RNA–Protein interactions for RNA: ENST00000514949.1

SNX2-213, Transcript of sorting nexin 2, humanhuman

TSL 2 BASIC

Gene SNX2, Length 2,119 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX2-213ENST00000514949 KIF25-AS1Q9Y6Z4 181 aa13.16□□□□□ -0.3
SNX2-213ENST00000514949 TMEM89A2RUT3 159 aa13.15□□□□□ -0.3
SNX2-213ENST00000514949 GNRH2O43555 120 aa13.15□□□□□ -0.3
SNX2-213ENST00000514949 AVPP01185 164 aa13.15□□□□□ -0.3
SNX2-213ENST00000514949 PSMB8P28062 276 aa13.15□□□□□ -0.3
SNX2-213ENST00000514949 ID1P41134 155 aa13.15□□□□□ -0.3
SNX2-213ENST00000514949 DSCR9P59020 149 aa13.15□□□□□ -0.3
SNX2-213ENST00000514949 NEXN-AS1Q8NBZ9 246 aa13.15□□□□□ -0.3
SNX2-213ENST00000514949 A0A1W2PPM0 123 aa13.15□□□□□ -0.3
SNX2-213ENST00000514949 SMIM13P0DJ93 91 aa13.15□□□□□ -0.3
SNX2-213ENST00000514949 LINC00315P59091 139 aa13.15□□□□□ -0.3
SNX2-213ENST00000514949 LCNL1Q6ZST4 164 aa13.15□□□□□ -0.3
SNX2-213ENST00000514949 RPL39LQ96EH5 51 aaKnown RBP13.15□□□□□ -0.3
SNX2-213ENST00000514949 COL12A1Q99715 3063 aa13.14□□□□□ -0.31
SNX2-213ENST00000514949 DOPEY1Q5JWR5 2465 aa13.14□□□□□ -0.31
SNX2-213ENST00000514949 FXYD2P54710 66 aa13.14□□□□□ -0.31
SNX2-213ENST00000514949 ODF3Q96PU9 254 aa13.14□□□□□ -0.31
SNX2-213ENST00000514949 SCGB3A1Q96QR1 104 aa13.14□□□□□ -0.31
SNX2-213ENST00000514949 CFAP46Q8IYW2 2715 aa13.14□□□□□ -0.31
SNX2-213ENST00000514949 LINC01619G3V211 115 aa13.13□□□□□ -0.31
SNX2-213ENST00000514949 CEND1Q8N111 149 aa13.13□□□□□ -0.31
SNX2-213ENST00000514949 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP13.13□□□□□ -0.314e-10■■■■■ 30.8
SNX2-213ENST00000514949 GCSHP23434 173 aa13.13□□□□□ -0.31
SNX2-213ENST00000514949 MAPKAPK5-AS1Q8N8E1 139 aa13.13□□□□□ -0.31
SNX2-213ENST00000514949 PHLDA1Q8WV24 401 aaPredicted RBP13.13□□□□□ -0.31
SNX2-213ENST00000514949 MUC4Q99102 2169 aa13.13□□□□□ -0.31
SNX2-213ENST00000514949 LINC01549A6NIU2 74 aa13.12□□□□□ -0.31
SNX2-213ENST00000514949 SPRY2O43597 315 aa13.12□□□□□ -0.31
SNX2-213ENST00000514949 OR5A1Q8NGJ0 315 aa13.12□□□□□ -0.31
SNX2-213ENST00000514949 CHTOPQ9Y3Y2 248 aaKnown RBP13.12□□□□□ -0.31
SNX2-213ENST00000514949 C2orf66Q6UXQ4 117 aa13.12□□□□□ -0.31
SNX2-213ENST00000514949 SPG11Q96JI7 2443 aa13.11□□□□□ -0.31
SNX2-213ENST00000514949 IGKV3-7A0A075B6H7 116 aa13.1□□□□□ -0.31
SNX2-213ENST00000514949 FAM159AQ6UWV7 190 aa13.1□□□□□ -0.31
SNX2-213ENST00000514949 RAB37Q96AX2 223 aa13.1□□□□□ -0.31
SNX2-213ENST00000514949 MGPP08493 103 aa13.1□□□□□ -0.31
SNX2-213ENST00000514949 SAMD5Q5TGI4 173 aa13.1□□□□□ -0.31
SNX2-213ENST00000514949 BAALCQ8WXS3 180 aa13.1□□□□□ -0.31
SNX2-213ENST00000514949 K7ERU9 68 aa13.09□□□□□ -0.31
SNX2-213ENST00000514949 FABP2P12104 132 aa13.09□□□□□ -0.31
SNX2-213ENST00000514949 PCP4P48539 62 aa13.09□□□□□ -0.31
SNX2-213ENST00000514949 POLR2KP53803 58 aaKnown RBP13.09□□□□□ -0.31
SNX2-213ENST00000514949 CSTL1Q9H114 145 aa13.09□□□□□ -0.31
SNX2-213ENST00000514949 CELSR2Q9HCU4 2923 aa13.09□□□□□ -0.31
SNX2-213ENST00000514949 EDN2P20800 178 aa13.09□□□□□ -0.31
SNX2-213ENST00000514949 SPCS1Q9Y6A9 102 aa13.09□□□□□ -0.31
SNX2-213ENST00000514949 SRD5A1P18405 259 aa13.08□□□□□ -0.32
SNX2-213ENST00000514949 IGHV4-59P01825 116 aa13.07□□□□□ -0.32
SNX2-213ENST00000514949 TMEM95Q3KNT9 176 aa13.07□□□□□ -0.32
SNX2-213ENST00000514949 NAA38Q9BRA0 125 aaKnown RBP13.07□□□□□ -0.32
SNX2-213ENST00000514949 PRSS29PA6NIE9 313 aa13.07□□□□□ -0.32
SNX2-213ENST00000514949 E9PLD3 99 aa13.07□□□□□ -0.32
SNX2-213ENST00000514949 J3QLI3 93 aa13.07□□□□□ -0.32
SNX2-213ENST00000514949 DEFB112Q30KQ8 113 aa13.07□□□□□ -0.32
SNX2-213ENST00000514949 LINC01356Q8N9X3 169 aa13.07□□□□□ -0.32
SNX2-213ENST00000514949 CACNA1AO00555 2505 aa13.07□□□□□ -0.32
SNX2-213ENST00000514949 TRBV6-5A0A0K0K1A5 114 aa13.06□□□□□ -0.32
SNX2-213ENST00000514949 MYMXA0A1B0GTQ4 84 aa13.06□□□□□ -0.32
SNX2-213ENST00000514949 OR11H12B2RN74 326 aa13.06□□□□□ -0.32
SNX2-213ENST00000514949 OR11H1Q8NG94 326 aa13.06□□□□□ -0.32
SNX2-213ENST00000514949 OR11H2Q8NH07 326 aa13.06□□□□□ -0.32
SNX2-213ENST00000514949 C9orf85Q96MD7 179 aa13.06□□□□□ -0.32
SNX2-213ENST00000514949 FLNCQ14315 2725 aa13.06□□□□□ -0.32
SNX2-213ENST00000514949 CSPG4Q6UVK1 2322 aa13.06□□□□□ -0.32
SNX2-213ENST00000514949 TRBV7-3A0A075B6L6 115 aa13.06□□□□□ -0.32
SNX2-213ENST00000514949 A0A096LNT2 108 aa13.06□□□□□ -0.32
SNX2-213ENST00000514949 A0A0J9YX75 114 aa13.06□□□□□ -0.32
SNX2-213ENST00000514949 NEGR1Q7Z3B1 354 aa13.06□□□□□ -0.32
SNX2-213ENST00000514949 RNF152Q8N8N0 203 aa13.06□□□□□ -0.32
SNX2-213ENST00000514949 CYSLTR1Q9Y271 337 aa13.06□□□□□ -0.32
SNX2-213ENST00000514949 USP9XQ93008 2570 aaPredicted RBP13.05□□□□□ -0.32
SNX2-213ENST00000514949 IGIPA6NJ69 53 aa13.05□□□□□ -0.32
SNX2-213ENST00000514949 K7EQG2 157 aa13.05□□□□□ -0.32
SNX2-213ENST00000514949 LGALS9O00182 355 aa13.05□□□□□ -0.32
SNX2-213ENST00000514949 VCYO14598 125 aa13.05□□□□□ -0.32
SNX2-213ENST00000514949 SUMO4Q6EEV6 95 aa13.05□□□□□ -0.32
SNX2-213ENST00000514949 IGHV3-16A0A0C4DH30 117 aa13.04□□□□□ -0.32
SNX2-213ENST00000514949 CD7P09564 240 aa13.04□□□□□ -0.32
SNX2-213ENST00000514949 RNF151Q2KHN1 245 aa13.04□□□□□ -0.32
SNX2-213ENST00000514949 NHP2Q9NX24 153 aaKnown RBP13.04□□□□□ -0.32
SNX2-213ENST00000514949 MAP1AP78559 2803 aaPredicted RBP13.04□□□□□ -0.32
SNX2-213ENST00000514949 TRAV12-3A0A0B4J271 114 aa13.04□□□□□ -0.32
SNX2-213ENST00000514949 TRBV27A0A0K0K1C4 114 aa13.04□□□□□ -0.32
SNX2-213ENST00000514949 A0A1B0GWB2 263 aa13.04□□□□□ -0.32
SNX2-213ENST00000514949 CRYGDP07320 174 aa13.04□□□□□ -0.32
SNX2-213ENST00000514949 SNRPD3P62318 126 aaKnown RBP13.04□□□□□ -0.32
SNX2-213ENST00000514949 ZFP2Q6ZN57 461 aa13.04□□□□□ -0.32
SNX2-213ENST00000514949 AGRNO00468 2067 aa13.03□□□□□ -0.32
SNX2-213ENST00000514949 K7ERJ3 54 aa13.03□□□□□ -0.32
SNX2-213ENST00000514949 TSHBP01222 138 aa13.03□□□□□ -0.32
SNX2-213ENST00000514949 RIPPLY3P57055 190 aa13.03□□□□□ -0.32
SNX2-213ENST00000514949 PAPPA-AS1Q5QFB9 102 aa13.03□□□□□ -0.32
SNX2-213ENST00000514949 DUSP14O95147 198 aaKnown RBP13.03□□□□□ -0.32
SNX2-213ENST00000514949 TMEM141Q96I45 108 aa13.03□□□□□ -0.32
SNX2-213ENST00000514949 SELENOKQ9Y6D0 94 aa13.03□□□□□ -0.32
SNX2-213ENST00000514949 C12orf74Q32Q52 190 aa13.02□□□□□ -0.33
SNX2-213ENST00000514949 TIMM17AQ99595 171 aa13.02□□□□□ -0.33
SNX2-213ENST00000514949 JPT2Q9H910 190 aa13.02□□□□□ -0.33
SNX2-213ENST00000514949 IGLL5B9A064 214 aa13.01□□□□□ -0.33
SNX2-213ENST00000514949 ZNF688P0C7X2 276 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 112.4 ms