RNA–Protein interactions for RNA: ENST00000512332.5

CPNE4-210, Transcript of copine 4, humanhuman

TSL 1 (best) BASIC

Gene CPNE4, Length 2,230 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-210ENST00000512332 GTF2H5Q6ZYL4 71 aa6.92□□□□□ -1.3
CPNE4-210ENST00000512332 GTSCR1Q86UQ5 136 aa6.92□□□□□ -1.3
CPNE4-210ENST00000512332 NEXN-AS1Q8NBZ9 246 aa6.92□□□□□ -1.3
CPNE4-210ENST00000512332 RNASE8Q8TDE3 154 aaKnown RBP6.92□□□□□ -1.3
CPNE4-210ENST00000512332 SCGB3A1Q96QR1 104 aa6.92□□□□□ -1.3
CPNE4-210ENST00000512332 TM2D2Q9BX73 214 aa6.92□□□□□ -1.3
CPNE4-210ENST00000512332 PIEZO1Q92508 2521 aa6.92□□□□□ -1.3
CPNE4-210ENST00000512332 LGALS9O00182 355 aa6.92□□□□□ -1.3
CPNE4-210ENST00000512332 TCTAP57738 103 aa6.92□□□□□ -1.3
CPNE4-210ENST00000512332 UFSP1Q6NVU6 142 aa6.92□□□□□ -1.3
CPNE4-210ENST00000512332 ERASQ7Z444 233 aa6.92□□□□□ -1.3
CPNE4-210ENST00000512332 IGKV3-7A0A075B6H7 116 aa6.91□□□□□ -1.3
CPNE4-210ENST00000512332 GAGE10A6NGK3 116 aa6.91□□□□□ -1.3
CPNE4-210ENST00000512332 ELANEP08246 267 aa6.91□□□□□ -1.3
CPNE4-210ENST00000512332 RBX1P62877 108 aa6.91□□□□□ -1.3
CPNE4-210ENST00000512332 RNF152Q8N8N0 203 aa6.91□□□□□ -1.3
CPNE4-210ENST00000512332 RPL39LQ96EH5 51 aaKnown RBP6.91□□□□□ -1.3
CPNE4-210ENST00000512332 CHAC1Q9BUX1 264 aa6.91□□□□□ -1.3
CPNE4-210ENST00000512332 CFAP46Q8IYW2 2715 aa6.91□□□□□ -1.3
CPNE4-210ENST00000512332 GAGE12BA1L429 117 aa6.91□□□□□ -1.3
CPNE4-210ENST00000512332 LINC01619G3V211 115 aa6.91□□□□□ -1.3
CPNE4-210ENST00000512332 MGPP08493 103 aa6.91□□□□□ -1.3
CPNE4-210ENST00000512332 SMIM13P0DJ93 91 aa6.91□□□□□ -1.3
CPNE4-210ENST00000512332 SNRPD3P62318 126 aaKnown RBP6.91□□□□□ -1.3
CPNE4-210ENST00000512332 TMEM95Q3KNT9 176 aa6.91□□□□□ -1.3
CPNE4-210ENST00000512332 C2orf66Q6UXQ4 117 aa6.91□□□□□ -1.3
CPNE4-210ENST00000512332 A0A0J9YX75 114 aa6.9□□□□□ -1.3
CPNE4-210ENST00000512332 K7EQG2 157 aa6.9□□□□□ -1.3
CPNE4-210ENST00000512332 FSHBP01225 129 aa6.9□□□□□ -1.3
CPNE4-210ENST00000512332 SRD5A1P18405 259 aa6.9□□□□□ -1.3
CPNE4-210ENST00000512332 CDKN1BP46527 198 aa6.9□□□□□ -1.3
CPNE4-210ENST00000512332 POLR2KP53803 58 aaKnown RBP6.9□□□□□ -1.3
CPNE4-210ENST00000512332 CSTL1Q9H114 145 aa6.9□□□□□ -1.3
CPNE4-210ENST00000512332 CST9LQ9H4G1 147 aa6.9□□□□□ -1.3
CPNE4-210ENST00000512332 VPREB3Q9UKI3 123 aa6.9□□□□□ -1.3
CPNE4-210ENST00000512332 CHTOPQ9Y3Y2 248 aaKnown RBP6.9□□□□□ -1.3
CPNE4-210ENST00000512332 CSPG4Q6UVK1 2322 aa6.89□□□□□ -1.31
CPNE4-210ENST00000512332 H3BUT2 72 aa6.89□□□□□ -1.31
CPNE4-210ENST00000512332 K7EP34 96 aa6.89□□□□□ -1.31
CPNE4-210ENST00000512332 SPRY2O43597 315 aa6.89□□□□□ -1.31
CPNE4-210ENST00000512332 LGALS1P09382 135 aaKnown RBP6.89□□□□□ -1.31
CPNE4-210ENST00000512332 EDN2P20800 178 aa6.89□□□□□ -1.31
CPNE4-210ENST00000512332 CEND1Q8N111 149 aa6.89□□□□□ -1.31
CPNE4-210ENST00000512332 C9orf85Q96MD7 179 aa6.89□□□□□ -1.31
CPNE4-210ENST00000512332 TTTY13Q9BZ97 58 aa6.89□□□□□ -1.31
CPNE4-210ENST00000512332 MUC4Q99102 2169 aa6.89□□□□□ -1.31
CPNE4-210ENST00000512332 USP9XQ93008 2570 aaPredicted RBP6.89□□□□□ -1.31
CPNE4-210ENST00000512332 COL12A1Q99715 3063 aa6.89□□□□□ -1.31
CPNE4-210ENST00000512332 TRBV6-5A0A0K0K1A5 114 aa6.89□□□□□ -1.31
CPNE4-210ENST00000512332 VCYO14598 125 aa6.89□□□□□ -1.31
CPNE4-210ENST00000512332 TGFAP01135 160 aa6.89□□□□□ -1.31
CPNE4-210ENST00000512332 CD7P09564 240 aa6.89□□□□□ -1.31
CPNE4-210ENST00000512332 GCSHP23434 173 aa6.89□□□□□ -1.31
CPNE4-210ENST00000512332 Q6YL49 198 aa6.89□□□□□ -1.31
CPNE4-210ENST00000512332 MAPKAPK5-AS1Q8N8E1 139 aa6.89□□□□□ -1.31
CPNE4-210ENST00000512332 BAALCQ8WXS3 180 aa6.89□□□□□ -1.31
CPNE4-210ENST00000512332 UBE2E2Q96LR5 201 aa6.89□□□□□ -1.31
CPNE4-210ENST00000512332 TRAV12-3A0A0B4J271 114 aa6.88□□□□□ -1.31
CPNE4-210ENST00000512332 IGHV3-16A0A0C4DH30 117 aa6.88□□□□□ -1.31
CPNE4-210ENST00000512332 A0A1W2PPM0 123 aa6.88□□□□□ -1.31
CPNE4-210ENST00000512332 DUSP14O95147 198 aaKnown RBP6.88□□□□□ -1.31
CPNE4-210ENST00000512332 FXYD2P54710 66 aa6.88□□□□□ -1.31
CPNE4-210ENST00000512332 OCIAD2Q56VL3 154 aa6.88□□□□□ -1.31
CPNE4-210ENST00000512332 OR5A1Q8NGJ0 315 aa6.88□□□□□ -1.31
CPNE4-210ENST00000512332 NRGNQ92686 78 aa6.88□□□□□ -1.31
CPNE4-210ENST00000512332 JMJD8Q96S16 334 aa6.88□□□□□ -1.31
CPNE4-210ENST00000512332 CYSLTR1Q9Y271 337 aa6.88□□□□□ -1.31
CPNE4-210ENST00000512332 TRBV27A0A0K0K1C4 114 aa6.88□□□□□ -1.31
CPNE4-210ENST00000512332 PRSS29PA6NIE9 313 aa6.88□□□□□ -1.31
CPNE4-210ENST00000512332 ZNF688P0C7X2 276 aa6.88□□□□□ -1.31
CPNE4-210ENST00000512332 PAPPA-AS1Q5QFB9 102 aa6.88□□□□□ -1.31
CPNE4-210ENST00000512332 C10orf99Q6UWK7 81 aa6.88□□□□□ -1.31
CPNE4-210ENST00000512332 PHLDA1Q8WV24 401 aaPredicted RBP6.88□□□□□ -1.31
CPNE4-210ENST00000512332 CELSR1Q9NYQ6 3014 aa6.87□□□□□ -1.31
CPNE4-210ENST00000512332 IGIPA6NJ69 53 aa6.87□□□□□ -1.31
CPNE4-210ENST00000512332 OR11H12B2RN74 326 aa6.87□□□□□ -1.31
CPNE4-210ENST00000512332 E9PLD3 99 aa6.87□□□□□ -1.31
CPNE4-210ENST00000512332 SUMO4Q6EEV6 95 aa6.87□□□□□ -1.31
CPNE4-210ENST00000512332 SYT8Q8NBV8 401 aa6.87□□□□□ -1.31
CPNE4-210ENST00000512332 OR11H1Q8NG94 326 aa6.87□□□□□ -1.31
CPNE4-210ENST00000512332 OR11H2Q8NH07 326 aa6.87□□□□□ -1.31
CPNE4-210ENST00000512332 TMEM141Q96I45 108 aa6.87□□□□□ -1.31
CPNE4-210ENST00000512332 KIR2DL4Q99706 377 aa6.87□□□□□ -1.31
CPNE4-210ENST00000512332 ZFHX3Q15911 3703 aa6.87□□□□□ -1.31
CPNE4-210ENST00000512332 IGSF10Q6WRI0 2623 aa6.87□□□□□ -1.31
CPNE4-210ENST00000512332 MYMXA0A1B0GTQ4 84 aa6.86□□□□□ -1.31
CPNE4-210ENST00000512332 FABP2P12104 132 aa6.86□□□□□ -1.31
CPNE4-210ENST00000512332 COX6B1P14854 86 aa6.86□□□□□ -1.31
CPNE4-210ENST00000512332 RIPPLY3P57055 190 aa6.86□□□□□ -1.31
CPNE4-210ENST00000512332 SAMD5Q5TGI4 173 aa6.86□□□□□ -1.31
CPNE4-210ENST00000512332 ZFP2Q6ZN57 461 aa6.86□□□□□ -1.31
CPNE4-210ENST00000512332 FOXI2Q6ZQN5 318 aa6.86□□□□□ -1.31
CPNE4-210ENST00000512332 RAB37Q96AX2 223 aa6.86□□□□□ -1.31
CPNE4-210ENST00000512332 TIMM17AQ99595 171 aa6.86□□□□□ -1.31
CPNE4-210ENST00000512332 ZNF702PQ9H963 129 aa6.86□□□□□ -1.31
CPNE4-210ENST00000512332 FLNCQ14315 2725 aa6.86□□□□□ -1.31
CPNE4-210ENST00000512332 IGHV1OR15-1A0A075B7D0 117 aa6.86□□□□□ -1.31
CPNE4-210ENST00000512332 SYNJ2BPP57105 145 aa6.86□□□□□ -1.31
CPNE4-210ENST00000512332 JPT2Q9H910 190 aa6.86□□□□□ -1.31
CPNE4-210ENST00000512332 SELENOKQ9Y6D0 94 aa6.86□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 69 ms