RNA–Protein interactions for RNA: ENST00000513895.1

LINC00616-204, long intergenic non-protein coding RNA 616, humanhuman

TSL 3

Gene LINC00616, Length 566 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00616-204ENST00000513895 SAPCD1Q5SSQ6 148 aa4.32□□□□□ -1.72
LINC00616-204ENST00000513895 COMMD7Q86VX2 200 aa4.32□□□□□ -1.72
LINC00616-204ENST00000513895 EXOC3-AS1Q8N2X6 119 aa4.32□□□□□ -1.72
LINC00616-204ENST00000513895 RNF182Q8N6D2 247 aa4.32□□□□□ -1.72
LINC00616-204ENST00000513895 C9orf85Q96MD7 179 aa4.32□□□□□ -1.72
LINC00616-204ENST00000513895 NKX6-2Q9C056 277 aaPredicted RBP4.32□□□□□ -1.72
LINC00616-204ENST00000513895 Q9H3A6 140 aa4.32□□□□□ -1.72
LINC00616-204ENST00000513895 MANBALQ9NQG1 85 aa4.32□□□□□ -1.72
LINC00616-204ENST00000513895 OTORQ9NRC9 128 aa4.32□□□□□ -1.72
LINC00616-204ENST00000513895 A8MTW9 85 aa4.31□□□□□ -1.72
LINC00616-204ENST00000513895 M0R3E3 92 aa4.31□□□□□ -1.72
LINC00616-204ENST00000513895 TAS2R60P59551 318 aa4.31□□□□□ -1.72
LINC00616-204ENST00000513895 DEFB131AP59861 70 aa4.31□□□□□ -1.72
LINC00616-204ENST00000513895 DEFB1P60022 68 aa4.31□□□□□ -1.72
LINC00616-204ENST00000513895 UBE2G2P60604 165 aa4.31□□□□□ -1.72
LINC00616-204ENST00000513895 SNRPD3P62318 126 aaKnown RBP4.31□□□□□ -1.72
LINC00616-204ENST00000513895 PSMG4Q5JS54 123 aa4.31□□□□□ -1.72
LINC00616-204ENST00000513895 RXFP4Q8TDU9 374 aa4.31□□□□□ -1.72
LINC00616-204ENST00000513895 LINC00052Q96N35 136 aa4.31□□□□□ -1.72
LINC00616-204ENST00000513895 TXNDC17Q9BRA2 123 aa4.31□□□□□ -1.72
LINC00616-204ENST00000513895 SAV1Q9H4B6 383 aaPredicted RBP4.31□□□□□ -1.72
LINC00616-204ENST00000513895 GNG13Q9P2W3 67 aa4.31□□□□□ -1.72
LINC00616-204ENST00000513895 EPDR1Q9UM22 224 aa4.31□□□□□ -1.72
LINC00616-204ENST00000513895 PLECQ15149 4684 aaKnown RBP4.31□□□□□ -1.72
LINC00616-204ENST00000513895 COL7A1Q02388 2944 aa4.3□□□□□ -1.72
LINC00616-204ENST00000513895 NBEAL2Q6ZNJ1 2754 aa4.3□□□□□ -1.72
LINC00616-204ENST00000513895 IGHV3OR16-12A0A075B7B8 117 aa4.3□□□□□ -1.72
LINC00616-204ENST00000513895 A0A0J9YX75 114 aa4.3□□□□□ -1.72
LINC00616-204ENST00000513895 A0A1B0GW15 77 aa4.3□□□□□ -1.72
LINC00616-204ENST00000513895 FAM231BA6NCW3 169 aa4.3□□□□□ -1.72
LINC00616-204ENST00000513895 RBFOX3A6NFN3 312 aa4.3□□□□□ -1.72
LINC00616-204ENST00000513895 OR11H12B2RN74 326 aa4.3□□□□□ -1.72
LINC00616-204ENST00000513895 F6UB75 175 aa4.3□□□□□ -1.72
LINC00616-204ENST00000513895 IFNA1P01562 189 aa4.3□□□□□ -1.72
LINC00616-204ENST00000513895 TCRAP04437 139 aa4.3□□□□□ -1.72
LINC00616-204ENST00000513895 RBMY1CP0DJD4 496 aa4.3□□□□□ -1.72
LINC00616-204ENST00000513895 BCL2P10415 239 aa4.3□□□□□ -1.72
LINC00616-204ENST00000513895 ATP5G3P48201 142 aa4.3□□□□□ -1.72
LINC00616-204ENST00000513895 HNRNPA3P51991 378 aaKnown RBP4.3□□□□□ -1.72
LINC00616-204ENST00000513895 ZNF506Q5JVG8 444 aa4.3□□□□□ -1.72
LINC00616-204ENST00000513895 GDF5OSQ5U4N7 250 aa4.3□□□□□ -1.72
LINC00616-204ENST00000513895 LINC00322Q6ZN03 302 aaPredicted RBP4.3□□□□□ -1.72
LINC00616-204ENST00000513895 FOXI2Q6ZQN5 318 aa4.3□□□□□ -1.72
LINC00616-204ENST00000513895 GTSCR1Q86UQ5 136 aa4.3□□□□□ -1.72
LINC00616-204ENST00000513895 DEFB125Q8N687 156 aa4.3□□□□□ -1.72
LINC00616-204ENST00000513895 C5orf17Q8NAS9 161 aa4.3□□□□□ -1.72
LINC00616-204ENST00000513895 ZNF738Q8NE65 137 aa4.3□□□□□ -1.72
LINC00616-204ENST00000513895 OR8A1Q8NGG7 326 aa4.3□□□□□ -1.72
LINC00616-204ENST00000513895 RPUSD4Q96CM3 377 aaKnown RBP4.3□□□□□ -1.72
LINC00616-204ENST00000513895 RARRES2Q99969 163 aa4.3□□□□□ -1.72
LINC00616-204ENST00000513895 MAP1LC3CQ9BXW4 147 aa4.3□□□□□ -1.72
LINC00616-204ENST00000513895 WFDC10AQ9H1F0 79 aa4.3□□□□□ -1.72
LINC00616-204ENST00000513895 VAX2Q9UIW0 290 aa4.3□□□□□ -1.72
LINC00616-204ENST00000513895 TRBV6-1A0A0K0K1D8 114 aa4.29□□□□□ -1.72
LINC00616-204ENST00000513895 RBAKDNA6NC62 111 aa4.29□□□□□ -1.72
LINC00616-204ENST00000513895 KNCNA6PVL3 124 aa4.29□□□□□ -1.72
LINC00616-204ENST00000513895 C11orf94C9JXX5 98 aa4.29□□□□□ -1.72
LINC00616-204ENST00000513895 H3BMM0 161 aa4.29□□□□□ -1.72
LINC00616-204ENST00000513895 IGLV2-11P01706 119 aa4.29□□□□□ -1.72
LINC00616-204ENST00000513895 SLC25A5P05141 298 aaKnown RBP4.29□□□□□ -1.72
LINC00616-204ENST00000513895 ZNF705DP0CH99 300 aaPredicted RBP4.29□□□□□ -1.72
LINC00616-204ENST00000513895 ZNF705BP0CI00 300 aaPredicted RBP4.29□□□□□ -1.72
LINC00616-204ENST00000513895 PRB4P10163 310 aaPredicted RBP4.29□□□□□ -1.72
LINC00616-204ENST00000513895 HLA-DRB4P13762 266 aa4.29□□□□□ -1.72
LINC00616-204ENST00000513895 GNG5P63218 68 aa4.29□□□□□ -1.72
LINC00616-204ENST00000513895 MEF2BQ02080 365 aaPredicted RBP4.29□□□□□ -1.72
LINC00616-204ENST00000513895 BTN1A1Q13410 526 aa4.29□□□□□ -1.72
LINC00616-204ENST00000513895 HIST1H2BAQ96A08 127 aa4.29□□□□□ -1.72
LINC00616-204ENST00000513895 FAM19A4Q96LR4 140 aa4.29□□□□□ -1.72
LINC00616-204ENST00000513895 LINC00477Q96M19 166 aa4.29□□□□□ -1.72
LINC00616-204ENST00000513895 C2orf88Q9BSF0 95 aa4.29□□□□□ -1.72
LINC00616-204ENST00000513895 AGPAT4-IT1Q9H0P7 198 aa4.29□□□□□ -1.72
LINC00616-204ENST00000513895 KLF12Q9Y4X4 402 aa4.29□□□□□ -1.72
LINC00616-204ENST00000513895 HLA-DRB4X5D2U9 266 aa4.29□□□□□ -1.72
LINC00616-204ENST00000513895 AGRNO00468 2067 aa4.29□□□□□ -1.72
LINC00616-204ENST00000513895 IGKV2-40A0A087WW87 121 aaPredicted RBP4.28□□□□□ -1.72
LINC00616-204ENST00000513895 A0A1B0GWB2 263 aa4.28□□□□□ -1.72
LINC00616-204ENST00000513895 RBMY1BA6NDE4 496 aaKnown RBP4.28□□□□□ -1.72
LINC00616-204ENST00000513895 RBMY1EA6NEQ0 496 aaKnown RBP4.28□□□□□ -1.72
LINC00616-204ENST00000513895 C9JQL5 133 aa4.28□□□□□ -1.72
LINC00616-204ENST00000513895 K7EIL1 84 aa4.28□□□□□ -1.72
LINC00616-204ENST00000513895 PEX7O00628 323 aa4.28□□□□□ -1.72
LINC00616-204ENST00000513895 PDE6DO43924 150 aa4.28□□□□□ -1.72
LINC00616-204ENST00000513895 DUSP14O95147 198 aaKnown RBP4.28□□□□□ -1.72
LINC00616-204ENST00000513895 IGKV2D-40P01614 121 aaPredicted RBP4.28□□□□□ -1.72
LINC00616-204ENST00000513895 SRP19P09132 144 aaKnown RBP4.28□□□□□ -1.72
LINC00616-204ENST00000513895 RBMY1DP0C7P1 496 aaKnown RBP4.28□□□□□ -1.72
LINC00616-204ENST00000513895 CT45A10P0DMU9 189 aa4.28□□□□□ -1.72
LINC00616-204ENST00000513895 CSN1S1P47710 185 aa4.28□□□□□ -1.72
LINC00616-204ENST00000513895 AKR1D1P51857 326 aa4.28□□□□□ -1.72
LINC00616-204ENST00000513895 DEFA6Q01524 100 aa4.28□□□□□ -1.72
LINC00616-204ENST00000513895 ERCC8Q13216 396 aa4.28□□□□□ -1.72
LINC00616-204ENST00000513895 ACTL10Q5JWF8 245 aa4.28□□□□□ -1.72
LINC00616-204ENST00000513895 EBLN2Q6P2I7 272 aa4.28□□□□□ -1.72
LINC00616-204ENST00000513895 AMTNQ6UX39 209 aa4.28□□□□□ -1.72
LINC00616-204ENST00000513895 GOLT1AQ6ZVE7 132 aa4.28□□□□□ -1.72
LINC00616-204ENST00000513895 MRPL52Q86TS9 123 aaKnown RBP4.28□□□□□ -1.72
LINC00616-204ENST00000513895 CYB561D1Q8N8Q1 229 aa4.28□□□□□ -1.72
LINC00616-204ENST00000513895 TMEM75Q8N9X5 138 aa4.28□□□□□ -1.72
LINC00616-204ENST00000513895 OR10J6PQ8NGY7 276 aa4.28□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms