RNA–Protein interactions for RNA: ENST00000521340.1

HMGN1P28-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 28, humanhuman

BASIC

Gene HMGN1P28, Length 364 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P28-201ENST00000521340 OR5A2Q8NGI9 324 aa1.59□□□□□ -2.15
HMGN1P28-201ENST00000521340 RNASE11Q8TAA1 199 aaKnown RBP1.59□□□□□ -2.15
HMGN1P28-201ENST00000521340 NEK7Q8TDX7 302 aa1.59□□□□□ -2.15
HMGN1P28-201ENST00000521340 OR8B2Q96RD0 313 aa1.59□□□□□ -2.15
HMGN1P28-201ENST00000521340 SMIM7Q9BQ49 75 aa1.59□□□□□ -2.15
HMGN1P28-201ENST00000521340 DDA1Q9BW61 102 aa1.59□□□□□ -2.15
HMGN1P28-201ENST00000521340 NPCDR1Q9BY65 106 aa1.59□□□□□ -2.15
HMGN1P28-201ENST00000521340 OR51I2Q9H344 312 aa1.59□□□□□ -2.15
HMGN1P28-201ENST00000521340 HES4Q9HCC6 221 aa1.59□□□□□ -2.15
HMGN1P28-201ENST00000521340 GNG13Q9P2W3 67 aa1.59□□□□□ -2.15
HMGN1P28-201ENST00000521340 KLK5Q9Y337 293 aaPredicted RBP1.59□□□□□ -2.15
HMGN1P28-201ENST00000521340 WASHC3Q9Y3C0 194 aa1.59□□□□□ -2.15
HMGN1P28-201ENST00000521340 A0A0C4DFX4 3053 aa1.59□□□□□ -2.16
HMGN1P28-201ENST00000521340 USP34Q70CQ2 3546 aa1.59□□□□□ -2.16
HMGN1P28-201ENST00000521340 LAMA2P24043 3122 aaKnown RBP1.58□□□□□ -2.16
HMGN1P28-201ENST00000521340 ABCA2Q9BZC7 2435 aa1.58□□□□□ -2.16
HMGN1P28-201ENST00000521340 RANBP2P49792 3224 aaKnown RBP1.58□□□□□ -2.16
HMGN1P28-201ENST00000521340 TRBV20OR9-2A0A075B6H5 130 aa1.58□□□□□ -2.16
HMGN1P28-201ENST00000521340 TRAV9-1A0A075B6T8 112 aa1.58□□□□□ -2.16
HMGN1P28-201ENST00000521340 IGKV2-24A0A0C4DH68 120 aa1.58□□□□□ -2.16
HMGN1P28-201ENST00000521340 TMEM30CPA0ZSE6 113 aa1.58□□□□□ -2.16
HMGN1P28-201ENST00000521340 ODAMA1E959 279 aa1.58□□□□□ -2.16
HMGN1P28-201ENST00000521340 C5orf49A4QMS7 147 aa1.58□□□□□ -2.16
HMGN1P28-201ENST00000521340 A8MWP6 167 aa1.58□□□□□ -2.16
HMGN1P28-201ENST00000521340 IQCF6A8MYZ5 107 aa1.58□□□□□ -2.16
HMGN1P28-201ENST00000521340 C9JCJ5 164 aa1.58□□□□□ -2.16
HMGN1P28-201ENST00000521340 F6UZH7 168 aa1.58□□□□□ -2.16
HMGN1P28-201ENST00000521340 H7BYZ3 331 aa1.58□□□□□ -2.16
HMGN1P28-201ENST00000521340 YPEL1O60688 119 aa1.58□□□□□ -2.16
HMGN1P28-201ENST00000521340 ZNF737O75373 536 aa1.58□□□□□ -2.16
HMGN1P28-201ENST00000521340 S1PR2O95136 353 aa1.58□□□□□ -2.16
HMGN1P28-201ENST00000521340 OR2H2O95918 312 aa1.58□□□□□ -2.16
HMGN1P28-201ENST00000521340 IGLV6-57P01721 117 aa1.58□□□□□ -2.16
HMGN1P28-201ENST00000521340 GYPAP02724 150 aa1.58□□□□□ -2.16
HMGN1P28-201ENST00000521340 ESDP10768 282 aa1.58□□□□□ -2.16
HMGN1P28-201ENST00000521340 DEFA4P12838 97 aa1.58□□□□□ -2.16
HMGN1P28-201ENST00000521340 CCL4P13236 92 aa1.58□□□□□ -2.16
HMGN1P28-201ENST00000521340 NPPCP23582 126 aa1.58□□□□□ -2.16
HMGN1P28-201ENST00000521340 S100GP29377 79 aa1.58□□□□□ -2.16
HMGN1P28-201ENST00000521340 SRP14P37108 136 aaKnown RBP1.58□□□□□ -2.16
HMGN1P28-201ENST00000521340 ATP5G3P48201 142 aa1.58□□□□□ -2.16
HMGN1P28-201ENST00000521340 CEBPGP53567 150 aa1.58□□□□□ -2.16
HMGN1P28-201ENST00000521340 RPL30P62888 115 aaKnown RBP1.58□□□□□ -2.16
HMGN1P28-201ENST00000521340 GNG3P63215 75 aa1.58□□□□□ -2.16
HMGN1P28-201ENST00000521340 CATR1Q13166 79 aa1.58□□□□□ -2.16
HMGN1P28-201ENST00000521340 IQCJQ1A5X6 159 aa1.58□□□□□ -2.16
HMGN1P28-201ENST00000521340 SAPCD1Q5SSQ6 148 aa1.58□□□□□ -2.16
HMGN1P28-201ENST00000521340 C1orf194Q5T5A4 169 aa1.58□□□□□ -2.16
HMGN1P28-201ENST00000521340 Q8IYB0 196 aa1.58□□□□□ -2.16
HMGN1P28-201ENST00000521340 TCTEX1D1Q8N7M0 179 aa1.58□□□□□ -2.16
HMGN1P28-201ENST00000521340 OR10J5Q8NHC4 309 aa1.58□□□□□ -2.16
HMGN1P28-201ENST00000521340 CT55Q8WUE5 264 aa1.58□□□□□ -2.16
HMGN1P28-201ENST00000521340 PSMF1Q92530 271 aa1.58□□□□□ -2.16
HMGN1P28-201ENST00000521340 BTF3L4Q96K17 158 aa1.58□□□□□ -2.16
HMGN1P28-201ENST00000521340 YPEL2Q96QA6 119 aa1.58□□□□□ -2.16
HMGN1P28-201ENST00000521340 IMMP2LQ96T52 175 aa1.58□□□□□ -2.16
HMGN1P28-201ENST00000521340 RTL8AQ9BWD3 113 aa1.58□□□□□ -2.16
HMGN1P28-201ENST00000521340 TTTY12Q9BZ98 90 aa1.58□□□□□ -2.16
HMGN1P28-201ENST00000521340 PRO1933Q9H354 126 aa1.58□□□□□ -2.16
HMGN1P28-201ENST00000521340 PSENENQ9NZ42 101 aa1.58□□□□□ -2.16
HMGN1P28-201ENST00000521340 BOKQ9UMX3 212 aaPredicted RBP1.58□□□□□ -2.16
HMGN1P28-201ENST00000521340 FUT9Q9Y231 359 aa1.58□□□□□ -2.16
HMGN1P28-201ENST00000521340 MPC1Q9Y5U8 109 aa1.58□□□□□ -2.16
HMGN1P28-201ENST00000521340 ARL2-SNX15V9GYD0 113 aa1.58□□□□□ -2.16
HMGN1P28-201ENST00000521340 APC2O95996 2303 aa1.58□□□□□ -2.16
HMGN1P28-201ENST00000521340 CNOT1A5YKK6 2376 aaKnown RBP1.58□□□□□ -2.16
HMGN1P28-201ENST00000521340 CACNA1HO95180 2353 aa1.58□□□□□ -2.16
HMGN1P28-201ENST00000521340 ABCA1O95477 2261 aa1.57□□□□□ -2.16
HMGN1P28-201ENST00000521340 WNK2Q9Y3S1 2297 aa1.57□□□□□ -2.16
HMGN1P28-201ENST00000521340 SZT2Q5T011 3432 aa1.57□□□□□ -2.16
HMGN1P28-201ENST00000521340 ROS1P08922 2347 aa1.57□□□□□ -2.16
HMGN1P28-201ENST00000521340 ACACAQ13085 2346 aa1.57□□□□□ -2.16
HMGN1P28-201ENST00000521340 SPTBN2O15020 2390 aa1.57□□□□□ -2.16
HMGN1P28-201ENST00000521340 CEP250Q9BV73 2442 aa1.57□□□□□ -2.16
HMGN1P28-201ENST00000521340 SPTBN5Q9NRC6 3674 aaKnown RBP1.57□□□□□ -2.16
HMGN1P28-201ENST00000521340 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP1.57□□□□□ -2.16
HMGN1P28-201ENST00000521340 TRAV8-1A0A0A6YYK1 113 aa1.57□□□□□ -2.16
HMGN1P28-201ENST00000521340 MDFIC2A0A1B0GVS7 189 aa1.57□□□□□ -2.16
HMGN1P28-201ENST00000521340 FNDC10F2Z333 226 aa1.57□□□□□ -2.16
HMGN1P28-201ENST00000521340 PDE6DO43924 150 aa1.57□□□□□ -2.16
HMGN1P28-201ENST00000521340 MRPL33O75394 65 aaKnown RBP1.57□□□□□ -2.16
HMGN1P28-201ENST00000521340 TNFSF15O95150 251 aa1.57□□□□□ -2.16
HMGN1P28-201ENST00000521340 HAND1O96004 215 aa1.57□□□□□ -2.16
HMGN1P28-201ENST00000521340 OR4A8P0C604 315 aa1.57□□□□□ -2.16
HMGN1P28-201ENST00000521340 OR10J4P0C629 311 aa1.57□□□□□ -2.16
HMGN1P28-201ENST00000521340 ARL14EPLP0DKL9 152 aa1.57□□□□□ -2.16
HMGN1P28-201ENST00000521340 G6PCP35575 357 aa1.57□□□□□ -2.16
HMGN1P28-201ENST00000521340 YPEL3P61236 119 aaPredicted RBP1.57□□□□□ -2.16
HMGN1P28-201ENST00000521340 ERVS71-1P61550 626 aa1.57□□□□□ -2.16
HMGN1P28-201ENST00000521340 TNFAIP6P98066 277 aaPredicted RBP1.57□□□□□ -2.16
HMGN1P28-201ENST00000521340 SPANXN5Q5MJ07 72 aa1.57□□□□□ -2.16
HMGN1P28-201ENST00000521340 FAM78BQ5VT40 261 aa1.57□□□□□ -2.16
HMGN1P28-201ENST00000521340 TCF24Q7RTU0 167 aa1.57□□□□□ -2.16
HMGN1P28-201ENST00000521340 C1orf158Q8N1D5 194 aa1.57□□□□□ -2.16
HMGN1P28-201ENST00000521340 TMEM86BQ8N661 226 aa1.57□□□□□ -2.16
HMGN1P28-201ENST00000521340 OR2T10Q8NGZ9 312 aa1.57□□□□□ -2.16
HMGN1P28-201ENST00000521340 CIB3Q96Q77 187 aaPredicted RBP1.57□□□□□ -2.16
HMGN1P28-201ENST00000521340 MGST2Q99735 147 aa1.57□□□□□ -2.16
HMGN1P28-201ENST00000521340 TXNDC17Q9BRA2 123 aa1.57□□□□□ -2.16
HMGN1P28-201ENST00000521340 DERL1Q9BUN8 251 aa1.57□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms