RNA–Protein interactions for RNA: ENST00000514271.2

CLIP1-205, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 2

Gene CLIP1, Length 3,493 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-205ENST00000514271 GAGE12HA6NDE8 117 aa5.62□□□□□ -1.51
CLIP1-205ENST00000514271 NXPH4O95158 308 aa5.62□□□□□ -1.51
CLIP1-205ENST00000514271 C19orf54Q5BKX5 351 aa5.62□□□□□ -1.51
CLIP1-205ENST00000514271 LINC00336Q6ZUF6 198 aa5.62□□□□□ -1.51
CLIP1-205ENST00000514271 BPIFA4PQ86YQ2 179 aa5.62□□□□□ -1.51
CLIP1-205ENST00000514271 NPBQ8NG41 125 aa5.62□□□□□ -1.51
CLIP1-205ENST00000514271 UTP20O75691 2785 aaKnown RBP5.62□□□□□ -1.51
CLIP1-205ENST00000514271 ROS1P08922 2347 aa5.62□□□□□ -1.51
CLIP1-205ENST00000514271 ABCA2Q9BZC7 2435 aa5.62□□□□□ -1.51
CLIP1-205ENST00000514271 A6NDN8 102 aa5.62□□□□□ -1.51
CLIP1-205ENST00000514271 DNAJC9-AS1A6NH13 148 aa5.62□□□□□ -1.51
CLIP1-205ENST00000514271 H3BMG7 143 aa5.62□□□□□ -1.51
CLIP1-205ENST00000514271 P01737 135 aa5.62□□□□□ -1.51
CLIP1-205ENST00000514271 BCL6BQ8N143 479 aaPredicted RBP5.62□□□□□ -1.51
CLIP1-205ENST00000514271 SMR3AQ99954 134 aa5.62□□□□□ -1.51
CLIP1-205ENST00000514271 RBAKDNA6NC62 111 aa5.61□□□□□ -1.51
CLIP1-205ENST00000514271 HBDP02042 147 aa5.61□□□□□ -1.51
CLIP1-205ENST00000514271 MGST1P10620 155 aaKnown RBP5.61□□□□□ -1.51
CLIP1-205ENST00000514271 FCER1GP30273 86 aa5.61□□□□□ -1.51
CLIP1-205ENST00000514271 IGHV1-3A0A0C4DH29 117 aa5.61□□□□□ -1.51
CLIP1-205ENST00000514271 D6R8Y8 96 aa5.61□□□□□ -1.51
CLIP1-205ENST00000514271 H3BUT2 72 aa5.61□□□□□ -1.51
CLIP1-205ENST00000514271 ZNF415Q09FC8 603 aa5.61□□□□□ -1.51
CLIP1-205ENST00000514271 FAM104AQ969W3 186 aa5.61□□□□□ -1.51
CLIP1-205ENST00000514271 C8orf49Q96NF6 230 aa5.61□□□□□ -1.51
CLIP1-205ENST00000514271 MALRD1Q5VYJ5 2156 aa5.61□□□□□ -1.51
CLIP1-205ENST00000514271 TRAV8-1A0A0A6YYK1 113 aa5.61□□□□□ -1.51
CLIP1-205ENST00000514271 INSL3P51460 131 aa5.61□□□□□ -1.51
CLIP1-205ENST00000514271 SAMD5Q5TGI4 173 aa5.61□□□□□ -1.51
CLIP1-205ENST00000514271 CRYGDP07320 174 aa5.6□□□□□ -1.51
CLIP1-205ENST00000514271 EGR2P11161 476 aaPredicted RBP5.6□□□□□ -1.51
CLIP1-205ENST00000514271 KLRD1Q13241 179 aa5.6□□□□□ -1.51
CLIP1-205ENST00000514271 DEFB121Q5J5C9 76 aa5.6□□□□□ -1.51
CLIP1-205ENST00000514271 C10orf55Q5SWW7 151 aa5.6□□□□□ -1.51
CLIP1-205ENST00000514271 SERTAD4-AS1Q5TG53 156 aa5.6□□□□□ -1.51
CLIP1-205ENST00000514271 SPATA3Q8NHX4 192 aa5.6□□□□□ -1.51
CLIP1-205ENST00000514271 CRIP2P52943 208 aaPredicted RBP5.6□□□□□ -1.51
CLIP1-205ENST00000514271 WFDC2Q14508 124 aa5.6□□□□□ -1.51
CLIP1-205ENST00000514271 NEXN-AS1Q8NBZ9 246 aa5.6□□□□□ -1.51
CLIP1-205ENST00000514271 RNF183Q96D59 192 aa5.6□□□□□ -1.51
CLIP1-205ENST00000514271 CHAC1Q9BUX1 264 aa5.6□□□□□ -1.51
CLIP1-205ENST00000514271 SIGLEC9Q9Y336 463 aa5.6□□□□□ -1.51
CLIP1-205ENST00000514271 U3KQE9 123 aa5.6□□□□□ -1.51
CLIP1-205ENST00000514271 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP5.6□□□□□ -1.51
CLIP1-205ENST00000514271 ZNF207O43670 478 aaKnown RBP5.6□□□□□ -1.51
CLIP1-205ENST00000514271 TMEM78Q5T7P6 136 aa5.6□□□□□ -1.51
CLIP1-205ENST00000514271 FANCD2OSQ96PS1 177 aa5.6□□□□□ -1.51
CLIP1-205ENST00000514271 MAP1LC3AQ9H492 121 aa5.6□□□□□ -1.51
CLIP1-205ENST00000514271 C11orf21Q9P2W6 132 aa5.6□□□□□ -1.51
CLIP1-205ENST00000514271 COL12A1Q99715 3063 aa5.59□□□□□ -1.51
CLIP1-205ENST00000514271 IGLV11-55A0A075B6I3 123 aa5.59□□□□□ -1.51
CLIP1-205ENST00000514271 CLPSL1A2RUU4 121 aa5.59□□□□□ -1.51
CLIP1-205ENST00000514271 COX7A2P2O60397 106 aa5.59□□□□□ -1.51
CLIP1-205ENST00000514271 RRN3P1Q2M238 152 aa5.59□□□□□ -1.51
CLIP1-205ENST00000514271 EXOC3-AS1Q8N2X6 119 aa5.59□□□□□ -1.51
CLIP1-205ENST00000514271 IFI27L1Q96BM0 104 aa5.59□□□□□ -1.51
CLIP1-205ENST00000514271 THYN1Q9P016 225 aa5.59□□□□□ -1.51
CLIP1-205ENST00000514271 LINC01548A6NM66 108 aa5.59□□□□□ -1.51
CLIP1-205ENST00000514271 B5MCH6 92 aa5.59□□□□□ -1.51
CLIP1-205ENST00000514271 H3BUA1 57 aa5.59□□□□□ -1.51
CLIP1-205ENST00000514271 HOXA3O43365 443 aaPredicted RBP5.59□□□□□ -1.51
CLIP1-205ENST00000514271 VMA21Q3ZAQ7 101 aa5.59□□□□□ -1.51
CLIP1-205ENST00000514271 LYZL1Q6UWQ5 148 aa5.59□□□□□ -1.51
CLIP1-205ENST00000514271 BRD3OSQ6XYD6 125 aa5.59□□□□□ -1.51
CLIP1-205ENST00000514271 SPCS1Q9Y6A9 102 aa5.59□□□□□ -1.51
CLIP1-205ENST00000514271 H3BUX3 64 aa5.58□□□□□ -1.52
CLIP1-205ENST00000514271 TSHBP01222 138 aa5.58□□□□□ -1.52
CLIP1-205ENST00000514271 VPREB1P12018 145 aa5.58□□□□□ -1.52
CLIP1-205ENST00000514271 CACNG7P62955 275 aa5.58□□□□□ -1.52
CLIP1-205ENST00000514271 C12orf74Q32Q52 190 aa5.58□□□□□ -1.52
CLIP1-205ENST00000514271 AMN1Q8IY45 258 aa5.58□□□□□ -1.52
CLIP1-205ENST00000514271 Q8N8P6 123 aa5.58□□□□□ -1.52
CLIP1-205ENST00000514271 DUX3Q96PT4 197 aa5.58□□□□□ -1.52
CLIP1-205ENST00000514271 PRR25Q96S07 402 aa5.58□□□□□ -1.52
CLIP1-205ENST00000514271 ITPR2Q14571 2701 aa5.58□□□□□ -1.52
CLIP1-205ENST00000514271 CREBBPQ92793 2442 aa5.58□□□□□ -1.52
CLIP1-205ENST00000514271 IGLV4-69A0A075B6H9 119 aa5.58□□□□□ -1.52
CLIP1-205ENST00000514271 SH2D1AO60880 128 aa5.58□□□□□ -1.52
CLIP1-205ENST00000514271 LINC00315P59091 139 aa5.58□□□□□ -1.52
CLIP1-205ENST00000514271 ORMDL3Q8N138 153 aa5.58□□□□□ -1.52
CLIP1-205ENST00000514271 C1QTNF4Q9BXJ3 329 aa5.58□□□□□ -1.52
CLIP1-205ENST00000514271 ZFAND3Q9H8U3 227 aa5.58□□□□□ -1.52
CLIP1-205ENST00000514271 ITPR3Q14573 2671 aa5.58□□□□□ -1.52
CLIP1-205ENST00000514271 MYO9AB2RTY4 2548 aa5.58□□□□□ -1.52
CLIP1-205ENST00000514271 USP17L23D6RBM5 183 aa5.58□□□□□ -1.52
CLIP1-205ENST00000514271 TIMM23O14925 209 aa5.58□□□□□ -1.52
CLIP1-205ENST00000514271 FOXI1Q12951 378 aa5.58□□□□□ -1.52
CLIP1-205ENST00000514271 RIGQ13278 110 aa5.58□□□□□ -1.52
CLIP1-205ENST00000514271 C4orf26Q17RF5 130 aa5.58□□□□□ -1.52
CLIP1-205ENST00000514271 FA2HQ7L5A8 372 aa5.58□□□□□ -1.52
CLIP1-205ENST00000514271 RASL11BQ9BPW5 248 aa5.58□□□□□ -1.52
CLIP1-205ENST00000514271 FBXL15Q9H469 300 aa5.58□□□□□ -1.52
CLIP1-205ENST00000514271 KIF25-AS1Q9Y6Z4 181 aa5.58□□□□□ -1.52
CLIP1-205ENST00000514271 TACC2O95359 2948 aa5.57□□□□□ -1.52
CLIP1-205ENST00000514271 CELSR2Q9HCU4 2923 aa5.57□□□□□ -1.52
CLIP1-205ENST00000514271 IGKV3D-20A0A0C4DH25 116 aa5.57□□□□□ -1.52
CLIP1-205ENST00000514271 SLC25A5P05141 298 aaKnown RBP5.57□□□□□ -1.52
CLIP1-205ENST00000514271 CSN1S1P47710 185 aa5.57□□□□□ -1.52
CLIP1-205ENST00000514271 K7EMI3 77 aa5.57□□□□□ -1.52
CLIP1-205ENST00000514271 K7ERJ3 54 aa5.57□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms