RNA–Protein interactions for RNA: ENST00000512726.1

RFC1-214, Transcript of replication factor C subunit 1, humanhuman

TSL 2

Gene RFC1, Length 752 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-214ENST00000512726 HIGD1CA8MV81 97 aa2.39□□□□□ -2.03
RFC1-214ENST00000512726 PRB4P10163 310 aaPredicted RBP2.39□□□□□ -2.03
RFC1-214ENST00000512726 Q6ZUT4 128 aa2.39□□□□□ -2.03
RFC1-214ENST00000512726 VSTM2AQ8TAG5 236 aa2.39□□□□□ -2.03
RFC1-214ENST00000512726 CCDC167Q9P0B6 97 aa2.39□□□□□ -2.03
RFC1-214ENST00000512726 SPAG17Q6Q759 2223 aa2.39□□□□□ -2.03
RFC1-214ENST00000512726 GRIN2AQ12879 1464 aa2.39□□□□□ -2.03
RFC1-214ENST00000512726 KIF13AQ9H1H9 1805 aa2.38□□□□□ -2.03
RFC1-214ENST00000512726 MYOM3Q5VTT5 1437 aa2.38□□□□□ -2.03
RFC1-214ENST00000512726 SDF2Q99470 211 aa2.38□□□□□ -2.03
RFC1-214ENST00000512726 ADGRB1O14514 1584 aa2.37□□□□□ -2.03
RFC1-214ENST00000512726 EMX2Q04743 252 aa2.37□□□□□ -2.03
RFC1-214ENST00000512726 KRTAP5-7Q6L8G8 165 aa2.37□□□□□ -2.03
RFC1-214ENST00000512726 RPL13AP3Q6NVV1 102 aa2.37□□□□□ -2.03
RFC1-214ENST00000512726 Q6ZQY7 126 aa2.37□□□□□ -2.03
RFC1-214ENST00000512726 KCNRGQ8N5I3 272 aa2.37□□□□□ -2.03
RFC1-214ENST00000512726 OTOGLQ3ZCN5 2332 aa2.36□□□□□ -2.03
RFC1-214ENST00000512726 MYH9P35579 1960 aaKnown RBP2.36□□□□□ -2.03
RFC1-214ENST00000512726 CITO14578 2027 aa2.36□□□□□ -2.03
RFC1-214ENST00000512726 FAM25AB3EWG3 89 aa2.36□□□□□ -2.03
RFC1-214ENST00000512726 FAM25CB3EWG5 89 aa2.36□□□□□ -2.03
RFC1-214ENST00000512726 FAM25GB3EWG6 89 aa2.36□□□□□ -2.03
RFC1-214ENST00000512726 CCDC179H3BU77 68 aa2.36□□□□□ -2.03
RFC1-214ENST00000512726 GNG7O60262 68 aa2.36□□□□□ -2.03
RFC1-214ENST00000512726 TMEM2Q9UHN6 1383 aa2.36□□□□□ -2.03
RFC1-214ENST00000512726 CXorf51AA0A1B0GTR3 108 aa2.35□□□□□ -2.03
RFC1-214ENST00000512726 LINC01545Q5VT33 79 aa2.35□□□□□ -2.03
RFC1-214ENST00000512726 XAF1Q6GPH4 301 aa2.35□□□□□ -2.03
RFC1-214ENST00000512726 IBTKQ9P2D0 1353 aaPredicted RBP2.35□□□□□ -2.03
RFC1-214ENST00000512726 MYH7P12883 1935 aa2.34□□□□□ -2.03
RFC1-214ENST00000512726 CDK12Q9NYV4 1490 aaPredicted RBP2.34□□□□□ -2.03
RFC1-214ENST00000512726 PITX3O75364 302 aa2.34□□□□□ -2.03
RFC1-214ENST00000512726 CCKP06307 115 aa2.34□□□□□ -2.03
RFC1-214ENST00000512726 SLC25A6P12236 298 aa2.34□□□□□ -2.03
RFC1-214ENST00000512726 SPCS2Q15005 226 aa2.34□□□□□ -2.03
RFC1-214ENST00000512726 APOC1P02654 83 aa2.33□□□□□ -2.04
RFC1-214ENST00000512726 DEFB132Q7Z7B7 95 aa2.33□□□□□ -2.04
RFC1-214ENST00000512726 LOC101927531A0A1B0GV80 90 aa2.32□□□□□ -2.04
RFC1-214ENST00000512726 FAM92AA1XBS5 289 aa2.32□□□□□ -2.04
RFC1-214ENST00000512726 KRTAP10-4P60372 401 aaPredicted RBP2.32□□□□□ -2.04
RFC1-214ENST00000512726 Q86TA4 180 aa2.32□□□□□ -2.04
RFC1-214ENST00000512726 CCL19Q99731 98 aa2.32□□□□□ -2.04
RFC1-214ENST00000512726 CNTRLQ7Z7A1 2325 aa2.32□□□□□ -2.04
RFC1-214ENST00000512726 AKAP11Q9UKA4 1901 aa2.32□□□□□ -2.04
RFC1-214ENST00000512726 TRBV30A0A0K0K1B3 111 aa2.31□□□□□ -2.04
RFC1-214ENST00000512726 SPANXN1Q5VSR9 72 aa2.31□□□□□ -2.04
RFC1-214ENST00000512726 NDUFA11Q86Y39 141 aa2.31□□□□□ -2.04
RFC1-214ENST00000512726 TRAV12-2A0A075B6T6 113 aa2.3□□□□□ -2.04
RFC1-214ENST00000512726 TFF1P04155 84 aa2.3□□□□□ -2.04
RFC1-214ENST00000512726 FXYD3Q14802 87 aa2.3□□□□□ -2.04
RFC1-214ENST00000512726 DPH3Q96FX2 82 aa2.3□□□□□ -2.04
RFC1-214ENST00000512726 NDUFA12Q9UI09 145 aa2.3□□□□□ -2.04
RFC1-214ENST00000512726 PHLPP1O60346 1717 aa2.3□□□□□ -2.04
RFC1-214ENST00000512726 DLEC1Q9Y238 1755 aa2.3□□□□□ -2.04
RFC1-214ENST00000512726 TRIOBPQ9H2D6 2365 aa2.3□□□□□ -2.04
RFC1-214ENST00000512726 NBDYA0A0U1RRE5 68 aa2.29□□□□□ -2.04
RFC1-214ENST00000512726 PIRTP0C851 137 aa2.29□□□□□ -2.04
RFC1-214ENST00000512726 CAV3P56539 151 aa2.29□□□□□ -2.04
RFC1-214ENST00000512726 Q6ZS92 163 aa2.29□□□□□ -2.04
RFC1-214ENST00000512726 OR2T2Q6IF00 324 aa2.28□□□□□ -2.04
RFC1-214ENST00000512726 COPS9Q8WXC6 57 aa2.28□□□□□ -2.04
RFC1-214ENST00000512726 AFDNP55196 1824 aaKnown RBP2.28□□□□□ -2.04
RFC1-214ENST00000512726 SPEF2Q9C093 1822 aa2.28□□□□□ -2.04
RFC1-214ENST00000512726 FOCADQ5VW36 1801 aa2.27□□□□□ -2.05
RFC1-214ENST00000512726 IL5P05113 134 aa2.27□□□□□ -2.05
RFC1-214ENST00000512726 PDCD10Q9BUL8 212 aa2.27□□□□□ -2.05
RFC1-214ENST00000512726 TMEM242Q9NWH2 141 aa2.27□□□□□ -2.05
RFC1-214ENST00000512726 TEX49A0A1B0GTD5 131 aa2.26□□□□□ -2.05
RFC1-214ENST00000512726 PIPP12273 146 aaPredicted RBP2.26□□□□□ -2.05
RFC1-214ENST00000512726 C5orf56Q8N8D9 126 aa2.26□□□□□ -2.05
RFC1-214ENST00000512726 SPTSSAQ969W0 71 aa2.26□□□□□ -2.05
RFC1-214ENST00000512726 RREB1Q92766 1687 aa2.25□□□□□ -2.05
RFC1-214ENST00000512726 KIAA0100Q14667 2235 aaKnown RBP2.25□□□□□ -2.05
RFC1-214ENST00000512726 A0A1W2PPM0 123 aa2.25□□□□□ -2.05
RFC1-214ENST00000512726 LINC00208Q96KT6 92 aa2.25□□□□□ -2.05
RFC1-214ENST00000512726 PTPRMP28827 1452 aa2.25□□□□□ -2.05
RFC1-214ENST00000512726 APODP05090 189 aa2.24□□□□□ -2.05
RFC1-214ENST00000512726 Q8N6K4 173 aa2.24□□□□□ -2.05
RFC1-214ENST00000512726 IFI27L1Q96BM0 104 aa2.24□□□□□ -2.05
RFC1-214ENST00000512726 TMEM141Q96I45 108 aa2.24□□□□□ -2.05
RFC1-214ENST00000512726 NAIPQ13075 1403 aa2.24□□□□□ -2.05
RFC1-214ENST00000512726 ROCK2O75116 1388 aaKnown RBP2.23□□□□□ -2.05
RFC1-214ENST00000512726 ZDBF2Q9HCK1 2354 aa2.23□□□□□ -2.05
RFC1-214ENST00000512726 A0A1B0GV90 55 aa2.23□□□□□ -2.05
RFC1-214ENST00000512726 RPL7L1Q6DKI1 246 aaKnown RBP2.23□□□□□ -2.05
RFC1-214ENST00000512726 SLC48A1Q6P1K1 146 aa2.23□□□□□ -2.05
RFC1-214ENST00000512726 SNRNP25Q9BV90 132 aaKnown RBP2.23□□□□□ -2.05
RFC1-214ENST00000512726 LAMA4Q16363 1823 aa2.23□□□□□ -2.05
RFC1-214ENST00000512726 ABCA4P78363 2273 aa2.22□□□□□ -2.05
RFC1-214ENST00000512726 ZNF142P52746 1687 aaPredicted RBP2.22□□□□□ -2.05
RFC1-214ENST00000512726 TCRBV3S1A0A5B6 114 aa2.22□□□□□ -2.05
RFC1-214ENST00000512726 A6NIN4 97 aa2.22□□□□□ -2.05
RFC1-214ENST00000512726 SNCGO76070 127 aa2.22□□□□□ -2.05
RFC1-214ENST00000512726 NDUFB6O95139 128 aa2.22□□□□□ -2.05
RFC1-214ENST00000512726 MEIG1Q5JSS6 88 aa2.22□□□□□ -2.05
RFC1-214ENST00000512726 TSKUQ8WUA8 353 aa2.22□□□□□ -2.05
RFC1-214ENST00000512726 FXYD1O00168 92 aa2.21□□□□□ -2.06
RFC1-214ENST00000512726 DLEU1O43261 78 aa2.21□□□□□ -2.06
RFC1-214ENST00000512726 BLMP54132 1417 aaPredicted RBP2.21□□□□□ -2.06
RFC1-214ENST00000512726 CYP2G1PQ6ZSU1 146 aa2.21□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 464.1 ms