RNA–Protein interactions for RNA: ENST00000517862.1

CPNE3-204, Transcript of copine 3, humanhuman

TSL 3

Gene CPNE3, Length 654 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-204ENST00000517862 SDIM1Q6ZPB5 146 aa1.66□□□□□ -2.14
CPNE3-204ENST00000517862 DAND5Q8N907 189 aa1.66□□□□□ -2.14
CPNE3-204ENST00000517862 TBX5Q99593 518 aa1.66□□□□□ -2.14
CPNE3-204ENST00000517862 C9orf16Q9BUW7 83 aa1.66□□□□□ -2.14
CPNE3-204ENST00000517862 PLAC8Q9NZF1 115 aa1.66□□□□□ -2.14
CPNE3-204ENST00000517862 FIS1Q9Y3D6 152 aa1.66□□□□□ -2.14
CPNE3-204ENST00000517862 MPC1Q9Y5U8 109 aa1.66□□□□□ -2.14
CPNE3-204ENST00000517862 R4GN34 69 aa1.66□□□□□ -2.14
CPNE3-204ENST00000517862 A0A1B0GWA3 101 aa1.65□□□□□ -2.15
CPNE3-204ENST00000517862 FUOMA2VDF0 154 aa1.65□□□□□ -2.15
CPNE3-204ENST00000517862 C19orf71A6NCJ1 209 aa1.65□□□□□ -2.15
CPNE3-204ENST00000517862 M0R135 149 aa1.65□□□□□ -2.15
CPNE3-204ENST00000517862 COX7A2LO14548 114 aa1.65□□□□□ -2.15
CPNE3-204ENST00000517862 DENRO43583 198 aaKnown RBP1.65□□□□□ -2.15
CPNE3-204ENST00000517862 PRM2P04554 102 aa1.65□□□□□ -2.15
CPNE3-204ENST00000517862 GZMMP51124 257 aa1.65□□□□□ -2.15
CPNE3-204ENST00000517862 FXYD7P58549 80 aa1.65□□□□□ -2.15
CPNE3-204ENST00000517862 TSPEAR-AS2P59090 65 aa1.65□□□□□ -2.15
CPNE3-204ENST00000517862 VBP1P61758 197 aa1.65□□□□□ -2.15
CPNE3-204ENST00000517862 GNG3P63215 75 aa1.65□□□□□ -2.15
CPNE3-204ENST00000517862 IL15RAQ13261 267 aa1.65□□□□□ -2.15
CPNE3-204ENST00000517862 BATFQ16520 125 aa1.65□□□□□ -2.15
CPNE3-204ENST00000517862 MRPL51Q4U2R6 128 aaKnown RBP1.65□□□□□ -2.15
CPNE3-204ENST00000517862 DPPA3Q6W0C5 159 aa1.65□□□□□ -2.15
CPNE3-204ENST00000517862 Q6ZQT7 251 aa1.65□□□□□ -2.15
CPNE3-204ENST00000517862 EIF4E3Q8N5X7 224 aaKnown RBP1.65□□□□□ -2.15
CPNE3-204ENST00000517862 ZNF680Q8NEM1 530 aa1.65□□□□□ -2.15
CPNE3-204ENST00000517862 BPIFB6Q8NFQ5 453 aa1.65□□□□□ -2.15
CPNE3-204ENST00000517862 LHFPL5Q8TAF8 219 aa1.65□□□□□ -2.15
CPNE3-204ENST00000517862 SFRP2Q96HF1 295 aa1.65□□□□□ -2.15
CPNE3-204ENST00000517862 CEP19Q96LK0 163 aa1.65□□□□□ -2.15
CPNE3-204ENST00000517862 SIGMAR1Q99720 223 aa1.65□□□□□ -2.15
CPNE3-204ENST00000517862 CYTL1Q9NRR1 136 aa1.65□□□□□ -2.15
CPNE3-204ENST00000517862 IDI2-AS1Q9NZ38 188 aa1.65□□□□□ -2.15
CPNE3-204ENST00000517862 ARL2BPQ9Y2Y0 163 aa1.65□□□□□ -2.15
CPNE3-204ENST00000517862 FAM236DA0A1B0GTK5 79 aa1.64□□□□□ -2.15
CPNE3-204ENST00000517862 ODAMA1E959 279 aa1.64□□□□□ -2.15
CPNE3-204ENST00000517862 OR4C45A6NMZ5 311 aa1.64□□□□□ -2.15
CPNE3-204ENST00000517862 GGTLC3B5MD39 225 aa1.64□□□□□ -2.15
CPNE3-204ENST00000517862 SLC22A1O15245 554 aa1.64□□□□□ -2.15
CPNE3-204ENST00000517862 SULT1B1O43704 296 aa1.64□□□□□ -2.15
CPNE3-204ENST00000517862 APOMO95445 188 aa1.64□□□□□ -2.15
CPNE3-204ENST00000517862 FAM236CP0DP71 79 aa1.64□□□□□ -2.15
CPNE3-204ENST00000517862 ZNF22P17026 224 aaPredicted RBP1.64□□□□□ -2.15
CPNE3-204ENST00000517862 SERPINB9P50453 376 aa1.64□□□□□ -2.15
CPNE3-204ENST00000517862 TAS2R45P59539 299 aa1.64□□□□□ -2.15
CPNE3-204ENST00000517862 RPS11P62280 158 aaKnown RBP eCLIP1.64□□□□□ -2.15
CPNE3-204ENST00000517862 HIST1H3AP68431 136 aa1.64□□□□□ -2.15
CPNE3-204ENST00000517862 RPL18Q07020 188 aaKnown RBP1.64□□□□□ -2.15
CPNE3-204ENST00000517862 FABP9Q0Z7S8 132 aa1.64□□□□□ -2.15
CPNE3-204ENST00000517862 SNCBQ16143 134 aa1.64□□□□□ -2.15
CPNE3-204ENST00000517862 LIN52Q52LA3 116 aa1.64□□□□□ -2.15
CPNE3-204ENST00000517862 RASL11AQ6T310 242 aa1.64□□□□□ -2.15
CPNE3-204ENST00000517862 LYZL2Q7Z4W2 148 aa1.64□□□□□ -2.15
CPNE3-204ENST00000517862 C9orf163Q8N9P6 203 aa1.64□□□□□ -2.15
CPNE3-204ENST00000517862 C1orf64Q8NEQ6 169 aa1.64□□□□□ -2.15
CPNE3-204ENST00000517862 OR10K1Q8NGX5 313 aa1.64□□□□□ -2.15
CPNE3-204ENST00000517862 ATP6V0E2Q8NHE4 81 aa1.64□□□□□ -2.15
CPNE3-204ENST00000517862 NMNAT3Q96T66 252 aa1.64□□□□□ -2.15
CPNE3-204ENST00000517862 PHB2Q99623 299 aa1.64□□□□□ -2.15
CPNE3-204ENST00000517862 MGLLQ99685 303 aa1.64□□□□□ -2.15
CPNE3-204ENST00000517862 RNASE7Q9H1E1 156 aaKnown RBP1.64□□□□□ -2.15
CPNE3-204ENST00000517862 DCSTAMPQ9H295 470 aa1.64□□□□□ -2.15
CPNE3-204ENST00000517862 POPDC3Q9HBV1 291 aa1.64□□□□□ -2.15
CPNE3-204ENST00000517862 GPR84Q9NQS5 396 aa1.64□□□□□ -2.15
CPNE3-204ENST00000517862 METTL1Q9UBP6 276 aaKnown RBP1.64□□□□□ -2.15
CPNE3-204ENST00000517862 SNX12Q9UMY4 172 aa1.64□□□□□ -2.15
CPNE3-204ENST00000517862 A8MUN3 132 aa1.63□□□□□ -2.15
CPNE3-204ENST00000517862 DISC1C4P0D8 188 aa1.63□□□□□ -2.15
CPNE3-204ENST00000517862 C15orf65H3BRN8 121 aa1.63□□□□□ -2.15
CPNE3-204ENST00000517862 H7C1C5 153 aa1.63□□□□□ -2.15
CPNE3-204ENST00000517862 LST1O00453 97 aa1.63□□□□□ -2.15
CPNE3-204ENST00000517862 UBE2L6O14933 153 aa1.63□□□□□ -2.15
CPNE3-204ENST00000517862 OR5G3P0C626 314 aa1.63□□□□□ -2.15
CPNE3-204ENST00000517862 IGHV3-30-3P0DP02 117 aa1.63□□□□□ -2.15
CPNE3-204ENST00000517862 HRES1P13985 223 aa1.63□□□□□ -2.15
CPNE3-204ENST00000517862 AKR1C2P52895 323 aa1.63□□□□□ -2.15
CPNE3-204ENST00000517862 DEFA3P59666 94 aa1.63□□□□□ -2.15
CPNE3-204ENST00000517862 RPS20P60866 119 aaKnown RBP1.63□□□□□ -2.15
CPNE3-204ENST00000517862 LCN6P62502 163 aa1.63□□□□□ -2.15
CPNE3-204ENST00000517862 CDK10Q15131 360 aa1.63□□□□□ -2.15
CPNE3-204ENST00000517862 GUK1Q16774 197 aa1.63□□□□□ -2.15
CPNE3-204ENST00000517862 KRTAP13-2Q52LG2 175 aa1.63□□□□□ -2.15
CPNE3-204ENST00000517862 PCOTHQ58A44 107 aa1.63□□□□□ -2.15
CPNE3-204ENST00000517862 TNFAIP8L3Q5GJ75 292 aa1.63□□□□□ -2.15
CPNE3-204ENST00000517862 Q6Q795 121 aa1.63□□□□□ -2.15
CPNE3-204ENST00000517862 AMTNQ6UX39 209 aa1.63□□□□□ -2.15
CPNE3-204ENST00000517862 C3orf22Q8N5N4 141 aa1.63□□□□□ -2.15
CPNE3-204ENST00000517862 OR10A6Q8NH74 314 aa1.63□□□□□ -2.15
CPNE3-204ENST00000517862 SPACA4Q8TDM5 124 aa1.63□□□□□ -2.15
CPNE3-204ENST00000517862 DIRC1Q969H9 104 aa1.63□□□□□ -2.15
CPNE3-204ENST00000517862 SPTSSAQ969W0 71 aa1.63□□□□□ -2.15
CPNE3-204ENST00000517862 IGF2BP2-AS1Q96M15 143 aa1.63□□□□□ -2.15
CPNE3-204ENST00000517862 CNBD2Q96M20 576 aa1.63□□□□□ -2.15
CPNE3-204ENST00000517862 RHPN1-AS1Q9BWJ2 59 aa1.63□□□□□ -2.15
CPNE3-204ENST00000517862 C11orf1Q9H5F2 150 aa1.63□□□□□ -2.15
CPNE3-204ENST00000517862 RERGLQ9H628 205 aa1.63□□□□□ -2.15
CPNE3-204ENST00000517862 RABAC1Q9UI14 185 aa1.63□□□□□ -2.15
CPNE3-204ENST00000517862 PRO0461Q9UI25 63 aa1.63□□□□□ -2.15
CPNE3-204ENST00000517862 LHFPL6Q9Y693 200 aa1.63□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms