RNA–Protein interactions for RNA: ENST00000519254.2

CLN8-204, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLN8, Length 1,769 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-204ENST00000519254 A8MTW9 85 aa10.68□□□□□ -0.7
CLN8-204ENST00000519254 RIPPLY3P57055 190 aa10.68□□□□□ -0.7
CLN8-204ENST00000519254 DNLZQ5SXM8 178 aa10.68□□□□□ -0.7
CLN8-204ENST00000519254 Q6ZWC4 215 aa10.68□□□□□ -0.7
CLN8-204ENST00000519254 RNF185Q96GF1 192 aa10.68□□□□□ -0.7
CLN8-204ENST00000519254 TRAV12-2A0A075B6T6 113 aa10.67□□□□□ -0.7
CLN8-204ENST00000519254 OR11H12B2RN74 326 aa10.67□□□□□ -0.7
CLN8-204ENST00000519254 D6R8Y8 96 aa10.67□□□□□ -0.7
CLN8-204ENST00000519254 CD7P09564 240 aa10.67□□□□□ -0.7
CLN8-204ENST00000519254 ASIPP42127 132 aa10.67□□□□□ -0.7
CLN8-204ENST00000519254 AMTP48728 403 aa10.67□□□□□ -0.7
CLN8-204ENST00000519254 CACNG7P62955 275 aa10.67□□□□□ -0.7
CLN8-204ENST00000519254 SPINK13Q1W4C9 94 aa10.67□□□□□ -0.7
CLN8-204ENST00000519254 RNASEKQ6P5S7 137 aaKnown RBP10.67□□□□□ -0.7
CLN8-204ENST00000519254 FAM19A2Q8N3H0 131 aa10.67□□□□□ -0.7
CLN8-204ENST00000519254 H3BMM0 161 aa10.67□□□□□ -0.7
CLN8-204ENST00000519254 RNASE3P12724 160 aaKnown RBP10.67□□□□□ -0.7
CLN8-204ENST00000519254 HLA-DRB4P13762 266 aa10.67□□□□□ -0.7
CLN8-204ENST00000519254 RAB4AP20338 218 aa10.67□□□□□ -0.7
CLN8-204ENST00000519254 PMCHP20382 165 aa10.67□□□□□ -0.7
CLN8-204ENST00000519254 TSPOP30536 169 aa10.67□□□□□ -0.7
CLN8-204ENST00000519254 CDKN1BP46527 198 aa10.67□□□□□ -0.7
CLN8-204ENST00000519254 SCRT2Q9NQ03 307 aa10.67□□□□□ -0.7
CLN8-204ENST00000519254 TIMM8BQ9Y5J9 83 aaPredicted RBP10.67□□□□□ -0.7
CLN8-204ENST00000519254 HLA-DRB4X5D2U9 266 aa10.67□□□□□ -0.7
CLN8-204ENST00000519254 SPRY2O43597 315 aa10.66□□□□□ -0.7
CLN8-204ENST00000519254 MED14OSP0DP75 135 aa10.66□□□□□ -0.7
CLN8-204ENST00000519254 BEAN1Q3B7T3 259 aa10.66□□□□□ -0.7
CLN8-204ENST00000519254 OXLD1Q5BKU9 147 aa10.66□□□□□ -0.7
CLN8-204ENST00000519254 WFDC10AQ9H1F0 79 aa10.66□□□□□ -0.7
CLN8-204ENST00000519254 TRRAPQ9Y4A5 3859 aa10.66□□□□□ -0.7
CLN8-204ENST00000519254 EVI2AP22794 236 aa10.65□□□□□ -0.7
CLN8-204ENST00000519254 S100A4P26447 101 aaKnown RBP10.65□□□□□ -0.7
CLN8-204ENST00000519254 TDRG1Q3Y452 100 aa10.65□□□□□ -0.7
CLN8-204ENST00000519254 SPANXN1Q5VSR9 72 aa10.65□□□□□ -0.7
CLN8-204ENST00000519254 FAM159AQ6UWV7 190 aa10.65□□□□□ -0.7
CLN8-204ENST00000519254 ORMDL3Q8N138 153 aa10.65□□□□□ -0.7
CLN8-204ENST00000519254 PRELID3AQ96N28 172 aa10.65□□□□□ -0.7
CLN8-204ENST00000519254 RBMY1BA6NDE4 496 aaKnown RBP10.65□□□□□ -0.71
CLN8-204ENST00000519254 RBMY1EA6NEQ0 496 aaKnown RBP10.65□□□□□ -0.71
CLN8-204ENST00000519254 SMKR1H3BMG3 65 aa10.65□□□□□ -0.71
CLN8-204ENST00000519254 HSBP1O75506 76 aa10.65□□□□□ -0.71
CLN8-204ENST00000519254 RBMY1DP0C7P1 496 aaKnown RBP10.65□□□□□ -0.71
CLN8-204ENST00000519254 LINC00614P0C842 121 aa10.65□□□□□ -0.71
CLN8-204ENST00000519254 CHCHD1Q96BP2 118 aaKnown RBP10.65□□□□□ -0.71
CLN8-204ENST00000519254 CKS2P33552 79 aa10.64□□□□□ -0.71
CLN8-204ENST00000519254 GTSCR1Q86UQ5 136 aa10.64□□□□□ -0.71
CLN8-204ENST00000519254 PCP4L1A6NKN8 68 aa10.63□□□□□ -0.71
CLN8-204ENST00000519254 GAS8-AS1O95177 125 aa10.63□□□□□ -0.71
CLN8-204ENST00000519254 NCR2O95944 276 aa10.63□□□□□ -0.71
CLN8-204ENST00000519254 FXYD7P58549 80 aa10.63□□□□□ -0.71
CLN8-204ENST00000519254 PHLDA3Q9Y5J5 127 aa10.63□□□□□ -0.71
CLN8-204ENST00000519254 NOTCH3Q9UM47 2321 aa10.63□□□□□ -0.71
CLN8-204ENST00000519254 M0R381 172 aa10.62□□□□□ -0.71
CLN8-204ENST00000519254 CRXO43186 299 aaPredicted RBP10.62□□□□□ -0.71
CLN8-204ENST00000519254 NPYP01303 97 aa10.62□□□□□ -0.71
CLN8-204ENST00000519254 CMC4P56277 68 aaPredicted RBP10.62□□□□□ -0.71
CLN8-204ENST00000519254 WIPF1O43516 503 aa10.62□□□□□ -0.71
CLN8-204ENST00000519254 NXPH4O95158 308 aa10.62□□□□□ -0.71
CLN8-204ENST00000519254 PPBPP02775 128 aa10.62□□□□□ -0.71
CLN8-204ENST00000519254 RBMY1A1P0DJD3 496 aaKnown RBP10.62□□□□□ -0.71
CLN8-204ENST00000519254 RBMY1CP0DJD4 496 aa10.62□□□□□ -0.71
CLN8-204ENST00000519254 RBMY1FQ15415 496 aaKnown RBP10.62□□□□□ -0.71
CLN8-204ENST00000519254 PMCHL1Q16048 86 aa10.62□□□□□ -0.71
CLN8-204ENST00000519254 SMIM15Q7Z3B0 74 aa10.62□□□□□ -0.71
CLN8-204ENST00000519254 STHQ8IWL8 128 aa10.62□□□□□ -0.71
CLN8-204ENST00000519254 C19orf73Q9NVV2 129 aa10.62□□□□□ -0.71
CLN8-204ENST00000519254 IGHV1OR15-1A0A075B7D0 117 aa10.61□□□□□ -0.71
CLN8-204ENST00000519254 IGHV3-16A0A0C4DH30 117 aa10.61□□□□□ -0.71
CLN8-204ENST00000519254 SCGB1D1O95968 90 aa10.61□□□□□ -0.71
CLN8-204ENST00000519254 IFI27P40305 119 aaPredicted RBP10.61□□□□□ -0.71
CLN8-204ENST00000519254 DEFB125Q8N687 156 aa10.61□□□□□ -0.71
CLN8-204ENST00000519254 GSN-AS1Q9NRJ2 163 aa10.61□□□□□ -0.71
CLN8-204ENST00000519254 IGHV1-24A0A0C4DH33 117 aa10.6□□□□□ -0.71
CLN8-204ENST00000519254 LOC389332A0A1B0GUA5 103 aa10.6□□□□□ -0.71
CLN8-204ENST00000519254 GATA1P15976 413 aaPredicted RBP10.6□□□□□ -0.71
CLN8-204ENST00000519254 Q8N1Y9 231 aa10.6□□□□□ -0.71
CLN8-204ENST00000519254 PRSS3P2Q8NHM4 247 aa10.6□□□□□ -0.71
CLN8-204ENST00000519254 C9orf85Q96MD7 179 aa10.6□□□□□ -0.71
CLN8-204ENST00000519254 FAM110AQ9BQ89 295 aa10.6□□□□□ -0.71
CLN8-204ENST00000519254 MDFICQ9P1T7 246 aa10.6□□□□□ -0.71
CLN8-204ENST00000519254 G3V4G9 280 aa10.6□□□□□ -0.71
CLN8-204ENST00000519254 KRTDAPP60985 99 aa10.6□□□□□ -0.71
CLN8-204ENST00000519254 CLUHP3Q96NS8 147 aa10.6□□□□□ -0.71
CLN8-204ENST00000519254 TNFRSF6BO95407 300 aa10.59□□□□□ -0.71
CLN8-204ENST00000519254 C3orf79P0CE67 100 aa10.59□□□□□ -0.71
CLN8-204ENST00000519254 RPL35AP18077 110 aaKnown RBP10.59□□□□□ -0.71
CLN8-204ENST00000519254 FA2HQ7L5A8 372 aa10.59□□□□□ -0.71
CLN8-204ENST00000519254 Q8N976 141 aa10.59□□□□□ -0.71
CLN8-204ENST00000519254 AP5S1Q9NUS5 200 aa10.59□□□□□ -0.71
CLN8-204ENST00000519254 LAMTOR2Q9Y2Q5 125 aa10.59□□□□□ -0.71
CLN8-204ENST00000519254 ANK2Q01484 3957 aa10.59□□□□□ -0.71
CLN8-204ENST00000519254 TRAV26-2A0A0B4J265 109 aa10.58□□□□□ -0.72
CLN8-204ENST00000519254 KRTAP10-11P60412 298 aa10.58□□□□□ -0.72
CLN8-204ENST00000519254 TRPT1Q86TN4 253 aaKnown RBP10.58□□□□□ -0.72
CLN8-204ENST00000519254 C14orf178Q8N769 122 aaPredicted RBP10.58□□□□□ -0.72
CLN8-204ENST00000519254 NRACQ8N912 160 aa10.57□□□□□ -0.72
CLN8-204ENST00000519254 DPH3P1Q9H4G8 78 aa10.57□□□□□ -0.72
CLN8-204ENST00000519254 LINC00173Q6ZV60 143 aa10.57□□□□□ -0.72
CLN8-204ENST00000519254 MAP1LC3AQ9H492 121 aa10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms