RNA–Protein interactions for RNA: ENST00000518678.1

TRAM1-202, Transcript of translocation associated membrane protein 1, humanhuman

TSL 4

Gene TRAM1, Length 535 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAM1-202ENST00000518678 GAGE7O76087 117 aa12.59□□□□□ -0.39
TRAM1-202ENST00000518678 ARMS2P0C7Q2 107 aa12.59□□□□□ -0.39
TRAM1-202ENST00000518678 GAGE12FP0CL80 117 aa12.59□□□□□ -0.39
TRAM1-202ENST00000518678 GAGE12GP0CL81 117 aa12.59□□□□□ -0.39
TRAM1-202ENST00000518678 GAGE12IP0CL82 117 aa12.59□□□□□ -0.39
TRAM1-202ENST00000518678 DEFB130BP0DP73 79 aa12.59□□□□□ -0.39
TRAM1-202ENST00000518678 DEFB130AP0DP74 79 aa12.59□□□□□ -0.39
TRAM1-202ENST00000518678 MED14OSP0DP75 135 aa12.59□□□□□ -0.39
TRAM1-202ENST00000518678 ADCYAP1P18509 176 aa12.59□□□□□ -0.39
TRAM1-202ENST00000518678 CASC10Q5T4H9 136 aa12.59□□□□□ -0.39
TRAM1-202ENST00000518678 ZFAND6Q6FIF0 208 aa12.59□□□□□ -0.39
TRAM1-202ENST00000518678 MUC7Q8TAX7 377 aa12.59□□□□□ -0.39
TRAM1-202ENST00000518678 SCRT2Q9NQ03 307 aa12.59□□□□□ -0.39
TRAM1-202ENST00000518678 OSTCQ9NRP0 149 aa12.59□□□□□ -0.39
TRAM1-202ENST00000518678 MRPL16Q9NX20 251 aaKnown RBP12.59□□□□□ -0.39
TRAM1-202ENST00000518678 F8W036 122 aa12.58□□□□□ -0.4
TRAM1-202ENST00000518678 Q6ZTC4 211 aa12.58□□□□□ -0.4
TRAM1-202ENST00000518678 RASL10AQ92737 203 aa12.58□□□□□ -0.4
TRAM1-202ENST00000518678 PTH2Q96A98 100 aa12.58□□□□□ -0.4
TRAM1-202ENST00000518678 GZMBP10144 247 aa12.57□□□□□ -0.4
TRAM1-202ENST00000518678 PNRC1Q12796 327 aaPredicted RBP12.57□□□□□ -0.4
TRAM1-202ENST00000518678 CT83Q5H943 113 aa12.57□□□□□ -0.4
TRAM1-202ENST00000518678 SFRP2Q96HF1 295 aa12.57□□□□□ -0.4
TRAM1-202ENST00000518678 C18orf15Q96N68 181 aa12.57□□□□□ -0.4
TRAM1-202ENST00000518678 SEC11CQ9BY50 192 aa12.57□□□□□ -0.4
TRAM1-202ENST00000518678 C3orf84H3BNL1 204 aa12.56□□□□□ -0.4
TRAM1-202ENST00000518678 SNAI2O43623 268 aa12.56□□□□□ -0.4
TRAM1-202ENST00000518678 OR5AL1P0C617 328 aa12.56□□□□□ -0.4
TRAM1-202ENST00000518678 IGLC6P0CF74 106 aa12.56□□□□□ -0.4
TRAM1-202ENST00000518678 ZNF876PQ49A33 203 aa12.56□□□□□ -0.4
TRAM1-202ENST00000518678 C15orf54Q8N8G6 183 aa12.56□□□□□ -0.4
TRAM1-202ENST00000518678 NDUFAF3Q9BU61 184 aa12.56□□□□□ -0.4
TRAM1-202ENST00000518678 SSBP4Q9BWG4 385 aaPredicted RBP12.56□□□□□ -0.4
TRAM1-202ENST00000518678 EPPK1P58107 5090 aaKnown RBP12.55□□□□□ -0.4
TRAM1-202ENST00000518678 TRGV2A0A075B6R0 118 aa12.55□□□□□ -0.4
TRAM1-202ENST00000518678 PIK3CD-AS1Q5SR53 167 aa12.55□□□□□ -0.4
TRAM1-202ENST00000518678 OR10G8Q8NGN5 311 aa12.55□□□□□ -0.4
TRAM1-202ENST00000518678 PHLDA3Q9Y5J5 127 aa12.55□□□□□ -0.4
TRAM1-202ENST00000518678 V9GYV3 84 aa12.55□□□□□ -0.4
TRAM1-202ENST00000518678 MUC4Q99102 2169 aa12.54□□□□□ -0.4
TRAM1-202ENST00000518678 TRAV10A0A0B4J240 114 aa12.54□□□□□ -0.4
TRAM1-202ENST00000518678 A8MWL6 223 aa12.54□□□□□ -0.4
TRAM1-202ENST00000518678 ATP5G1P05496 136 aa12.54□□□□□ -0.4
TRAM1-202ENST00000518678 C10orf91Q5T1B1 145 aa12.54□□□□□ -0.4
TRAM1-202ENST00000518678 FER1L6-AS1Q8NA97 138 aa12.54□□□□□ -0.4
TRAM1-202ENST00000518678 PHLDA1Q8WV24 401 aaPredicted RBP12.54□□□□□ -0.4
TRAM1-202ENST00000518678 A0A1W2PPQ1 181 aa12.53□□□□□ -0.4
TRAM1-202ENST00000518678 ZFP82Q8N141 532 aa12.53□□□□□ -0.4
TRAM1-202ENST00000518678 SYT8Q8NBV8 401 aa12.53□□□□□ -0.4
TRAM1-202ENST00000518678 F2Z2F3 143 aa12.52□□□□□ -0.41
TRAM1-202ENST00000518678 NXPH4O95158 308 aa12.52□□□□□ -0.41
TRAM1-202ENST00000518678 DMRTA1Q5VZB9 504 aa12.52□□□□□ -0.41
TRAM1-202ENST00000518678 OR10AG1Q8NH19 301 aa12.52□□□□□ -0.41
TRAM1-202ENST00000518678 TSKUQ8WUA8 353 aa12.52□□□□□ -0.41
TRAM1-202ENST00000518678 TPPP3Q9BW30 176 aa12.52□□□□□ -0.41
TRAM1-202ENST00000518678 DEFB131BA0A096LNP1 70 aa12.51□□□□□ -0.41
TRAM1-202ENST00000518678 TRAV4A0A0B4J268 109 aa12.51□□□□□ -0.41
TRAM1-202ENST00000518678 M0R381 172 aa12.51□□□□□ -0.41
TRAM1-202ENST00000518678 HTN3P15516 51 aa12.51□□□□□ -0.41
TRAM1-202ENST00000518678 CTRLP40313 264 aa12.51□□□□□ -0.41
TRAM1-202ENST00000518678 LYZL1Q6UWQ5 148 aa12.51□□□□□ -0.41
TRAM1-202ENST00000518678 POM121L12Q8N7R1 296 aa12.51□□□□□ -0.41
TRAM1-202ENST00000518678 GTSF1Q8WW33 167 aa12.51□□□□□ -0.41
TRAM1-202ENST00000518678 GFRA4Q9GZZ7 299 aa12.51□□□□□ -0.41
TRAM1-202ENST00000518678 CARHSP1Q9Y2V2 147 aaKnown RBP12.51□□□□□ -0.41
TRAM1-202ENST00000518678 FAM231BA6NCW3 169 aa12.5□□□□□ -0.41
TRAM1-202ENST00000518678 NUPR2A6NF83 97 aa12.5□□□□□ -0.41
TRAM1-202ENST00000518678 RS1O15537 224 aa12.5□□□□□ -0.41
TRAM1-202ENST00000518678 FOXA3P55318 350 aaPredicted RBP12.5□□□□□ -0.41
TRAM1-202ENST00000518678 NDUFA5Q16718 116 aa12.5□□□□□ -0.41
TRAM1-202ENST00000518678 SPANXN1Q5VSR9 72 aa12.5□□□□□ -0.41
TRAM1-202ENST00000518678 CEMP1Q6PRD7 247 aaPredicted RBP12.5□□□□□ -0.41
TRAM1-202ENST00000518678 SLC7A5P1Q8MH63 180 aa12.5□□□□□ -0.41
TRAM1-202ENST00000518678 ALMS1Q8TCU4 4167 aa12.49□□□□□ -0.41
TRAM1-202ENST00000518678 MUC21A0A0G2JKD1 596 aa12.49□□□□□ -0.41
TRAM1-202ENST00000518678 MUC21A0A140T8X8 626 aa12.49□□□□□ -0.41
TRAM1-202ENST00000518678 A8MWV9 139 aa12.49□□□□□ -0.41
TRAM1-202ENST00000518678 PPP1R2P9O14990 202 aa12.49□□□□□ -0.41
TRAM1-202ENST00000518678 IGHV3-53P01767 116 aa12.49□□□□□ -0.41
TRAM1-202ENST00000518678 CACNG7P62955 275 aa12.49□□□□□ -0.41
TRAM1-202ENST00000518678 RNF212Q495C1 297 aa12.49□□□□□ -0.41
TRAM1-202ENST00000518678 CFAP126Q5VTH2 177 aa12.49□□□□□ -0.41
TRAM1-202ENST00000518678 WDR73Q6P4I2 378 aa12.49□□□□□ -0.41
TRAM1-202ENST00000518678 OR4C5Q8NGB2 326 aa12.49□□□□□ -0.41
TRAM1-202ENST00000518678 ZNF479Q96JC4 524 aa12.49□□□□□ -0.41
TRAM1-202ENST00000518678 IGHV4-4A0A075B6R2 117 aa12.48□□□□□ -0.41
TRAM1-202ENST00000518678 F5H768 121 aa12.48□□□□□ -0.41
TRAM1-202ENST00000518678 MT-ND4LP03901 98 aa12.48□□□□□ -0.41
TRAM1-202ENST00000518678 HOXA5P20719 270 aa12.48□□□□□ -0.41
TRAM1-202ENST00000518678 ANAPC16Q96DE5 110 aa12.48□□□□□ -0.41
TRAM1-202ENST00000518678 CNFNQ9BYD5 112 aa12.48□□□□□ -0.41
TRAM1-202ENST00000518678 HIGD1CA8MV81 97 aa12.47□□□□□ -0.41
TRAM1-202ENST00000518678 CIDEAO60543 219 aa12.47□□□□□ -0.41
TRAM1-202ENST00000518678 PGLYRP4Q96LB8 373 aa12.47□□□□□ -0.41
TRAM1-202ENST00000518678 JPT2Q9H910 190 aa12.47□□□□□ -0.41
TRAM1-202ENST00000518678 SMIM27A0A1W2PRY6 76 aa12.46□□□□□ -0.41
TRAM1-202ENST00000518678 SSTP61278 116 aa12.46□□□□□ -0.41
TRAM1-202ENST00000518678 FHL2Q14192 279 aa12.46□□□□□ -0.41
TRAM1-202ENST00000518678 KLK5Q9Y337 293 aaPredicted RBP12.46□□□□□ -0.41
TRAM1-202ENST00000518678 UFSP1Q6NVU6 142 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 76.4 ms