RNA–Protein interactions for RNA: ENST00000516956.1

SCARNA16.4-201, small Cajal body-specific RNA 16, humanhuman

BASIC

Gene SCARNA16, Length 187 nt, Biotype scaRNA, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA16.4-201ENST00000516956 Q6ZQT7 251 aa3.91□□□□□ -1.78
SCARNA16.4-201ENST00000516956 FAM231DQ6ZW35 169 aa3.91□□□□□ -1.78
SCARNA16.4-201ENST00000516956 MUC7Q8TAX7 377 aa3.91□□□□□ -1.78
SCARNA16.4-201ENST00000516956 SFRP2Q96HF1 295 aa3.91□□□□□ -1.78
SCARNA16.4-201ENST00000516956 IL36BQ9NZH7 164 aa3.91□□□□□ -1.78
SCARNA16.4-201ENST00000516956 IGKV3D-20A0A0C4DH25 116 aa3.9□□□□□ -1.79
SCARNA16.4-201ENST00000516956 C19orf71A6NCJ1 209 aa3.9□□□□□ -1.79
SCARNA16.4-201ENST00000516956 A8MWV9 139 aa3.9□□□□□ -1.79
SCARNA16.4-201ENST00000516956 F5H697 171 aa3.9□□□□□ -1.79
SCARNA16.4-201ENST00000516956 C3orf84H3BNL1 204 aa3.9□□□□□ -1.79
SCARNA16.4-201ENST00000516956 K7EN84 100 aa3.9□□□□□ -1.79
SCARNA16.4-201ENST00000516956 RHODO00212 210 aa3.9□□□□□ -1.79
SCARNA16.4-201ENST00000516956 IGLV2-8P01709 118 aa3.9□□□□□ -1.79
SCARNA16.4-201ENST00000516956 IGHV3-53P01767 116 aa3.9□□□□□ -1.79
SCARNA16.4-201ENST00000516956 TRGC1P0CF51 173 aa3.9□□□□□ -1.79
SCARNA16.4-201ENST00000516956 MED14OSP0DP75 135 aa3.9□□□□□ -1.79
SCARNA16.4-201ENST00000516956 GZMBP10144 247 aa3.9□□□□□ -1.79
SCARNA16.4-201ENST00000516956 S100PP25815 95 aa3.9□□□□□ -1.79
SCARNA16.4-201ENST00000516956 RIGQ13278 110 aa3.9□□□□□ -1.79
SCARNA16.4-201ENST00000516956 TWIST1Q15672 202 aa3.9□□□□□ -1.79
SCARNA16.4-201ENST00000516956 C12orf74Q32Q52 190 aa3.9□□□□□ -1.79
SCARNA16.4-201ENST00000516956 CT83Q5H943 113 aa3.9□□□□□ -1.79
SCARNA16.4-201ENST00000516956 DNLZQ5SXM8 178 aa3.9□□□□□ -1.79
SCARNA16.4-201ENST00000516956 ZFAND6Q6FIF0 208 aa3.9□□□□□ -1.79
SCARNA16.4-201ENST00000516956 KCNIP4Q6PIL6 250 aa3.9□□□□□ -1.79
SCARNA16.4-201ENST00000516956 Q6ZTI0 123 aa3.9□□□□□ -1.79
SCARNA16.4-201ENST00000516956 SREK1IP1Q8N9Q2 155 aaPredicted RBP3.9□□□□□ -1.79
SCARNA16.4-201ENST00000516956 C11orf72Q8NBR9 251 aa3.9□□□□□ -1.79
SCARNA16.4-201ENST00000516956 PHLDA1Q8WV24 401 aaPredicted RBP3.9□□□□□ -1.79
SCARNA16.4-201ENST00000516956 ISOC2Q96AB3 205 aa3.9□□□□□ -1.79
SCARNA16.4-201ENST00000516956 ANAPC16Q96DE5 110 aa3.9□□□□□ -1.79
SCARNA16.4-201ENST00000516956 NDUFAF3Q9BU61 184 aa3.9□□□□□ -1.79
SCARNA16.4-201ENST00000516956 SEC11CQ9BY50 192 aa3.9□□□□□ -1.79
SCARNA16.4-201ENST00000516956 EDA2RQ9HAV5 297 aa3.9□□□□□ -1.79
SCARNA16.4-201ENST00000516956 C11orf21Q9P2W6 132 aa3.9□□□□□ -1.79
SCARNA16.4-201ENST00000516956 TRAV4A0A0B4J268 109 aa3.89□□□□□ -1.79
SCARNA16.4-201ENST00000516956 MUC21A0A0G2JKD1 596 aa3.89□□□□□ -1.79
SCARNA16.4-201ENST00000516956 MUC21A0A140T8X8 626 aa3.89□□□□□ -1.79
SCARNA16.4-201ENST00000516956 IGLL5B9A064 214 aa3.89□□□□□ -1.79
SCARNA16.4-201ENST00000516956 SNAPINO95295 136 aa3.89□□□□□ -1.79
SCARNA16.4-201ENST00000516956 APOC3P02656 99 aa3.89□□□□□ -1.79
SCARNA16.4-201ENST00000516956 S100A8P05109 93 aa3.89□□□□□ -1.79
SCARNA16.4-201ENST00000516956 OR5AL1P0C617 328 aa3.89□□□□□ -1.79
SCARNA16.4-201ENST00000516956 PIK3CD-AS1Q5SR53 167 aa3.89□□□□□ -1.79
SCARNA16.4-201ENST00000516956 FAM74A4Q5TZK3 123 aa3.89□□□□□ -1.79
SCARNA16.4-201ENST00000516956 CEMP1Q6PRD7 247 aaPredicted RBP3.89□□□□□ -1.79
SCARNA16.4-201ENST00000516956 LYZL1Q6UWQ5 148 aa3.89□□□□□ -1.79
SCARNA16.4-201ENST00000516956 Q6ZTC4 211 aa3.89□□□□□ -1.79
SCARNA16.4-201ENST00000516956 SVBPQ8N300 66 aa3.89□□□□□ -1.79
SCARNA16.4-201ENST00000516956 TSKUQ8WUA8 353 aa3.89□□□□□ -1.79
SCARNA16.4-201ENST00000516956 RASL10AQ92737 203 aa3.89□□□□□ -1.79
SCARNA16.4-201ENST00000516956 PTH2Q96A98 100 aa3.89□□□□□ -1.79
SCARNA16.4-201ENST00000516956 FAM210BQ96KR6 192 aa3.89□□□□□ -1.79
SCARNA16.4-201ENST00000516956 PGLYRP4Q96LB8 373 aa3.89□□□□□ -1.79
SCARNA16.4-201ENST00000516956 C9orf85Q96MD7 179 aa3.89□□□□□ -1.79
SCARNA16.4-201ENST00000516956 AP1S3Q96PC3 154 aa3.89□□□□□ -1.79
SCARNA16.4-201ENST00000516956 PRADC1Q9BSG0 188 aa3.89□□□□□ -1.79
SCARNA16.4-201ENST00000516956 CTDSP1Q9GZU7 261 aa3.89□□□□□ -1.79
SCARNA16.4-201ENST00000516956 GFRA4Q9GZZ7 299 aa3.89□□□□□ -1.79
SCARNA16.4-201ENST00000516956 NAT8BQ9UHF3 227 aa3.89□□□□□ -1.79
SCARNA16.4-201ENST00000516956 CELA1Q9UNI1 258 aa3.89□□□□□ -1.79
SCARNA16.4-201ENST00000516956 DNHD1Q96M86 4753 aa3.89□□□□□ -1.79
SCARNA16.4-201ENST00000516956 A0A1B0GUT8 65 aa3.88□□□□□ -1.79
SCARNA16.4-201ENST00000516956 PLAC8L1A1L4L8 177 aa3.88□□□□□ -1.79
SCARNA16.4-201ENST00000516956 FAM231BA6NCW3 169 aa3.88□□□□□ -1.79
SCARNA16.4-201ENST00000516956 H7C1H1 209 aa3.88□□□□□ -1.79
SCARNA16.4-201ENST00000516956 RS1O15537 224 aa3.88□□□□□ -1.79
SCARNA16.4-201ENST00000516956 PAX4O43316 350 aa3.88□□□□□ -1.79
SCARNA16.4-201ENST00000516956 NUDT3O95989 172 aa3.88□□□□□ -1.79
SCARNA16.4-201ENST00000516956 MGPP08493 103 aa3.88□□□□□ -1.79
SCARNA16.4-201ENST00000516956 RNASE3P12724 160 aaKnown RBP3.88□□□□□ -1.79
SCARNA16.4-201ENST00000516956 TCTAP57738 103 aa3.88□□□□□ -1.79
SCARNA16.4-201ENST00000516956 ZNF56Q15929 161 aa3.88□□□□□ -1.79
SCARNA16.4-201ENST00000516956 RNF212Q495C1 297 aa3.88□□□□□ -1.79
SCARNA16.4-201ENST00000516956 DMRTA1Q5VZB9 504 aa3.88□□□□□ -1.79
SCARNA16.4-201ENST00000516956 WDR73Q6P4I2 378 aa3.88□□□□□ -1.79
SCARNA16.4-201ENST00000516956 RPS10P5Q9NQ39 176 aa3.88□□□□□ -1.79
SCARNA16.4-201ENST00000516956 PRO0255Q9UI72 69 aa3.88□□□□□ -1.79
SCARNA16.4-201ENST00000516956 HHLA3Q9XRX5 114 aa3.88□□□□□ -1.79
SCARNA16.4-201ENST00000516956 A0A087WWL8 130 aa3.87□□□□□ -1.79
SCARNA16.4-201ENST00000516956 IGHV3-73A0A0B4J1V6 119 aa3.87□□□□□ -1.79
SCARNA16.4-201ENST00000516956 A0A0J9YY99 117 aa3.87□□□□□ -1.79
SCARNA16.4-201ENST00000516956 A0A1B0GW15 77 aa3.87□□□□□ -1.79
SCARNA16.4-201ENST00000516956 HIGD1CA8MV81 97 aa3.87□□□□□ -1.79
SCARNA16.4-201ENST00000516956 SNAI2O43623 268 aa3.87□□□□□ -1.79
SCARNA16.4-201ENST00000516956 NTF3P20783 257 aa3.87□□□□□ -1.79
SCARNA16.4-201ENST00000516956 RAB4BP61018 213 aa3.87□□□□□ -1.79
SCARNA16.4-201ENST00000516956 RHEBQ15382 184 aa3.87□□□□□ -1.79
SCARNA16.4-201ENST00000516956 CFAP126Q5VTH2 177 aa3.87□□□□□ -1.79
SCARNA16.4-201ENST00000516956 ZFP2Q6ZN57 461 aa3.87□□□□□ -1.79
SCARNA16.4-201ENST00000516956 SH2D6Q7Z4S9 175 aa3.87□□□□□ -1.79
SCARNA16.4-201ENST00000516956 UBE2DNLQ8IWF7 75 aa3.87□□□□□ -1.79
SCARNA16.4-201ENST00000516956 SLC7A5P1Q8MH63 180 aa3.87□□□□□ -1.79
SCARNA16.4-201ENST00000516956 C15orf53Q8NAA6 179 aa3.87□□□□□ -1.79
SCARNA16.4-201ENST00000516956 CLRN3Q8NCR9 226 aa3.87□□□□□ -1.79
SCARNA16.4-201ENST00000516956 OR10AG1Q8NH19 301 aa3.87□□□□□ -1.79
SCARNA16.4-201ENST00000516956 BTF3L4Q96K17 158 aa3.87□□□□□ -1.79
SCARNA16.4-201ENST00000516956 C18orf15Q96N68 181 aa3.87□□□□□ -1.79
SCARNA16.4-201ENST00000516956 SSBP4Q9BWG4 385 aaPredicted RBP3.87□□□□□ -1.79
SCARNA16.4-201ENST00000516956 DPH3P1Q9H4G8 78 aa3.87□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 152 ms