RNA–Protein interactions for RNA: ENST00000515261.1

PDLIM3-211, Transcript of PDZ and LIM domain 3, humanhuman

TSL 2

Gene PDLIM3, Length 622 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-211ENST00000515261 URGCP-MRPS24S4R325 110 aa10.24□□□□□ -0.77
PDLIM3-211ENST00000515261 FAM240BA0A1B0GVZ2 78 aa10.23□□□□□ -0.77
PDLIM3-211ENST00000515261 SIX6O95475 246 aa10.23□□□□□ -0.77
PDLIM3-211ENST00000515261 IGLV2-8P01709 118 aa10.23□□□□□ -0.77
PDLIM3-211ENST00000515261 PQLC2Q6ZP29 291 aa10.23□□□□□ -0.77
PDLIM3-211ENST00000515261 TMEM75Q8N9X5 138 aa10.23□□□□□ -0.77
PDLIM3-211ENST00000515261 PTH2Q96A98 100 aa10.23□□□□□ -0.77
PDLIM3-211ENST00000515261 C11orf21Q9P2W6 132 aa10.23□□□□□ -0.77
PDLIM3-211ENST00000515261 A0A1W2PPV4 95 aa10.22□□□□□ -0.77
PDLIM3-211ENST00000515261 H0YIZ8 118 aa10.22□□□□□ -0.77
PDLIM3-211ENST00000515261 GCGP01275 180 aa10.22□□□□□ -0.77
PDLIM3-211ENST00000515261 SEC11BP0C7V7 166 aa10.22□□□□□ -0.77
PDLIM3-211ENST00000515261 ZNF80P51504 273 aaPredicted RBP10.22□□□□□ -0.77
PDLIM3-211ENST00000515261 CYB561D1Q8N8Q1 229 aa10.22□□□□□ -0.77
PDLIM3-211ENST00000515261 SERTM2A0A1B0GWG4 89 aa10.21□□□□□ -0.77
PDLIM3-211ENST00000515261 A8MWV9 139 aa10.21□□□□□ -0.77
PDLIM3-211ENST00000515261 LINC00694P0DN24 101 aa10.21□□□□□ -0.77
PDLIM3-211ENST00000515261 RNASE3P12724 160 aaKnown RBP10.21□□□□□ -0.77
PDLIM3-211ENST00000515261 ZFP2Q6ZN57 461 aa10.21□□□□□ -0.77
PDLIM3-211ENST00000515261 OR2T35Q8NGX2 323 aa10.21□□□□□ -0.77
PDLIM3-211ENST00000515261 PARLQ9H300 379 aa10.21□□□□□ -0.77
PDLIM3-211ENST00000515261 KLK12Q9UKR0 248 aa10.21□□□□□ -0.77
PDLIM3-211ENST00000515261 FGF8P55075 233 aaPredicted RBP10.2□□□□□ -0.78
PDLIM3-211ENST00000515261 CYCSP99999 105 aaKnown RBP10.2□□□□□ -0.78
PDLIM3-211ENST00000515261 LGALSLQ3ZCW2 172 aaPredicted RBP10.2□□□□□ -0.78
PDLIM3-211ENST00000515261 ZFP69Q49AA0 526 aa10.2□□□□□ -0.78
PDLIM3-211ENST00000515261 DNAJC30Q96LL9 226 aa10.2□□□□□ -0.78
PDLIM3-211ENST00000515261 SMIM3Q9BZL3 60 aa10.2□□□□□ -0.78
PDLIM3-211ENST00000515261 PKHD1L1Q86WI1 4243 aa10.19□□□□□ -0.78
PDLIM3-211ENST00000515261 K7EQM0 130 aa10.19□□□□□ -0.78
PDLIM3-211ENST00000515261 HMGB3O15347 200 aaKnown RBP10.19□□□□□ -0.78
PDLIM3-211ENST00000515261 RPL37AP61513 92 aaKnown RBP10.19□□□□□ -0.78
PDLIM3-211ENST00000515261 SMUG1Q53HV7 270 aa10.19□□□□□ -0.78
PDLIM3-211ENST00000515261 NIT1Q86X76 327 aa10.19□□□□□ -0.78
PDLIM3-211ENST00000515261 UBE2WQ96B02 151 aa10.19□□□□□ -0.78
PDLIM3-211ENST00000515261 SAMD10Q9BYL1 202 aa10.19□□□□□ -0.78
PDLIM3-211ENST00000515261 Q9UF83 564 aa10.19□□□□□ -0.78
PDLIM3-211ENST00000515261 PSG8Q9UQ74 426 aa10.19□□□□□ -0.78
PDLIM3-211ENST00000515261 HSPB11Q9Y547 144 aa10.19□□□□□ -0.78
PDLIM3-211ENST00000515261 IGLV2-11P01706 119 aa10.18□□□□□ -0.78
PDLIM3-211ENST00000515261 TCRAP04437 139 aa10.18□□□□□ -0.78
PDLIM3-211ENST00000515261 S100A4P26447 101 aaKnown RBP10.18□□□□□ -0.78
PDLIM3-211ENST00000515261 MZT2BQ6NZ67 158 aa10.18□□□□□ -0.78
PDLIM3-211ENST00000515261 C5orf17Q8NAS9 161 aa10.18□□□□□ -0.78
PDLIM3-211ENST00000515261 LINC00479Q96M42 142 aa10.18□□□□□ -0.78
PDLIM3-211ENST00000515261 CCDC32Q9BV29 185 aa10.18□□□□□ -0.78
PDLIM3-211ENST00000515261 A0A087WX48 190 aa10.17□□□□□ -0.78
PDLIM3-211ENST00000515261 ELOBQ15370 118 aa10.17□□□□□ -0.78
PDLIM3-211ENST00000515261 C14orf177Q52M58 125 aa10.17□□□□□ -0.78
PDLIM3-211ENST00000515261 PIK3CD-AS1Q5SR53 167 aa10.17□□□□□ -0.78
PDLIM3-211ENST00000515261 KCNIP4Q6PIL6 250 aa10.17□□□□□ -0.78
PDLIM3-211ENST00000515261 PRNTQ86SH4 94 aa10.17□□□□□ -0.78
PDLIM3-211ENST00000515261 C14orf178Q8N769 122 aaPredicted RBP10.17□□□□□ -0.78
PDLIM3-211ENST00000515261 PPP1R1CQ8WVI7 109 aa10.17□□□□□ -0.78
PDLIM3-211ENST00000515261 ARL14EPLP0DKL9 152 aa10.16□□□□□ -0.78
PDLIM3-211ENST00000515261 RAB2AP61019 212 aa10.16□□□□□ -0.78
PDLIM3-211ENST00000515261 FLI1Q01543 452 aaPredicted RBP10.16□□□□□ -0.78
PDLIM3-211ENST00000515261 OR10G9Q8NGN4 311 aa10.16□□□□□ -0.78
PDLIM3-211ENST00000515261 OR10G7Q8NGN6 311 aa10.16□□□□□ -0.78
PDLIM3-211ENST00000515261 PET100P0DJ07 73 aa10.15□□□□□ -0.78
PDLIM3-211ENST00000515261 RPL12P30050 165 aaKnown RBP10.15□□□□□ -0.78
PDLIM3-211ENST00000515261 Q0VG73 95 aa10.15□□□□□ -0.78
PDLIM3-211ENST00000515261 CHCHD7Q9BUK0 85 aa10.15□□□□□ -0.78
PDLIM3-211ENST00000515261 JPT2Q9H910 190 aa10.15□□□□□ -0.78
PDLIM3-211ENST00000515261 IGKV3D-20A0A0C4DH25 116 aa10.14□□□□□ -0.79
PDLIM3-211ENST00000515261 ASIPP42127 132 aa10.14□□□□□ -0.79
PDLIM3-211ENST00000515261 HNRNPA3P51991 378 aaKnown RBP10.14□□□□□ -0.79
PDLIM3-211ENST00000515261 SAPCD1Q5SSQ6 148 aa10.14□□□□□ -0.79
PDLIM3-211ENST00000515261 DMRTA1Q5VZB9 504 aa10.14□□□□□ -0.79
PDLIM3-211ENST00000515261 UFSP1Q6NVU6 142 aa10.14□□□□□ -0.79
PDLIM3-211ENST00000515261 ATRAIDQ6UW56 229 aa10.14□□□□□ -0.79
PDLIM3-211ENST00000515261 OR2G3Q8NGZ4 309 aa10.14□□□□□ -0.79
PDLIM3-211ENST00000515261 DAZAP1Q96EP5 407 aaKnown RBP10.14□□□□□ -0.79
PDLIM3-211ENST00000515261 C1orf43Q9BWL3 253 aa10.14□□□□□ -0.79
PDLIM3-211ENST00000515261 RHODO00212 210 aa10.13□□□□□ -0.79
PDLIM3-211ENST00000515261 MPC2O95563 127 aa10.13□□□□□ -0.79
PDLIM3-211ENST00000515261 CDC34P49427 236 aaPredicted RBP10.13□□□□□ -0.79
PDLIM3-211ENST00000515261 H2BFSP57053 126 aa10.13□□□□□ -0.79
PDLIM3-211ENST00000515261 SUMO1P63165 101 aaKnown RBP10.13□□□□□ -0.79
PDLIM3-211ENST00000515261 FAM74A4Q5TZK3 123 aa10.13□□□□□ -0.79
PDLIM3-211ENST00000515261 ENKURQ8TC29 256 aa10.13□□□□□ -0.79
PDLIM3-211ENST00000515261 EPDR1Q9UM22 224 aa10.13□□□□□ -0.79
PDLIM3-211ENST00000515261 STAG3L2P0CL84 134 aa10.12□□□□□ -0.79
PDLIM3-211ENST00000515261 STAG3L3P0CL85 134 aa10.12□□□□□ -0.79
PDLIM3-211ENST00000515261 WFDC1Q9HC57 220 aa10.12□□□□□ -0.79
PDLIM3-211ENST00000515261 IL36BQ9NZH7 164 aa10.12□□□□□ -0.79
PDLIM3-211ENST00000515261 FABP5P3A8MUU1 101 aa10.11□□□□□ -0.79
PDLIM3-211ENST00000515261 TMEM262E9PQX1 116 aa10.11□□□□□ -0.79
PDLIM3-211ENST00000515261 H3BVH4 76 aa10.11□□□□□ -0.79
PDLIM3-211ENST00000515261 CRPP02741 224 aa10.11□□□□□ -0.79
PDLIM3-211ENST00000515261 GCHFRP30047 84 aa10.11□□□□□ -0.79
PDLIM3-211ENST00000515261 SUN5Q8TC36 379 aa10.1□□□□□ -0.79
PDLIM3-211ENST00000515261 A0A087WWL8 130 aa10.09□□□□□ -0.79
PDLIM3-211ENST00000515261 B4DEV8 164 aa10.09□□□□□ -0.79
PDLIM3-211ENST00000515261 RPL36AP83881 106 aaKnown RBP10.09□□□□□ -0.79
PDLIM3-211ENST00000515261 OR11H4Q8NGC9 324 aa10.09□□□□□ -0.79
PDLIM3-211ENST00000515261 RPL36ALQ969Q0 106 aaKnown RBP10.09□□□□□ -0.79
PDLIM3-211ENST00000515261 RAB24Q969Q5 203 aa10.09□□□□□ -0.79
PDLIM3-211ENST00000515261 TMEM167BQ9NRX6 74 aa10.09□□□□□ -0.79
PDLIM3-211ENST00000515261 TRAV34A0A0B4J273 112 aa10.08□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms