RNA–Protein interactions for RNA: ENST00000515753.1

HERC4-215, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 2

Gene HERC4, Length 589 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-215ENST00000515753 CHD3Q12873 2000 aaKnown RBP1.63□□□□□ -2.15
HERC4-215ENST00000515753 TRAV41A0A0B4J266 112 aa1.63□□□□□ -2.15
HERC4-215ENST00000515753 MDFIC2A0A1B0GVS7 189 aa1.63□□□□□ -2.15
HERC4-215ENST00000515753 DUXBA0A1W2PPF3 345 aa1.63□□□□□ -2.15
HERC4-215ENST00000515753 FUOMA2VDF0 154 aa1.63□□□□□ -2.15
HERC4-215ENST00000515753 RIIAD1A6NNX1 92 aa1.63□□□□□ -2.15
HERC4-215ENST00000515753 G3V3Q6 166 aa1.63□□□□□ -2.15
HERC4-215ENST00000515753 BUB1B-PAK6H3BSN5 160 aa1.63□□□□□ -2.15
HERC4-215ENST00000515753 H3BUX3 64 aa1.63□□□□□ -2.15
HERC4-215ENST00000515753 M0R135 149 aa1.63□□□□□ -2.15
HERC4-215ENST00000515753 RER1O15258 196 aa1.63□□□□□ -2.15
HERC4-215ENST00000515753 IFNGP01579 166 aa1.63□□□□□ -2.15
HERC4-215ENST00000515753 IGKV1-17P01599 117 aa1.63□□□□□ -2.15
HERC4-215ENST00000515753 RBP4P02753 201 aa1.63□□□□□ -2.15
HERC4-215ENST00000515753 S100GP29377 79 aa1.63□□□□□ -2.15
HERC4-215ENST00000515753 INSL3P51460 131 aa1.63□□□□□ -2.15
HERC4-215ENST00000515753 RRN3P1Q2M238 152 aa1.63□□□□□ -2.15
HERC4-215ENST00000515753 PYDC2Q56P42 97 aa1.63□□□□□ -2.15
HERC4-215ENST00000515753 MINOS1Q5TGZ0 78 aa1.63□□□□□ -2.15
HERC4-215ENST00000515753 LYZL1Q6UWQ5 148 aa1.63□□□□□ -2.15
HERC4-215ENST00000515753 ZNF767PQ75MW2 155 aa1.63□□□□□ -2.15
HERC4-215ENST00000515753 TCF24Q7RTU0 167 aa1.63□□□□□ -2.15
HERC4-215ENST00000515753 VMO1Q7Z5L0 202 aa1.63□□□□□ -2.15
HERC4-215ENST00000515753 KTN1-AS1Q86SY8 53 aa1.63□□□□□ -2.15
HERC4-215ENST00000515753 OR5AS1Q8N127 324 aa1.63□□□□□ -2.15
HERC4-215ENST00000515753 Q8N2B8 174 aa1.63□□□□□ -2.15
HERC4-215ENST00000515753 ADAT1Q9BUB4 502 aaKnown RBP1.63□□□□□ -2.15
HERC4-215ENST00000515753 RERGLQ9H628 205 aa1.63□□□□□ -2.15
HERC4-215ENST00000515753 ERGIC3Q9Y282 383 aa1.63□□□□□ -2.15
HERC4-215ENST00000515753 AMMECR1Q9Y4X0 333 aaPredicted RBP1.63□□□□□ -2.15
HERC4-215ENST00000515753 RBM7Q9Y580 266 aaKnown RBP1.63□□□□□ -2.15
HERC4-215ENST00000515753 TIMM9Q9Y5J7 89 aa1.63□□□□□ -2.15
HERC4-215ENST00000515753 MINOS1-NBL1R4GNA1 71 aa1.63□□□□□ -2.15
HERC4-215ENST00000515753 ANK3Q12955 4377 aaKnown RBP1.63□□□□□ -2.15
HERC4-215ENST00000515753 ZNF469Q96JG9 3925 aaPredicted RBP1.63□□□□□ -2.15
HERC4-215ENST00000515753 FBN1P35555 2871 aaKnown RBP1.62□□□□□ -2.15
HERC4-215ENST00000515753 USF3Q68DE3 2245 aa1.62□□□□□ -2.15
HERC4-215ENST00000515753 A0A0J9YX75 114 aa1.62□□□□□ -2.15
HERC4-215ENST00000515753 A0A1W2PNM2 257 aa1.62□□□□□ -2.15
HERC4-215ENST00000515753 A0A1W2PRE2 83 aa1.62□□□□□ -2.15
HERC4-215ENST00000515753 TCRBV4S1A1TA0A5B7 111 aa1.62□□□□□ -2.15
HERC4-215ENST00000515753 C11orf86A6NJI1 115 aa1.62□□□□□ -2.15
HERC4-215ENST00000515753 OOSP1A8MZH6 123 aa1.62□□□□□ -2.15
HERC4-215ENST00000515753 SLC22A1O15245 554 aa1.62□□□□□ -2.15
HERC4-215ENST00000515753 ZNF73O43830 326 aaPredicted RBP1.62□□□□□ -2.15
HERC4-215ENST00000515753 CYB5AP00167 134 aa1.62□□□□□ -2.15
HERC4-215ENST00000515753 GYPAP02724 150 aa1.62□□□□□ -2.15
HERC4-215ENST00000515753 SCGB1A1P11684 91 aa1.62□□□□□ -2.15
HERC4-215ENST00000515753 CDC42P60953 191 aa1.62□□□□□ -2.15
HERC4-215ENST00000515753 SMIM21Q3B7S5 101 aa1.62□□□□□ -2.15
HERC4-215ENST00000515753 TMEM128Q5BJH2 165 aa1.62□□□□□ -2.15
HERC4-215ENST00000515753 CRYBG3Q68DQ2 2970 aa1.62□□□□□ -2.15
HERC4-215ENST00000515753 MIR17HGQ75NE6 70 aa1.62□□□□□ -2.15
HERC4-215ENST00000515753 MSRB3Q8IXL7 192 aa1.62□□□□□ -2.15
HERC4-215ENST00000515753 RPP25LQ8N5L8 163 aaKnown RBP1.62□□□□□ -2.15
HERC4-215ENST00000515753 OR5A2Q8NGI9 324 aa1.62□□□□□ -2.15
HERC4-215ENST00000515753 OR4C16Q8NGL9 310 aa1.62□□□□□ -2.15
HERC4-215ENST00000515753 OR5C1Q8NGR4 320 aa1.62□□□□□ -2.15
HERC4-215ENST00000515753 TERB2Q8NHR7 220 aa1.62□□□□□ -2.15
HERC4-215ENST00000515753 PFN4Q8NHR9 129 aa1.62□□□□□ -2.15
HERC4-215ENST00000515753 DNAJC30Q96LL9 226 aa1.62□□□□□ -2.15
HERC4-215ENST00000515753 Q96M85 177 aa1.62□□□□□ -2.15
HERC4-215ENST00000515753 SCGB3A1Q96QR1 104 aa1.62□□□□□ -2.15
HERC4-215ENST00000515753 IMMP2LQ96T52 175 aa1.62□□□□□ -2.15
HERC4-215ENST00000515753 IER3IP1Q9Y5U9 82 aa1.62□□□□□ -2.15
HERC4-215ENST00000515753 ACANP16112 2415 aa1.62□□□□□ -2.15
HERC4-215ENST00000515753 SCN3AQ9NY46 2000 aa1.62□□□□□ -2.15
HERC4-215ENST00000515753 HMCN1Q96RW7 5635 aa1.61□□□□□ -2.15
HERC4-215ENST00000515753 CCDC88CQ9P219 2028 aa1.61□□□□□ -2.15
HERC4-215ENST00000515753 TRAV7A0A075B6U4 112 aa1.61□□□□□ -2.15
HERC4-215ENST00000515753 TRAV27A0A087WT01 109 aa1.61□□□□□ -2.15
HERC4-215ENST00000515753 H3BT86 120 aa1.61□□□□□ -2.15
HERC4-215ENST00000515753 CYB5BO43169 146 aa1.61□□□□□ -2.15
HERC4-215ENST00000515753 GADD45GO95257 159 aa1.61□□□□□ -2.15
HERC4-215ENST00000515753 IGLV6-57P01721 117 aa1.61□□□□□ -2.15
HERC4-215ENST00000515753 C1QCP02747 245 aa1.61□□□□□ -2.15
HERC4-215ENST00000515753 HMGN1P05114 100 aa1.61□□□□□ -2.15
HERC4-215ENST00000515753 CSN2P05814 226 aa1.61□□□□□ -2.15
HERC4-215ENST00000515753 SRIP30626 198 aa1.61□□□□□ -2.15
HERC4-215ENST00000515753 RPL28P46779 137 aaKnown RBP1.61□□□□□ -2.15
HERC4-215ENST00000515753 FXYD2P54710 66 aa1.61□□□□□ -2.15
HERC4-215ENST00000515753 DEFA3P59666 94 aa1.61□□□□□ -2.15
HERC4-215ENST00000515753 S100A12P80511 92 aa1.61□□□□□ -2.15
HERC4-215ENST00000515753 LINC01554Q52M75 96 aa1.61□□□□□ -2.15
HERC4-215ENST00000515753 SPRNQ5BIV9 151 aa1.61□□□□□ -2.15
HERC4-215ENST00000515753 PDZD9Q8IXQ8 264 aa1.61□□□□□ -2.15
HERC4-215ENST00000515753 Q8IYB0 196 aa1.61□□□□□ -2.15
HERC4-215ENST00000515753 HIST3H2BBQ8N257 126 aa1.61□□□□□ -2.15
HERC4-215ENST00000515753 EXOC3-AS1Q8N2X6 119 aa1.61□□□□□ -2.15
HERC4-215ENST00000515753 C10orf111Q8N326 155 aa1.61□□□□□ -2.15
HERC4-215ENST00000515753 FAM216BQ8N7L0 139 aa1.61□□□□□ -2.15
HERC4-215ENST00000515753 OR4D11Q8NGI4 311 aa1.61□□□□□ -2.15
HERC4-215ENST00000515753 CANT1Q8WVQ1 401 aa1.61□□□□□ -2.15
HERC4-215ENST00000515753 SLAMF6Q96DU3 332 aa1.61□□□□□ -2.15
HERC4-215ENST00000515753 ZNF714Q96N38 554 aa1.61□□□□□ -2.15
HERC4-215ENST00000515753 WFDC6Q9BQY6 131 aa1.61□□□□□ -2.15
HERC4-215ENST00000515753 CCDC32Q9BV29 185 aa1.61□□□□□ -2.15
HERC4-215ENST00000515753 TMEM133Q9H2Q1 129 aa1.61□□□□□ -2.15
HERC4-215ENST00000515753 SPANXCQ9NY87 97 aa1.61□□□□□ -2.15
HERC4-215ENST00000515753 NAT8Q9UHE5 227 aa1.61□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms