RNA–Protein interactions for RNA: ENST00000514515.5

NREP-222, Transcript of neuronal regeneration related protein, human

TSL 1 (best)

Gene NREP, Length 3,564 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NREP-222	ENST00000514515	TP53TG1	Q9Y2A0	90 aa		4.83	□□□□□ -1.64
NREP-222	ENST00000514515	ZNF256	Q9Y2P7	627 aa	Predicted RBP	4.83	□□□□□ -1.64
NREP-222	ENST00000514515	TRAV8-2	A0A0B4J237	113 aa		4.83	□□□□□ -1.64
NREP-222	ENST00000514515	LINC01546	A6NGU7	62 aa		4.83	□□□□□ -1.64
NREP-222	ENST00000514515		M0R1W7	72 aa		4.83	□□□□□ -1.64
NREP-222	ENST00000514515	PRR9	Q5T870	116 aa		4.83	□□□□□ -1.64
NREP-222	ENST00000514515	NFE4	Q86UQ8	179 aa		4.83	□□□□□ -1.64
NREP-222	ENST00000514515	TMEM219	Q86XT9	240 aa		4.83	□□□□□ -1.64
NREP-222	ENST00000514515		Q8N9W7	124 aa		4.83	□□□□□ -1.64
NREP-222	ENST00000514515	NEXN-AS1	Q8NBZ9	246 aa		4.83	□□□□□ -1.64
NREP-222	ENST00000514515	LY6G5B	Q8NDX9	201 aa		4.83	□□□□□ -1.64
NREP-222	ENST00000514515	PRO0461	Q9UI25	63 aa		4.83	□□□□□ -1.64
NREP-222	ENST00000514515		A0A087WWL8	130 aa		4.82	□□□□□ -1.64
NREP-222	ENST00000514515	IGHV3-11	P01762	117 aa		4.82	□□□□□ -1.64
NREP-222	ENST00000514515	LGALS3	P17931	250 aa	Known RBP	4.82	□□□□□ -1.64
NREP-222	ENST00000514515	CFAP126	Q5VTH2	177 aa		4.82	□□□□□ -1.64
NREP-222	ENST00000514515	FAM110D	Q8TAY7	271 aa	Predicted RBP	4.82	□□□□□ -1.64
NREP-222	ENST00000514515	ZFAND3	Q9H8U3	227 aa		4.82	□□□□□ -1.64
NREP-222	ENST00000514515	MSRB2	Q9Y3D2	182 aa		4.82	□□□□□ -1.64
NREP-222	ENST00000514515	ASH1L	Q9NR48	2969 aa	Known RBP	4.82	□□□□□ -1.64
NREP-222	ENST00000514515	C11orf86	A6NJI1	115 aa		4.82	□□□□□ -1.64
NREP-222	ENST00000514515	PPDPFL	Q8WWR9	84 aa		4.82	□□□□□ -1.64
NREP-222	ENST00000514515	KIR2DL4	Q99706	377 aa		4.82	□□□□□ -1.64
NREP-222	ENST00000514515	ANAPC13	Q9BS18	74 aa		4.82	□□□□□ -1.64
NREP-222	ENST00000514515	RELN	P78509	3460 aa		4.82	□□□□□ -1.64
NREP-222	ENST00000514515	TRAV2	A0A0B4J234	112 aa		4.81	□□□□□ -1.64
NREP-222	ENST00000514515	CCL21	O00585	134 aa		4.81	□□□□□ -1.64
NREP-222	ENST00000514515	XG	P55808	180 aa		4.81	□□□□□ -1.64
NREP-222	ENST00000514515	RPL39	P62891	51 aa	Known RBP	4.81	□□□□□ -1.64
NREP-222	ENST00000514515	CCDC140	Q96MF4	163 aa		4.81	□□□□□ -1.64
NREP-222	ENST00000514515	MAP1A	P78559	2803 aa	Predicted RBP	4.81	□□□□□ -1.64
NREP-222	ENST00000514515	CLPSL1	A2RUU4	121 aa		4.81	□□□□□ -1.64
NREP-222	ENST00000514515	ODF3B	A8MYP8	253 aa		4.81	□□□□□ -1.64
NREP-222	ENST00000514515		C9JAW5	83 aa		4.81	□□□□□ -1.64
NREP-222	ENST00000514515	TCL1B	O95988	128 aa		4.81	□□□□□ -1.64
NREP-222	ENST00000514515	IGKV3-20	P01619	116 aa		4.81	□□□□□ -1.64
NREP-222	ENST00000514515	SMCP	P49901	116 aa	Predicted RBP	4.81	□□□□□ -1.64
NREP-222	ENST00000514515	TCTEX1D4	Q5JR98	221 aa		4.81	□□□□□ -1.64
NREP-222	ENST00000514515	C9orf47	Q6ZRZ4	202 aa		4.81	□□□□□ -1.64
NREP-222	ENST00000514515		Q6ZUT4	128 aa		4.81	□□□□□ -1.64
NREP-222	ENST00000514515		Q8NA96	180 aa		4.81	□□□□□ -1.64
NREP-222	ENST00000514515	UBTD1	Q9HAC8	227 aa		4.81	□□□□□ -1.64
NREP-222	ENST00000514515	PRSS2	P07478	247 aa		4.81	□□□□□ -1.64
NREP-222	ENST00000514515	SAA4	P35542	130 aa		4.81	□□□□□ -1.64
NREP-222	ENST00000514515	TEN1	Q86WV5	123 aa		4.81	□□□□□ -1.64
NREP-222	ENST00000514515	TEX29	Q8N6K0	151 aa		4.81	□□□□□ -1.64
NREP-222	ENST00000514515	IGF2R	P11717	2491 aa		4.81	□□□□□ -1.64
NREP-222	ENST00000514515	NOTCH3	Q9UM47	2321 aa		4.81	□□□□□ -1.64
NREP-222	ENST00000514515	IGHV4-39	P01824	125 aa		4.8	□□□□□ -1.64
NREP-222	ENST00000514515	ZFP36	P26651	326 aa	Known RBP	4.8	□□□□□ -1.64
NREP-222	ENST00000514515	MINOS1	Q5TGZ0	78 aa		4.8	□□□□□ -1.64
NREP-222	ENST00000514515	FAM159A	Q6UWV7	190 aa		4.8	□□□□□ -1.64
NREP-222	ENST00000514515	NDUFA11	Q86Y39	141 aa		4.8	□□□□□ -1.64
NREP-222	ENST00000514515	C20orf173	Q96LM9	149 aa		4.8	□□□□□ -1.64
NREP-222	ENST00000514515	LINC00477	Q96M19	166 aa		4.8	□□□□□ -1.64
NREP-222	ENST00000514515	CDIP1	Q9H305	208 aa		4.8	□□□□□ -1.64
NREP-222	ENST00000514515	JPT2	Q9H910	190 aa		4.8	□□□□□ -1.64
NREP-222	ENST00000514515	MINOS1-NBL1	R4GNA1	71 aa		4.8	□□□□□ -1.64
NREP-222	ENST00000514515	PTPRQ	Q9UMZ3	2332 aa		4.8	□□□□□ -1.64
NREP-222	ENST00000514515	SORL1	Q92673	2214 aa		4.8	□□□□□ -1.64
NREP-222	ENST00000514515		Q6ZS46	218 aa		4.8	□□□□□ -1.64
NREP-222	ENST00000514515	C9orf139	Q6ZV77	190 aa		4.8	□□□□□ -1.64
NREP-222	ENST00000514515	RNF183	Q96D59	192 aa		4.8	□□□□□ -1.64
NREP-222	ENST00000514515	PRO1854	Q9UHT4	67 aa		4.8	□□□□□ -1.64
NREP-222	ENST00000514515	TRBV7-1	A0A0A6YYK4	115 aa		4.8	□□□□□ -1.64
NREP-222	ENST00000514515	PPP1R17	O96001	155 aa		4.8	□□□□□ -1.64
NREP-222	ENST00000514515	ZNF688	P0C7X2	276 aa		4.8	□□□□□ -1.64
NREP-222	ENST00000514515	PMVK	Q15126	192 aa		4.8	□□□□□ -1.64
NREP-222	ENST00000514515	ZFAND6	Q6FIF0	208 aa		4.8	□□□□□ -1.64
NREP-222	ENST00000514515	ANKRD29	Q8N6D5	301 aa		4.8	□□□□□ -1.64
NREP-222	ENST00000514515	PSMG3-AS1	Q96PY0	264 aa		4.8	□□□□□ -1.64
NREP-222	ENST00000514515	TRBV20-1	A0A075B6N2	111 aa		4.79	□□□□□ -1.64
NREP-222	ENST00000514515		A0A0J9YY99	117 aa		4.79	□□□□□ -1.64
NREP-222	ENST00000514515	OOSP1	A8MZH6	123 aa		4.79	□□□□□ -1.64
NREP-222	ENST00000514515	CD7	P09564	240 aa		4.79	□□□□□ -1.64
NREP-222	ENST00000514515	ZNF56	Q15929	161 aa		4.79	□□□□□ -1.64
NREP-222	ENST00000514515	LY6E	Q16553	131 aa		4.79	□□□□□ -1.64
NREP-222	ENST00000514515	PAPPA-AS1	Q5QFB9	102 aa		4.79	□□□□□ -1.64
NREP-222	ENST00000514515	SDHAF1	A6NFY7	115 aa		4.79	□□□□□ -1.64
NREP-222	ENST00000514515	PRSS47	A8MTI9	375 aa		4.79	□□□□□ -1.64
NREP-222	ENST00000514515	OVOL1	O14753	267 aa		4.79	□□□□□ -1.64
NREP-222	ENST00000514515	SLC25A20	O43772	301 aa		4.79	□□□□□ -1.64
NREP-222	ENST00000514515	SNCG	O76070	127 aa		4.79	□□□□□ -1.64
NREP-222	ENST00000514515	CFC1B	P0CG36	223 aa		4.79	□□□□□ -1.64
NREP-222	ENST00000514515	CFC1	P0CG37	223 aa		4.79	□□□□□ -1.64
NREP-222	ENST00000514515	PF4V1	P10720	104 aa		4.79	□□□□□ -1.64
NREP-222	ENST00000514515	HTN1	P15515	57 aa		4.79	□□□□□ -1.64
NREP-222	ENST00000514515	UBE2D1	P51668	147 aa		4.79	□□□□□ -1.64
NREP-222	ENST00000514515	UNQ9165/PRO28630	Q6UXU0	137 aa		4.79	□□□□□ -1.64
NREP-222	ENST00000514515	TRPT1	Q86TN4	253 aa	Known RBP	4.79	□□□□□ -1.64
NREP-222	ENST00000514515	C10orf126	Q8N4M7	172 aa		4.79	□□□□□ -1.64
NREP-222	ENST00000514515		Q8N6K4	173 aa		4.79	□□□□□ -1.64
NREP-222	ENST00000514515	ATP6V0E2	Q8NHE4	81 aa		4.79	□□□□□ -1.64
NREP-222	ENST00000514515	OPRPN	Q99935	248 aa	Predicted RBP	4.79	□□□□□ -1.64
NREP-222	ENST00000514515	ERG28	Q9UKR5	140 aa		4.79	□□□□□ -1.64
NREP-222	ENST00000514515	IGHV4-4	A0A075B6R2	117 aa		4.79	□□□□□ -1.64
NREP-222	ENST00000514515	TRAV41	A0A0B4J266	112 aa		4.79	□□□□□ -1.64
NREP-222	ENST00000514515		A4D1N5	150 aa		4.79	□□□□□ -1.64
NREP-222	ENST00000514515		J3QQQ9	107 aa		4.79	□□□□□ -1.64
NREP-222	ENST00000514515	VCY	O14598	125 aa		4.79	□□□□□ -1.64

Retrieved 100 of 20,778 RNA–protein pairs in 679.1 ms