RNA–Protein interactions for RNA: ENST00000513525.1

CCL28-203, Transcript of C-C motif chemokine ligand 28, humanhuman

TSL 1 (best) BASIC

Gene CCL28, Length 1,518 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL28-203ENST00000513525 FAM162BQ5T6X4 162 aa7.19□□□□□ -1.26
CCL28-203ENST00000513525 CDPF1Q6NVV7 123 aa7.19□□□□□ -1.26
CCL28-203ENST00000513525 OR10D4PQ8NGN7 298 aa7.19□□□□□ -1.26
CCL28-203ENST00000513525 TMEM18Q96B42 140 aa7.19□□□□□ -1.26
CCL28-203ENST00000513525 PACRGQ96M98 296 aaPredicted RBP7.19□□□□□ -1.26
CCL28-203ENST00000513525 BIRC6Q9NR09 4857 aa7.19□□□□□ -1.26
CCL28-203ENST00000513525 TRAV8-2A0A0B4J237 113 aa7.18□□□□□ -1.26
CCL28-203ENST00000513525 IGHV3-66A0A0C4DH42 116 aa7.18□□□□□ -1.26
CCL28-203ENST00000513525 K7EQG2 157 aa7.18□□□□□ -1.26
CCL28-203ENST00000513525 SPINK4O60575 86 aa7.18□□□□□ -1.26
CCL28-203ENST00000513525 AMBPP02760 352 aa7.18□□□□□ -1.26
CCL28-203ENST00000513525 CRIP1P50238 77 aa7.18□□□□□ -1.26
CCL28-203ENST00000513525 DEFB131AP59861 70 aa7.18□□□□□ -1.26
CCL28-203ENST00000513525 RPS20P60866 119 aaKnown RBP7.18□□□□□ -1.26
CCL28-203ENST00000513525 PDZD11Q5EBL8 140 aa7.18□□□□□ -1.26
CCL28-203ENST00000513525 SAMD13Q5VXD3 122 aa7.18□□□□□ -1.26
CCL28-203ENST00000513525 CEMP1Q6PRD7 247 aaPredicted RBP7.18□□□□□ -1.26
CCL28-203ENST00000513525 GTSF1Q8WW33 167 aa7.18□□□□□ -1.26
CCL28-203ENST00000513525 C11orf68Q9H3H3 251 aaKnown RBP7.18□□□□□ -1.26
CCL28-203ENST00000513525 PPP1R14DQ9NXH3 145 aa7.18□□□□□ -1.26
CCL28-203ENST00000513525 FRAS1Q86XX4 4008 aa7.17□□□□□ -1.26
CCL28-203ENST00000513525 RPL11P62913 178 aaKnown RBP7.17□□□□□ -1.26
CCL28-203ENST00000513525 S100A12P80511 92 aa7.17□□□□□ -1.26
CCL28-203ENST00000513525 DCANP1Q8TF63 244 aa7.17□□□□□ -1.26
CCL28-203ENST00000513525 VGLL1Q99990 258 aa7.17□□□□□ -1.26
CCL28-203ENST00000513525 KLK5Q9Y337 293 aaPredicted RBP7.17□□□□□ -1.26
CCL28-203ENST00000513525 TMEM189A5PLL7 270 aa7.17□□□□□ -1.26
CCL28-203ENST00000513525 ZNF705FA8MVS1 300 aaPredicted RBP7.17□□□□□ -1.26
CCL28-203ENST00000513525 SH2D1AO60880 128 aa7.17□□□□□ -1.26
CCL28-203ENST00000513525 HLA-DMBP28068 263 aa7.17□□□□□ -1.26
CCL28-203ENST00000513525 RIGQ13278 110 aa7.17□□□□□ -1.26
CCL28-203ENST00000513525 C9orf47Q6ZRZ4 202 aa7.17□□□□□ -1.26
CCL28-203ENST00000513525 TRPT1Q86TN4 253 aaKnown RBP7.17□□□□□ -1.26
CCL28-203ENST00000513525 BAGE3Q86Y29 109 aa7.17□□□□□ -1.26
CCL28-203ENST00000513525 STHQ8IWL8 128 aa7.17□□□□□ -1.26
CCL28-203ENST00000513525 GATD1Q8NB37 220 aa7.17□□□□□ -1.26
CCL28-203ENST00000513525 OR11H2Q8NH07 326 aa7.17□□□□□ -1.26
CCL28-203ENST00000513525 PGLYRP4Q96LB8 373 aa7.17□□□□□ -1.26
CCL28-203ENST00000513525 C16orf92Q96LL3 132 aa7.17□□□□□ -1.26
CCL28-203ENST00000513525 C8orf49Q96NF6 230 aa7.17□□□□□ -1.26
CCL28-203ENST00000513525 LENEPQ9Y5L5 61 aa7.17□□□□□ -1.26
CCL28-203ENST00000513525 A0A1B0GUT8 65 aa7.16□□□□□ -1.26
CCL28-203ENST00000513525 ZNF138P52744 262 aa7.16□□□□□ -1.26
CCL28-203ENST00000513525 PYY3Q5JQD4 70 aa7.16□□□□□ -1.26
CCL28-203ENST00000513525 GDF5OSQ5U4N7 250 aa7.16□□□□□ -1.26
CCL28-203ENST00000513525 IGFL4Q6B9Z1 124 aa7.16□□□□□ -1.26
CCL28-203ENST00000513525 MORN3Q6PF18 240 aaPredicted RBP7.16□□□□□ -1.26
CCL28-203ENST00000513525 PHLDA1Q8WV24 401 aaPredicted RBP7.16□□□□□ -1.26
CCL28-203ENST00000513525 BORCS7Q96B45 105 aa7.16□□□□□ -1.26
CCL28-203ENST00000513525 NIT2Q9NQR4 276 aa7.16□□□□□ -1.26
CCL28-203ENST00000513525 GRIFINA4D1Z8 144 aa7.15□□□□□ -1.27
CCL28-203ENST00000513525 FABP5P3A8MUU1 101 aa7.15□□□□□ -1.27
CCL28-203ENST00000513525 PRAC2D3DTV9 90 aa7.15□□□□□ -1.27
CCL28-203ENST00000513525 SOCS3O14543 225 aa7.15□□□□□ -1.27
CCL28-203ENST00000513525 SRIP30626 198 aa7.15□□□□□ -1.27
CCL28-203ENST00000513525 CAMPP49913 170 aa7.15□□□□□ -1.27
CCL28-203ENST00000513525 SLAQ13239 276 aa7.15□□□□□ -1.27
CCL28-203ENST00000513525 JOSD1Q15040 202 aaPredicted RBP7.15□□□□□ -1.27
CCL28-203ENST00000513525 TMEM78Q5T7P6 136 aa7.15□□□□□ -1.27
CCL28-203ENST00000513525 TMEM256Q8N2U0 113 aa7.15□□□□□ -1.27
CCL28-203ENST00000513525 RNF182Q8N6D2 247 aa7.15□□□□□ -1.27
CCL28-203ENST00000513525 Q8TAT8 98 aa7.15□□□□□ -1.27
CCL28-203ENST00000513525 KRTAP17-1Q9BYP8 105 aa7.15□□□□□ -1.27
CCL28-203ENST00000513525 NRN1Q9NPD7 142 aa7.15□□□□□ -1.27
CCL28-203ENST00000513525 TP53TG3Q9ULZ0 132 aa7.15□□□□□ -1.27
CCL28-203ENST00000513525 SERF1AO75920 110 aa7.14□□□□□ -1.27
CCL28-203ENST00000513525 LY6G6CO95867 125 aa7.14□□□□□ -1.27
CCL28-203ENST00000513525 GIG44P09565 113 aaPredicted RBP7.14□□□□□ -1.27
CCL28-203ENST00000513525 ZNF688P0C7X2 276 aa7.14□□□□□ -1.27
CCL28-203ENST00000513525 GZMBP10144 247 aa7.14□□□□□ -1.27
CCL28-203ENST00000513525 LINC00310P59036 64 aa7.14□□□□□ -1.27
CCL28-203ENST00000513525 HIST1H1AQ02539 215 aaPredicted RBP7.14□□□□□ -1.27
CCL28-203ENST00000513525 Q8NAQ8 132 aa7.14□□□□□ -1.27
CCL28-203ENST00000513525 C11orf45Q8TAV5 145 aa7.14□□□□□ -1.27
CCL28-203ENST00000513525 LINC00477Q96M19 166 aa7.14□□□□□ -1.27
CCL28-203ENST00000513525 AGPAT4-IT1Q9H0P7 198 aa7.14□□□□□ -1.27
CCL28-203ENST00000513525 TRBV7-9A0A0J9YWB2 115 aa7.13□□□□□ -1.27
CCL28-203ENST00000513525 CTRLP40313 264 aa7.13□□□□□ -1.27
CCL28-203ENST00000513525 ERCC8Q13216 396 aa7.13□□□□□ -1.27
CCL28-203ENST00000513525 KIAA1644Q3SXP7 199 aa7.13□□□□□ -1.27
CCL28-203ENST00000513525 ZNF738Q8NE65 137 aa7.13□□□□□ -1.27
CCL28-203ENST00000513525 ALKBH7Q9BT30 221 aaPredicted RBP7.13□□□□□ -1.27
CCL28-203ENST00000513525 DNAH6Q9C0G6 4158 aa7.13□□□□□ -1.27
CCL28-203ENST00000513525 VPS13DQ5THJ4 4388 aa7.13□□□□□ -1.27
CCL28-203ENST00000513525 KNCNA6PVL3 124 aa7.12□□□□□ -1.27
CCL28-203ENST00000513525 NUPR1O60356 82 aa7.12□□□□□ -1.27
CCL28-203ENST00000513525 ARMS2P0C7Q2 107 aa7.12□□□□□ -1.27
CCL28-203ENST00000513525 MIFP14174 115 aa7.12□□□□□ -1.27
CCL28-203ENST00000513525 ID1P41134 155 aa7.12□□□□□ -1.27
CCL28-203ENST00000513525 ZNF80P51504 273 aaPredicted RBP7.12□□□□□ -1.27
CCL28-203ENST00000513525 NANOS2P60321 138 aaKnown RBP7.12□□□□□ -1.27
CCL28-203ENST00000513525 LGALS9CQ6DKI2 356 aa7.12□□□□□ -1.27
CCL28-203ENST00000513525 ZNF493Q6ZR52 646 aa7.12□□□□□ -1.27
CCL28-203ENST00000513525 CSNK1G2-AS1Q8NCQ2 148 aa7.12□□□□□ -1.27
CCL28-203ENST00000513525 OR10J6PQ8NGY7 276 aa7.12□□□□□ -1.27
CCL28-203ENST00000513525 C18orf32Q8TCD1 76 aa7.12□□□□□ -1.27
CCL28-203ENST00000513525 KCNS1Q96KK3 526 aa7.12□□□□□ -1.27
CCL28-203ENST00000513525 IGLC6P0CF74 106 aa7.11□□□□□ -1.27
CCL28-203ENST00000513525 TCTAP57738 103 aa7.11□□□□□ -1.27
CCL28-203ENST00000513525 SNRPD3P62318 126 aaKnown RBP7.11□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms