00000521640 KIF25-AS1Q9Y6Z4 181 aa4.96□□□□□ -1.62
CTNNA1-228ENST00000521640 UTP20O75691 2785 aaKnown RBP4.96□□□□□ -1.62
CTNNA1-228ENST00000521640 IGKV3-7A0A075B6H7 116 aa4.95□□□□□ -1.62
CTNNA1-228ENST00000521640 IGHV3-16A0A0C4DH30 117 aa4.95□□□□□ -1.62
CTNNA1-228ENST00000521640 MUC21A0A0G2JKD1 596 aa4.95□□□□□ -1.62
CTNNA1-228ENST00000521640 TRBV6-5A0A0K0K1A5 114 aa4.95□□□□□ -1.62
CTNNA1-228ENST00000521640 MUC21A0A140T8X8 626 aa4.95□□□□□ -1.62
CTNNA1-228ENST00000521640 LOC389332A0A1B0GUA5 103 aa4.95□□□□□ -1.62
CTNNA1-228ENST00000521640 SMKR1H3BMG3 65 aa4.95□□□□□ -1.62
CTNNA1-228ENST00000521640 H3BMM0 161 aa4.95□□□□□ -1.62
CTNNA1-228ENST00000521640 TCAPO15273 167 aa4.95□□□□□ -1.62
CTNNA1-228ENST00000521640 SLPIP03973 132 aa4.95□□□□□ -1.62
CTNNA1-228ENST00000521640 IGLL1P15814 213 aa4.95□□□□□ -1.62
CTNNA1-228ENST00000521640 SRD5A1P18405 259 aa4.95□□□□□ -1.62
CTNNA1-228ENST00000521640 SUMO2P61956 95 aaKnown RBP4.95□□□□□ -1.62
CTNNA1-228ENST00000521640 LAGE3Q14657 143 aa4.95□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms