RNA–Protein interactions for RNA: ENST00000514439.1

CPNE4-211, Transcript of copine 4, humanhuman

TSL 1 (best)

Gene CPNE4, Length 2,312 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-211ENST00000514439 FAM159AQ6UWV7 190 aa6.12□□□□□ -1.43
CPNE4-211ENST00000514439 WFDC11Q8NEX6 87 aa6.12□□□□□ -1.43
CPNE4-211ENST00000514439 TRAV12-3A0A0B4J271 114 aa6.11□□□□□ -1.43
CPNE4-211ENST00000514439 C7orf71A4D174 169 aa6.11□□□□□ -1.43
CPNE4-211ENST00000514439 NXPH4O95158 308 aa6.11□□□□□ -1.43
CPNE4-211ENST00000514439 IGKV3-20P01619 116 aa6.11□□□□□ -1.43
CPNE4-211ENST00000514439 COX8AP10176 69 aa6.11□□□□□ -1.43
CPNE4-211ENST00000514439 ZNF25P17030 456 aaPredicted RBP6.11□□□□□ -1.43
CPNE4-211ENST00000514439 SLURP1P55000 103 aa6.11□□□□□ -1.43
CPNE4-211ENST00000514439 LAGE3Q14657 143 aa6.11□□□□□ -1.43
CPNE4-211ENST00000514439 HIST2H2BCQ6DN03 193 aa6.11□□□□□ -1.43
CPNE4-211ENST00000514439 ADAMTSL5Q6ZMM2 481 aa6.11□□□□□ -1.43
CPNE4-211ENST00000514439 RASL10AQ92737 203 aa6.11□□□□□ -1.43
CPNE4-211ENST00000514439 AP1S3Q96PC3 154 aa6.11□□□□□ -1.43
CPNE4-211ENST00000514439 ODF3Q96PU9 254 aa6.11□□□□□ -1.43
CPNE4-211ENST00000514439 SMIM2Q9BVW6 85 aa6.11□□□□□ -1.43
CPNE4-211ENST00000514439 DKK2Q9UBU2 259 aa6.11□□□□□ -1.43
CPNE4-211ENST00000514439 NBPF19A0A087WUL8 3843 aa6.11□□□□□ -1.43
CPNE4-211ENST00000514439 MGPP08493 103 aa6.11□□□□□ -1.43
CPNE4-211ENST00000514439 SMIM17P0DL12 118 aa6.11□□□□□ -1.43
CPNE4-211ENST00000514439 TCTEX1D4Q5JR98 221 aa6.11□□□□□ -1.43
CPNE4-211ENST00000514439 DPF1Q92782 380 aa6.11□□□□□ -1.43
CPNE4-211ENST00000514439 TLN2Q9Y4G6 2542 aa6.11□□□□□ -1.43
CPNE4-211ENST00000514439 ZNF469Q96JG9 3925 aaPredicted RBP6.11□□□□□ -1.43
CPNE4-211ENST00000514439 TRAV12-2A0A075B6T6 113 aa6.1□□□□□ -1.43
CPNE4-211ENST00000514439 CD7P09564 240 aa6.1□□□□□ -1.43
CPNE4-211ENST00000514439 ODF1Q14990 250 aa6.1□□□□□ -1.43
CPNE4-211ENST00000514439 MPV17L2Q567V2 206 aa6.1□□□□□ -1.43
CPNE4-211ENST00000514439 RPL39LQ96EH5 51 aaKnown RBP6.1□□□□□ -1.43
CPNE4-211ENST00000514439 TMEM208Q9BTX3 173 aa6.1□□□□□ -1.43
CPNE4-211ENST00000514439 ITPR3Q14573 2671 aa6.1□□□□□ -1.43
CPNE4-211ENST00000514439 PRSS1P07477 247 aa6.1□□□□□ -1.43
CPNE4-211ENST00000514439 TCTAP57738 103 aa6.1□□□□□ -1.43
CPNE4-211ENST00000514439 SUMO2P61956 95 aaKnown RBP6.1□□□□□ -1.43
CPNE4-211ENST00000514439 OR1N2Q8NGR9 330 aa6.1□□□□□ -1.43
CPNE4-211ENST00000514439 C20orf78Q9BR46 151 aa6.1□□□□□ -1.43
CPNE4-211ENST00000514439 MYO9AB2RTY4 2548 aa6.1□□□□□ -1.43
CPNE4-211ENST00000514439 LINC01619G3V211 115 aa6.09□□□□□ -1.43
CPNE4-211ENST00000514439 NUDT3O95989 172 aa6.09□□□□□ -1.43
CPNE4-211ENST00000514439 FGF6P10767 208 aa6.09□□□□□ -1.43
CPNE4-211ENST00000514439 CDKN1BP46527 198 aa6.09□□□□□ -1.43
CPNE4-211ENST00000514439 SPINK13Q1W4C9 94 aa6.09□□□□□ -1.43
CPNE4-211ENST00000514439 KHDC1LQ5JSQ8 128 aa6.09□□□□□ -1.43
CPNE4-211ENST00000514439 C2orf91Q6ZV80 131 aa6.09□□□□□ -1.43
CPNE4-211ENST00000514439 OR11H1Q8NG94 326 aa6.09□□□□□ -1.43
CPNE4-211ENST00000514439 C4orf3Q8WVX3 66 aa6.09□□□□□ -1.43
CPNE4-211ENST00000514439 DUX3Q96PT4 197 aa6.09□□□□□ -1.43
CPNE4-211ENST00000514439 FOXC2Q99958 501 aa6.09□□□□□ -1.43
CPNE4-211ENST00000514439 KIF25-AS1Q9Y6Z4 181 aa6.09□□□□□ -1.43
CPNE4-211ENST00000514439 CCDC168Q8NDH2 2452 aa6.09□□□□□ -1.43
CPNE4-211ENST00000514439 ATP5LO75964 103 aa6.09□□□□□ -1.43
CPNE4-211ENST00000514439 DUSP14O95147 198 aaKnown RBP6.09□□□□□ -1.43
CPNE4-211ENST00000514439 LINC00315P59091 139 aa6.09□□□□□ -1.43
CPNE4-211ENST00000514439 FOXI2Q6ZQN5 318 aa6.09□□□□□ -1.43
CPNE4-211ENST00000514439 TMEM86BQ8N661 226 aa6.09□□□□□ -1.43
CPNE4-211ENST00000514439 POM121L12Q8N7R1 296 aa6.09□□□□□ -1.43
CPNE4-211ENST00000514439 JPT2Q9H910 190 aa6.09□□□□□ -1.43
CPNE4-211ENST00000514439 MUC4Q99102 2169 aa6.09□□□□□ -1.44
CPNE4-211ENST00000514439 SONP18583 2426 aaKnown RBP6.08□□□□□ -1.44
CPNE4-211ENST00000514439 IGHV3-16A0A0C4DH30 117 aa6.08□□□□□ -1.44
CPNE4-211ENST00000514439 DLEU1O43261 78 aa6.08□□□□□ -1.44
CPNE4-211ENST00000514439 BVES-AS1Q5T3Y7 98 aa6.08□□□□□ -1.44
CPNE4-211ENST00000514439 HIST2H2BDQ6DRA6 164 aa6.08□□□□□ -1.44
CPNE4-211ENST00000514439 AMTNQ6UX39 209 aa6.08□□□□□ -1.44
CPNE4-211ENST00000514439 C9orf85Q96MD7 179 aa6.08□□□□□ -1.44
CPNE4-211ENST00000514439 ZMAT4Q9H898 229 aa6.08□□□□□ -1.44
CPNE4-211ENST00000514439 TENM4Q6N022 2769 aa6.08□□□□□ -1.44
CPNE4-211ENST00000514439 DNAJC9-AS1A6NH13 148 aa6.08□□□□□ -1.44
CPNE4-211ENST00000514439 ORMDL2Q53FV1 153 aa6.08□□□□□ -1.44
CPNE4-211ENST00000514439 C12orf54Q6X4T0 127 aa6.08□□□□□ -1.44
CPNE4-211ENST00000514439 Q6ZSV7 163 aa6.08□□□□□ -1.44
CPNE4-211ENST00000514439 BOD1L2Q8IYS8 172 aa6.08□□□□□ -1.44
CPNE4-211ENST00000514439 Q8N1Y9 231 aa6.08□□□□□ -1.44
CPNE4-211ENST00000514439 OR9G4Q8NGQ1 327 aa6.08□□□□□ -1.44
CPNE4-211ENST00000514439 MDFICQ9P1T7 246 aa6.08□□□□□ -1.44
CPNE4-211ENST00000514439 IGHV1OR15-1A0A075B7D0 117 aa6.07□□□□□ -1.44
CPNE4-211ENST00000514439 A0A087WWL8 130 aa6.07□□□□□ -1.44
CPNE4-211ENST00000514439 KNCNA6PVL3 124 aa6.07□□□□□ -1.44
CPNE4-211ENST00000514439 IGKCP01834 107 aa6.07□□□□□ -1.44
CPNE4-211ENST00000514439 GAGE1Q13065 139 aa6.07□□□□□ -1.44
CPNE4-211ENST00000514439 Q6ZVH6 145 aa6.07□□□□□ -1.44
CPNE4-211ENST00000514439 TEX29Q8N6K0 151 aa6.07□□□□□ -1.44
CPNE4-211ENST00000514439 KLHL30-AS1Q8NEE0 82 aa6.07□□□□□ -1.44
CPNE4-211ENST00000514439 PEMTQ9UBM1 199 aa6.07□□□□□ -1.44
CPNE4-211ENST00000514439 AGRNO00468 2067 aa6.07□□□□□ -1.44
CPNE4-211ENST00000514439 CHD6Q8TD26 2715 aa6.07□□□□□ -1.44
CPNE4-211ENST00000514439 PPP1R17O96001 155 aa6.07□□□□□ -1.44
CPNE4-211ENST00000514439 NMUP48645 174 aa6.07□□□□□ -1.44
CPNE4-211ENST00000514439 DEFB131AP59861 70 aa6.07□□□□□ -1.44
CPNE4-211ENST00000514439 PCP2Q8IVA1 136 aa6.07□□□□□ -1.44
CPNE4-211ENST00000514439 TMEM61Q8N0U2 210 aa6.07□□□□□ -1.44
CPNE4-211ENST00000514439 DLX4Q92988 240 aaPredicted RBP6.07□□□□□ -1.44
CPNE4-211ENST00000514439 TOMM6Q96B49 74 aa6.07□□□□□ -1.44
CPNE4-211ENST00000514439 CSTL1Q9H114 145 aa6.07□□□□□ -1.44
CPNE4-211ENST00000514439 HHLA3Q9XRX5 114 aa6.07□□□□□ -1.44
CPNE4-211ENST00000514439 SORL1Q92673 2214 aa6.06□□□□□ -1.44
CPNE4-211ENST00000514439 FLNAP21333 2647 aaKnown RBP6.06□□□□□ -1.44
CPNE4-211ENST00000514439 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP6.06□□□□□ -1.44
CPNE4-211ENST00000514439 K7EMI3 77 aa6.06□□□□□ -1.44
CPNE4-211ENST00000514439 DPM2O94777 84 aa6.06□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms