RNA–Protein interactions for RNA: ENST00000512019.1

SMAD1-211, Transcript of SMAD family member 1, humanhuman

TSL 2

Gene SMAD1, Length 847 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-211ENST00000512019 NDUFA5Q16718 116 aa13.95□□□□□ -0.18
SMAD1-211ENST00000512019 SFRP2Q96HF1 295 aa13.95□□□□□ -0.18
SMAD1-211ENST00000512019 C9orf85Q96MD7 179 aa13.95□□□□□ -0.18
SMAD1-211ENST00000512019 IL36BQ9NZH7 164 aa13.95□□□□□ -0.18
SMAD1-211ENST00000512019 H3BVH4 76 aa13.94□□□□□ -0.18
SMAD1-211ENST00000512019 MED14OSP0DP75 135 aa13.94□□□□□ -0.18
SMAD1-211ENST00000512019 LGALS9BQ3B8N2 356 aa13.94□□□□□ -0.18
SMAD1-211ENST00000512019 CT83Q5H943 113 aa13.94□□□□□ -0.18
SMAD1-211ENST00000512019 TRGV1A0A0A0MS02 117 aa13.93□□□□□ -0.18
SMAD1-211ENST00000512019 M0R2P5 195 aa13.93□□□□□ -0.18
SMAD1-211ENST00000512019 SPINK4O60575 86 aa13.93□□□□□ -0.18
SMAD1-211ENST00000512019 DAD1P61803 113 aa13.93□□□□□ -0.18
SMAD1-211ENST00000512019 ARMS2P0C7Q2 107 aa13.92□□□□□ -0.18
SMAD1-211ENST00000512019 DEFB130BP0DP73 79 aa13.92□□□□□ -0.18
SMAD1-211ENST00000512019 DEFB130AP0DP74 79 aa13.92□□□□□ -0.18
SMAD1-211ENST00000512019 ZNF575Q86XF7 245 aa13.92□□□□□ -0.18
SMAD1-211ENST00000512019 OR10G8Q8NGN5 311 aa13.92□□□□□ -0.18
SMAD1-211ENST00000512019 LINC00476Q8WZB0 136 aa13.92□□□□□ -0.18
SMAD1-211ENST00000512019 A8MWL6 223 aa13.91□□□□□ -0.18
SMAD1-211ENST00000512019 Q6ZTI0 123 aa13.91□□□□□ -0.18
SMAD1-211ENST00000512019 LINC00612Q8N6U2 182 aa13.91□□□□□ -0.18
SMAD1-211ENST00000512019 MRPL16Q9NX20 251 aaKnown RBP13.91□□□□□ -0.18
SMAD1-211ENST00000512019 PHLDA3Q9Y5J5 127 aa13.91□□□□□ -0.18
SMAD1-211ENST00000512019 A0A1W2PPQ1 181 aa13.9□□□□□ -0.18
SMAD1-211ENST00000512019 GAGE12BA1L429 117 aa13.9□□□□□ -0.18
SMAD1-211ENST00000512019 GAGE7O76087 117 aa13.9□□□□□ -0.18
SMAD1-211ENST00000512019 OR5AL1P0C617 328 aa13.9□□□□□ -0.18
SMAD1-211ENST00000512019 GAGE12FP0CL80 117 aa13.9□□□□□ -0.18
SMAD1-211ENST00000512019 GAGE12GP0CL81 117 aa13.9□□□□□ -0.18
SMAD1-211ENST00000512019 GAGE12IP0CL82 117 aa13.9□□□□□ -0.18
SMAD1-211ENST00000512019 GZMBP10144 247 aa13.9□□□□□ -0.18
SMAD1-211ENST00000512019 NANOS2P60321 138 aaKnown RBP13.9□□□□□ -0.18
SMAD1-211ENST00000512019 C12orf74Q32Q52 190 aa13.9□□□□□ -0.18
SMAD1-211ENST00000512019 FER1L6-AS1Q8NA97 138 aa13.9□□□□□ -0.18
SMAD1-211ENST00000512019 SYT8Q8NBV8 401 aa13.9□□□□□ -0.18
SMAD1-211ENST00000512019 PTH2Q96A98 100 aa13.9□□□□□ -0.18
SMAD1-211ENST00000512019 NDUFAF3Q9BU61 184 aa13.9□□□□□ -0.18
SMAD1-211ENST00000512019 SCRT2Q9NQ03 307 aa13.9□□□□□ -0.18
SMAD1-211ENST00000512019 CARHSP1Q9Y2V2 147 aaKnown RBP13.9□□□□□ -0.18
SMAD1-211ENST00000512019 TRGV2A0A075B6R0 118 aa13.89□□□□□ -0.19
SMAD1-211ENST00000512019 SNAI2O43623 268 aa13.89□□□□□ -0.19
SMAD1-211ENST00000512019 IGLC6P0CF74 106 aa13.89□□□□□ -0.19
SMAD1-211ENST00000512019 ZNF876PQ49A33 203 aa13.89□□□□□ -0.19
SMAD1-211ENST00000512019 C10orf91Q5T1B1 145 aa13.89□□□□□ -0.19
SMAD1-211ENST00000512019 RASL10AQ92737 203 aa13.89□□□□□ -0.19
SMAD1-211ENST00000512019 TPPP3Q9BW30 176 aa13.89□□□□□ -0.19
SMAD1-211ENST00000512019 SSBP4Q9BWG4 385 aaPredicted RBP13.89□□□□□ -0.19
SMAD1-211ENST00000512019 V9GYV3 84 aa13.89□□□□□ -0.19
SMAD1-211ENST00000512019 FRAS1Q86XX4 4008 aa13.88□□□□□ -0.19
SMAD1-211ENST00000512019 PPP1R2P9O14990 202 aa13.88□□□□□ -0.19
SMAD1-211ENST00000512019 PIK3CD-AS1Q5SR53 167 aa13.88□□□□□ -0.19
SMAD1-211ENST00000512019 SLC7A5P1Q8MH63 180 aa13.88□□□□□ -0.19
SMAD1-211ENST00000512019 ZFP82Q8N141 532 aa13.88□□□□□ -0.19
SMAD1-211ENST00000512019 C18orf15Q96N68 181 aa13.88□□□□□ -0.19
SMAD1-211ENST00000512019 GFRA4Q9GZZ7 299 aa13.88□□□□□ -0.19
SMAD1-211ENST00000512019 F2Z2F3 143 aa13.87□□□□□ -0.19
SMAD1-211ENST00000512019 LY6G6CO95867 125 aa13.87□□□□□ -0.19
SMAD1-211ENST00000512019 MT-ND4LP03901 98 aa13.87□□□□□ -0.19
SMAD1-211ENST00000512019 Q6ZTC4 211 aa13.87□□□□□ -0.19
SMAD1-211ENST00000512019 TSKUQ8WUA8 353 aa13.87□□□□□ -0.19
SMAD1-211ENST00000512019 FAM231BA6NCW3 169 aa13.86□□□□□ -0.19
SMAD1-211ENST00000512019 CTRLP40313 264 aa13.86□□□□□ -0.19
SMAD1-211ENST00000512019 SPANXN1Q5VSR9 72 aa13.86□□□□□ -0.19
SMAD1-211ENST00000512019 OR10AG1Q8NH19 301 aa13.86□□□□□ -0.19
SMAD1-211ENST00000512019 ANAPC16Q96DE5 110 aa13.86□□□□□ -0.19
SMAD1-211ENST00000512019 KMT2AQ03164 3969 aa13.85□□□□□ -0.19
SMAD1-211ENST00000512019 M0R381 172 aa13.85□□□□□ -0.19
SMAD1-211ENST00000512019 NXPH4O95158 308 aa13.85□□□□□ -0.19
SMAD1-211ENST00000512019 ATP5G1P05496 136 aa13.85□□□□□ -0.19
SMAD1-211ENST00000512019 RNF212Q495C1 297 aa13.85□□□□□ -0.19
SMAD1-211ENST00000512019 GTSF1Q8WW33 167 aa13.85□□□□□ -0.19
SMAD1-211ENST00000512019 CACNG7P62955 275 aa13.84□□□□□ -0.19
SMAD1-211ENST00000512019 DMRTA1Q5VZB9 504 aa13.84□□□□□ -0.19
SMAD1-211ENST00000512019 LYZL1Q6UWQ5 148 aa13.84□□□□□ -0.19
SMAD1-211ENST00000512019 TRAV10A0A0B4J240 114 aa13.83□□□□□ -0.2
SMAD1-211ENST00000512019 TRAV4A0A0B4J268 109 aa13.83□□□□□ -0.2
SMAD1-211ENST00000512019 HIGD1CA8MV81 97 aa13.83□□□□□ -0.2
SMAD1-211ENST00000512019 A8MWV9 139 aa13.83□□□□□ -0.2
SMAD1-211ENST00000512019 BORCS7Q96B45 105 aa13.83□□□□□ -0.2
SMAD1-211ENST00000512019 MUC4Q99102 2169 aa13.82□□□□□ -0.2
SMAD1-211ENST00000512019 DNAH10Q8IVF4 4471 aa13.82□□□□□ -0.2
SMAD1-211ENST00000512019 MUC21A0A0G2JKD1 596 aa13.82□□□□□ -0.2
SMAD1-211ENST00000512019 MUC21A0A140T8X8 626 aa13.82□□□□□ -0.2
SMAD1-211ENST00000512019 NUPR2A6NF83 97 aa13.82□□□□□ -0.2
SMAD1-211ENST00000512019 APOC3P02656 99 aa13.82□□□□□ -0.2
SMAD1-211ENST00000512019 HTN3P15516 51 aa13.82□□□□□ -0.2
SMAD1-211ENST00000512019 FOXA3P55318 350 aaPredicted RBP13.82□□□□□ -0.2
SMAD1-211ENST00000512019 WDR73Q6P4I2 378 aa13.82□□□□□ -0.2
SMAD1-211ENST00000512019 SVBPQ8N300 66 aa13.82□□□□□ -0.2
SMAD1-211ENST00000512019 OR4C5Q8NGB2 326 aa13.82□□□□□ -0.2
SMAD1-211ENST00000512019 PHLDA1Q8WV24 401 aaPredicted RBP13.82□□□□□ -0.2
SMAD1-211ENST00000512019 CNFNQ9BYD5 112 aa13.82□□□□□ -0.2
SMAD1-211ENST00000512019 NAT8BQ9UHF3 227 aa13.82□□□□□ -0.2
SMAD1-211ENST00000512019 DEFB131BA0A096LNP1 70 aa13.81□□□□□ -0.2
SMAD1-211ENST00000512019 SMIM27A0A1W2PRY6 76 aa13.81□□□□□ -0.2
SMAD1-211ENST00000512019 RHEBQ15382 184 aa13.81□□□□□ -0.2
SMAD1-211ENST00000512019 CEMP1Q6PRD7 247 aaPredicted RBP13.81□□□□□ -0.2
SMAD1-211ENST00000512019 CLRN3Q8NCR9 226 aa13.81□□□□□ -0.2
SMAD1-211ENST00000512019 PGLYRP4Q96LB8 373 aa13.81□□□□□ -0.2
SMAD1-211ENST00000512019 CTDSP1Q9GZU7 261 aa13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 82.8 ms