RNA–Protein interactions for RNA: ENST00000519684.5

HMGB4-203, Transcript of high mobility group box 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGB4, Length 2,343 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB4-203ENST00000519684 CSMD2Q7Z408 3487 aa6.3□□□□□ -1.4
HMGB4-203ENST00000519684 NAV2Q8IVL1 2488 aa6.3□□□□□ -1.4
HMGB4-203ENST00000519684 TRAV26-2A0A0B4J265 109 aa6.3□□□□□ -1.4
HMGB4-203ENST00000519684 MGPP08493 103 aa6.3□□□□□ -1.4
HMGB4-203ENST00000519684 CD7P09564 240 aa6.3□□□□□ -1.4
HMGB4-203ENST00000519684 SMIM17P0DL12 118 aa6.3□□□□□ -1.4
HMGB4-203ENST00000519684 FCER1GP30273 86 aa6.3□□□□□ -1.4
HMGB4-203ENST00000519684 CDKN1BP46527 198 aa6.3□□□□□ -1.4
HMGB4-203ENST00000519684 FXYD7P58549 80 aa6.3□□□□□ -1.4
HMGB4-203ENST00000519684 NRACQ8N912 160 aa6.3□□□□□ -1.4
HMGB4-203ENST00000519684 IFI27L1Q96BM0 104 aa6.3□□□□□ -1.4
HMGB4-203ENST00000519684 USP9YO00507 2555 aaPredicted RBP6.29□□□□□ -1.4
HMGB4-203ENST00000519684 CENPEQ02224 2701 aa6.29□□□□□ -1.4
HMGB4-203ENST00000519684 TRAV2A0A0B4J234 112 aa6.29□□□□□ -1.4
HMGB4-203ENST00000519684 hDV102S1A0JD36 115 aa6.29□□□□□ -1.4
HMGB4-203ENST00000519684 RNASE3P12724 160 aaKnown RBP6.29□□□□□ -1.4
HMGB4-203ENST00000519684 C14orf178Q8N769 122 aaPredicted RBP6.29□□□□□ -1.4
HMGB4-203ENST00000519684 MCRIP2Q9BUT9 160 aaKnown RBP6.29□□□□□ -1.4
HMGB4-203ENST00000519684 GOLT1BQ9Y3E0 138 aa6.29□□□□□ -1.4
HMGB4-203ENST00000519684 SPRY2O43597 315 aa6.28□□□□□ -1.4
HMGB4-203ENST00000519684 LGALS9BQ3B8N2 356 aa6.28□□□□□ -1.4
HMGB4-203ENST00000519684 LGALS9CQ6DKI2 356 aa6.28□□□□□ -1.4
HMGB4-203ENST00000519684 ADAMTSL5Q6ZMM2 481 aa6.28□□□□□ -1.4
HMGB4-203ENST00000519684 CLUHP3Q96NS8 147 aa6.28□□□□□ -1.4
HMGB4-203ENST00000519684 DUX3Q96PT4 197 aa6.28□□□□□ -1.4
HMGB4-203ENST00000519684 PMCHL2Q9BQD1 86 aa6.28□□□□□ -1.4
HMGB4-203ENST00000519684 PTPN13Q12923 2485 aa6.28□□□□□ -1.4
HMGB4-203ENST00000519684 APCP25054 2843 aa6.28□□□□□ -1.4
HMGB4-203ENST00000519684 TRAV12-2A0A075B6T6 113 aa6.28□□□□□ -1.4
HMGB4-203ENST00000519684 A0A1B0GV90 55 aa6.28□□□□□ -1.4
HMGB4-203ENST00000519684 NXPH4O95158 308 aa6.28□□□□□ -1.4
HMGB4-203ENST00000519684 PPP1R17O96001 155 aa6.28□□□□□ -1.4
HMGB4-203ENST00000519684 LAGE3Q14657 143 aa6.28□□□□□ -1.4
HMGB4-203ENST00000519684 BATFQ16520 125 aa6.28□□□□□ -1.4
HMGB4-203ENST00000519684 SPINK13Q1W4C9 94 aa6.28□□□□□ -1.4
HMGB4-203ENST00000519684 DEFB125Q8N687 156 aa6.28□□□□□ -1.4
HMGB4-203ENST00000519684 SYT8Q8NBV8 401 aa6.28□□□□□ -1.4
HMGB4-203ENST00000519684 DLX4Q92988 240 aaPredicted RBP6.28□□□□□ -1.4
HMGB4-203ENST00000519684 DEFB131AP59861 70 aa6.27□□□□□ -1.41
HMGB4-203ENST00000519684 KRTAP1-1Q07627 177 aa6.27□□□□□ -1.41
HMGB4-203ENST00000519684 TMEM158Q8WZ71 300 aa6.27□□□□□ -1.41
HMGB4-203ENST00000519684 C18orf15Q96N68 181 aa6.27□□□□□ -1.41
HMGB4-203ENST00000519684 SMIM2Q9BVW6 85 aa6.27□□□□□ -1.41
HMGB4-203ENST00000519684 ESM1Q9NQ30 184 aa6.27□□□□□ -1.41
HMGB4-203ENST00000519684 ABCA12Q86UK0 2595 aa6.27□□□□□ -1.41
HMGB4-203ENST00000519684 ZANQ9Y493 2812 aa6.27□□□□□ -1.41
HMGB4-203ENST00000519684 IGLV2-18A0A075B6J9 118 aa6.27□□□□□ -1.41
HMGB4-203ENST00000519684 IGHV1OR15-1A0A075B7D0 117 aa6.27□□□□□ -1.41
HMGB4-203ENST00000519684 C20orf78Q9BR46 151 aa6.27□□□□□ -1.41
HMGB4-203ENST00000519684 MRPS16Q9Y3D3 137 aaKnown RBP6.27□□□□□ -1.41
HMGB4-203ENST00000519684 TENM4Q6N022 2769 aa6.26□□□□□ -1.41
HMGB4-203ENST00000519684 TRGV11A0A075B6L2 103 aa6.26□□□□□ -1.41
HMGB4-203ENST00000519684 IGHV3-16A0A0C4DH30 117 aa6.26□□□□□ -1.41
HMGB4-203ENST00000519684 A0A1W2PRX2 142 aa6.26□□□□□ -1.41
HMGB4-203ENST00000519684 KNCNA6PVL3 124 aa6.26□□□□□ -1.41
HMGB4-203ENST00000519684 ATP5LO75964 103 aa6.26□□□□□ -1.41
HMGB4-203ENST00000519684 RNASE1P07998 156 aaKnown RBP6.26□□□□□ -1.41
HMGB4-203ENST00000519684 SUMO2P61956 95 aaKnown RBP6.26□□□□□ -1.41
HMGB4-203ENST00000519684 SLC25A34Q6PIV7 304 aa6.26□□□□□ -1.41
HMGB4-203ENST00000519684 TMEM61Q8N0U2 210 aa6.26□□□□□ -1.41
HMGB4-203ENST00000519684 ZNF418Q8TF45 676 aaPredicted RBP6.26□□□□□ -1.41
HMGB4-203ENST00000519684 TCAPO15273 167 aa6.26□□□□□ -1.41
HMGB4-203ENST00000519684 NUDT3O95989 172 aa6.26□□□□□ -1.41
HMGB4-203ENST00000519684 HLA-DRB4P13762 266 aa6.26□□□□□ -1.41
HMGB4-203ENST00000519684 ORMDL2Q53FV1 153 aa6.26□□□□□ -1.41
HMGB4-203ENST00000519684 RASL10AQ92737 203 aa6.26□□□□□ -1.41
HMGB4-203ENST00000519684 C9orf85Q96MD7 179 aa6.26□□□□□ -1.41
HMGB4-203ENST00000519684 HLA-DRB4X5D2U9 266 aa6.26□□□□□ -1.41
HMGB4-203ENST00000519684 DOPEY2Q9Y3R5 2298 aa6.25□□□□□ -1.41
HMGB4-203ENST00000519684 K7EMI3 77 aa6.25□□□□□ -1.41
HMGB4-203ENST00000519684 PRSS1P07477 247 aa6.25□□□□□ -1.41
HMGB4-203ENST00000519684 CD28P10747 220 aa6.25□□□□□ -1.41
HMGB4-203ENST00000519684 NUTF2P61970 127 aaKnown RBP6.25□□□□□ -1.41
HMGB4-203ENST00000519684 DEFB114Q30KQ6 69 aa6.25□□□□□ -1.41
HMGB4-203ENST00000519684 AMTNQ6UX39 209 aa6.25□□□□□ -1.41
HMGB4-203ENST00000519684 Q8N1Y9 231 aa6.25□□□□□ -1.41
HMGB4-203ENST00000519684 C11orf44Q8N8P7 122 aa6.25□□□□□ -1.41
HMGB4-203ENST00000519684 RAX2Q96IS3 184 aa6.25□□□□□ -1.41
HMGB4-203ENST00000519684 TEX15Q9BXT5 2789 aa6.25□□□□□ -1.41
HMGB4-203ENST00000519684 CREBBPQ92793 2442 aa6.25□□□□□ -1.41
HMGB4-203ENST00000519684 KMT2BQ9UMN6 2715 aaPredicted RBP6.25□□□□□ -1.41
HMGB4-203ENST00000519684 CBY3A6NI87 242 aa6.25□□□□□ -1.41
HMGB4-203ENST00000519684 F5H697 171 aa6.25□□□□□ -1.41
HMGB4-203ENST00000519684 COL5A1-AS1Q5SY13 56 aa6.25□□□□□ -1.41
HMGB4-203ENST00000519684 POM121L12Q8N7R1 296 aa6.25□□□□□ -1.41
HMGB4-203ENST00000519684 RPL39LQ96EH5 51 aaKnown RBP6.25□□□□□ -1.41
HMGB4-203ENST00000519684 SPAG8Q99932 426 aaPredicted RBP6.25□□□□□ -1.41
HMGB4-203ENST00000519684 C16orf95Q9H693 158 aa6.25□□□□□ -1.41
HMGB4-203ENST00000519684 TSSC4Q9Y5U2 329 aaPredicted RBP6.25□□□□□ -1.41
HMGB4-203ENST00000519684 TRAV25A0A0B4J276 109 aa6.24□□□□□ -1.41
HMGB4-203ENST00000519684 A4D1N5 150 aa6.24□□□□□ -1.41
HMGB4-203ENST00000519684 H3BMM0 161 aa6.24□□□□□ -1.41
HMGB4-203ENST00000519684 CCL24O00175 119 aa6.24□□□□□ -1.41
HMGB4-203ENST00000519684 HIST2H2BDQ6DRA6 164 aa6.24□□□□□ -1.41
HMGB4-203ENST00000519684 MAP6D1Q9H9H5 199 aa6.24□□□□□ -1.41
HMGB4-203ENST00000519684 MDFICQ9P1T7 246 aa6.24□□□□□ -1.41
HMGB4-203ENST00000519684 MXRA5Q9NR99 2828 aa6.24□□□□□ -1.41
HMGB4-203ENST00000519684 ITPR3Q14573 2671 aa6.24□□□□□ -1.41
HMGB4-203ENST00000519684 A0A087WWL8 130 aa6.24□□□□□ -1.41
HMGB4-203ENST00000519684 A8MTW9 85 aa6.24□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms