RNA–Protein interactions for RNA: ENST00000515594.5

PHF3-212, Transcript of PHD finger protein 3, humanhuman

TSL 2

Gene PHF3, Length 3,074 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF3-212ENST00000515594 NPFFO15130 113 aa9.76□□□□□ -0.85
PHF3-212ENST00000515594 AZU1P20160 251 aa9.76□□□□□ -0.85
PHF3-212ENST00000515594 RPL39P62891 51 aaKnown RBP9.76□□□□□ -0.85
PHF3-212ENST00000515594 FOXI2Q6ZQN5 318 aa9.76□□□□□ -0.85
PHF3-212ENST00000515594 OR11H1Q8NG94 326 aa9.76□□□□□ -0.85
PHF3-212ENST00000515594 OR11H2Q8NH07 326 aa9.76□□□□□ -0.85
PHF3-212ENST00000515594 PRADC1Q9BSG0 188 aa9.76□□□□□ -0.85
PHF3-212ENST00000515594 TRBV7-3A0A075B6L6 115 aa9.76□□□□□ -0.85
PHF3-212ENST00000515594 IGKV3-20P01619 116 aa9.76□□□□□ -0.85
PHF3-212ENST00000515594 LGALS1P09382 135 aaKnown RBP9.76□□□□□ -0.85
PHF3-212ENST00000515594 LMO4P61968 165 aa9.76□□□□□ -0.85
PHF3-212ENST00000515594 BAALCQ8WXS3 180 aa9.76□□□□□ -0.85
PHF3-212ENST00000515594 SPANXB1Q9NS25 103 aaPredicted RBP9.76□□□□□ -0.85
PHF3-212ENST00000515594 TRAV41A0A0B4J266 112 aa9.75□□□□□ -0.85
PHF3-212ENST00000515594 TMEM190Q8WZ59 177 aa9.75□□□□□ -0.85
PHF3-212ENST00000515594 USP9XQ93008 2570 aaPredicted RBP9.75□□□□□ -0.85
PHF3-212ENST00000515594 OOSP1A8MZH6 123 aa9.75□□□□□ -0.85
PHF3-212ENST00000515594 H7C1H1 209 aa9.75□□□□□ -0.85
PHF3-212ENST00000515594 SLC25A16P16260 332 aa9.75□□□□□ -0.85
PHF3-212ENST00000515594 SPAG8Q99932 426 aaPredicted RBP9.75□□□□□ -0.85
PHF3-212ENST00000515594 SMPXQ9UHP9 88 aa9.75□□□□□ -0.85
PHF3-212ENST00000515594 MYMXA0A1B0GTQ4 84 aa9.74□□□□□ -0.85
PHF3-212ENST00000515594 SCGB2A2Q13296 93 aa9.74□□□□□ -0.85
PHF3-212ENST00000515594 LY6DQ14210 128 aa9.74□□□□□ -0.85
PHF3-212ENST00000515594 C1orf122Q6ZSJ8 110 aa9.74□□□□□ -0.85
PHF3-212ENST00000515594 NEXN-AS1Q8NBZ9 246 aa9.74□□□□□ -0.85
PHF3-212ENST00000515594 ITLN2Q8WWU7 325 aaPredicted RBP9.74□□□□□ -0.85
PHF3-212ENST00000515594 PGPEP1Q9NXJ5 209 aa9.74□□□□□ -0.85
PHF3-212ENST00000515594 U3KQE9 123 aa9.74□□□□□ -0.85
PHF3-212ENST00000515594 FBN2P35556 2912 aa9.74□□□□□ -0.85
PHF3-212ENST00000515594 ZNF815PA8K554 130 aa9.74□□□□□ -0.85
PHF3-212ENST00000515594 TMEM95Q3KNT9 176 aa9.74□□□□□ -0.85
PHF3-212ENST00000515594 MORN3Q6PF18 240 aaPredicted RBP9.74□□□□□ -0.85
PHF3-212ENST00000515594 NACAE9PAV3 2078 aa9.74□□□□□ -0.85
PHF3-212ENST00000515594 APOMO95445 188 aa9.74□□□□□ -0.85
PHF3-212ENST00000515594 RNASE3P12724 160 aaKnown RBP9.74□□□□□ -0.85
PHF3-212ENST00000515594 PLNP26678 52 aa9.74□□□□□ -0.85
PHF3-212ENST00000515594 RAB9AP51151 201 aa9.74□□□□□ -0.85
PHF3-212ENST00000515594 BLCAPP62952 87 aa9.74□□□□□ -0.85
PHF3-212ENST00000515594 SCGB1D4Q6XE38 83 aa9.74□□□□□ -0.85
PHF3-212ENST00000515594 MYO18BQ8IUG5 2567 aa9.74□□□□□ -0.85
PHF3-212ENST00000515594 TRBV7-1A0A0A6YYK4 115 aa9.73□□□□□ -0.85
PHF3-212ENST00000515594 C19orf84I3L1E1 186 aa9.73□□□□□ -0.85
PHF3-212ENST00000515594 SAMD13Q5VXD3 122 aa9.73□□□□□ -0.85
PHF3-212ENST00000515594 PTH2Q96A98 100 aa9.73□□□□□ -0.85
PHF3-212ENST00000515594 MYO9AB2RTY4 2548 aa9.73□□□□□ -0.85
PHF3-212ENST00000515594 TLN2Q9Y4G6 2542 aa9.73□□□□□ -0.85
PHF3-212ENST00000515594 RRN3P1Q2M238 152 aa9.73□□□□□ -0.85
PHF3-212ENST00000515594 FAM74A4Q5TZK3 123 aa9.73□□□□□ -0.85
PHF3-212ENST00000515594 ZFP2Q6ZN57 461 aa9.73□□□□□ -0.85
PHF3-212ENST00000515594 LINC01549A6NIU2 74 aa9.72□□□□□ -0.85
PHF3-212ENST00000515594 IGHV4-38-2P0DP08 117 aa9.72□□□□□ -0.85
PHF3-212ENST00000515594 ASIPP42127 132 aa9.72□□□□□ -0.85
PHF3-212ENST00000515594 OR10J6PQ8NGY7 276 aa9.72□□□□□ -0.85
PHF3-212ENST00000515594 TOMM6Q96B49 74 aa9.72□□□□□ -0.85
PHF3-212ENST00000515594 OPRPNQ99935 248 aaPredicted RBP9.72□□□□□ -0.85
PHF3-212ENST00000515594 NIPBLQ6KC79 2804 aaeCLIP9.72□□□□□ -0.856e-6■■□□□ 12.8
PHF3-212ENST00000515594 LOC107984156A0A0G2JMH3 177 aa9.72□□□□□ -0.85
PHF3-212ENST00000515594 PF4V1P10720 104 aa9.72□□□□□ -0.85
PHF3-212ENST00000515594 ARL17AQ8IVW1 177 aa9.72□□□□□ -0.85
PHF3-212ENST00000515594 DPH3P1Q9H4G8 78 aa9.72□□□□□ -0.85
PHF3-212ENST00000515594 SETD2Q9BYW2 2564 aaPredicted RBP9.72□□□□□ -0.85
PHF3-212ENST00000515594 IGHV4-4A0A075B6R2 117 aa9.71□□□□□ -0.85
PHF3-212ENST00000515594 C11orf86A6NJI1 115 aa9.71□□□□□ -0.85
PHF3-212ENST00000515594 TSHBP01222 138 aa9.71□□□□□ -0.85
PHF3-212ENST00000515594 CRYGDP07320 174 aa9.71□□□□□ -0.85
PHF3-212ENST00000515594 ZNF418Q8TF45 676 aaPredicted RBP9.71□□□□□ -0.85
PHF3-212ENST00000515594 MRAP2Q96G30 205 aa9.71□□□□□ -0.85
PHF3-212ENST00000515594 C20orf78Q9BR46 151 aa9.71□□□□□ -0.85
PHF3-212ENST00000515594 MRPL16Q9NX20 251 aaKnown RBP9.71□□□□□ -0.85
PHF3-212ENST00000515594 TP53TG1Q9Y2A0 90 aa9.71□□□□□ -0.85
PHF3-212ENST00000515594 AKAP9Q99996 3911 aa9.71□□□□□ -0.86
PHF3-212ENST00000515594 IGHV3-64A0A075B6Q5 118 aa9.71□□□□□ -0.86
PHF3-212ENST00000515594 TRAV12-2A0A075B6T6 113 aa9.71□□□□□ -0.86
PHF3-212ENST00000515594 TRAV21A0A0B4J279 112 aa9.71□□□□□ -0.86
PHF3-212ENST00000515594 A0A1B0GWB2 263 aa9.71□□□□□ -0.86
PHF3-212ENST00000515594 F5H697 171 aa9.71□□□□□ -0.86
PHF3-212ENST00000515594 NBL1P41271 181 aa9.71□□□□□ -0.86
PHF3-212ENST00000515594 TSPEAR-AS2P59090 65 aa9.71□□□□□ -0.86
PHF3-212ENST00000515594 SRSF9Q13242 221 aaKnown RBP eCLIP9.71□□□□□ -0.86
PHF3-212ENST00000515594 C9orf139Q6ZV77 190 aa9.71□□□□□ -0.86
PHF3-212ENST00000515594 PKD1L2Q7Z442 2459 aa9.71□□□□□ -0.86
PHF3-212ENST00000515594 GAGE12HA6NDE8 117 aa9.7□□□□□ -0.86
PHF3-212ENST00000515594 SOCS3O14543 225 aa9.7□□□□□ -0.86
PHF3-212ENST00000515594 GAGE13Q4V321 117 aa9.7□□□□□ -0.86
PHF3-212ENST00000515594 C10orf99Q6UWK7 81 aa9.7□□□□□ -0.86
PHF3-212ENST00000515594 PRO0461Q9UI25 63 aa9.7□□□□□ -0.86
PHF3-212ENST00000515594 CACNA1AO00555 2505 aa9.7□□□□□ -0.86
PHF3-212ENST00000515594 TRAV12-3A0A0B4J271 114 aa9.7□□□□□ -0.86
PHF3-212ENST00000515594 PRSS47A8MTI9 375 aa9.7□□□□□ -0.86
PHF3-212ENST00000515594 ORMDL2Q53FV1 153 aa9.69□□□□□ -0.86
PHF3-212ENST00000515594 RHPN1-AS1Q9BWJ2 59 aa9.69□□□□□ -0.86
PHF3-212ENST00000515594 ZNF256Q9Y2P7 627 aaPredicted RBP9.69□□□□□ -0.86
PHF3-212ENST00000515594 C2CD3Q4AC94 2353 aa9.69□□□□□ -0.86
PHF3-212ENST00000515594 SMCPP49901 116 aaPredicted RBP9.69□□□□□ -0.86
PHF3-212ENST00000515594 MOB4Q9Y3A3 225 aa9.69□□□□□ -0.86
PHF3-212ENST00000515594 ZFYVE26Q68DK2 2539 aa9.69□□□□□ -0.86
PHF3-212ENST00000515594 H3BUX3 64 aa9.69□□□□□ -0.86
PHF3-212ENST00000515594 HOXA3O43365 443 aaPredicted RBP9.69□□□□□ -0.86
PHF3-212ENST00000515594 KLRB1Q12918 225 aa9.69□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms