RNA–Protein interactions for RNA: ENST00000512009.5

TRAPPC13-211, Transcript of trafficking protein particle complex 13, humanhuman

TSL 2

Gene TRAPPC13, Length 5,994 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-211ENST00000512009 NSUN5P1Q3KNT7 163 aa1.31□□□□□ -2.2
TRAPPC13-211ENST00000512009 Q5PR19 223 aa1.31□□□□□ -2.2
TRAPPC13-211ENST00000512009 NCMAPQ5T1S8 102 aa1.31□□□□□ -2.2
TRAPPC13-211ENST00000512009 GAGE2AQ6NT46 116 aa1.31□□□□□ -2.2
TRAPPC13-211ENST00000512009 ZNF493Q6ZR52 646 aa1.31□□□□□ -2.2
TRAPPC13-211ENST00000512009 SEM1Q6ZVN7 128 aa1.31□□□□□ -2.2
TRAPPC13-211ENST00000512009 LINC00596Q86U02 117 aa1.31□□□□□ -2.2
TRAPPC13-211ENST00000512009 ORMDL3Q8N138 153 aa1.31□□□□□ -2.2
TRAPPC13-211ENST00000512009 IMMP1LQ96LU5 166 aa1.31□□□□□ -2.2
TRAPPC13-211ENST00000512009 MRPL32Q9BYC8 188 aaKnown RBP1.31□□□□□ -2.2
TRAPPC13-211ENST00000512009 IDI2-AS1Q9NZ38 188 aa1.31□□□□□ -2.2
TRAPPC13-211ENST00000512009 IL36BQ9NZH7 164 aa1.31□□□□□ -2.2
TRAPPC13-211ENST00000512009 CTSZQ9UBR2 303 aa1.31□□□□□ -2.2
TRAPPC13-211ENST00000512009 V9GYY9 64 aa1.31□□□□□ -2.2
TRAPPC13-211ENST00000512009 TRBV9A0A0B4J1U6 114 aa1.3□□□□□ -2.2
TRAPPC13-211ENST00000512009 C7orf71A4D174 169 aa1.3□□□□□ -2.2
TRAPPC13-211ENST00000512009 LYRM9A8MSI8 78 aa1.3□□□□□ -2.2
TRAPPC13-211ENST00000512009 K7EN84 100 aa1.3□□□□□ -2.2
TRAPPC13-211ENST00000512009 NDUFS7O75251 213 aa1.3□□□□□ -2.2
TRAPPC13-211ENST00000512009 IGKV4-1P06312 121 aa1.3□□□□□ -2.2
TRAPPC13-211ENST00000512009 RFPL3SP0C7P2 107 aa1.3□□□□□ -2.2
TRAPPC13-211ENST00000512009 HLA-DRB4P13762 266 aa1.3□□□□□ -2.2
TRAPPC13-211ENST00000512009 CDKN1AP38936 164 aa1.3□□□□□ -2.2
TRAPPC13-211ENST00000512009 XCL1P47992 114 aa1.3□□□□□ -2.2
TRAPPC13-211ENST00000512009 LCN2P80188 198 aa1.3□□□□□ -2.2
TRAPPC13-211ENST00000512009 MRPL23Q16540 153 aaKnown RBP1.3□□□□□ -2.2
TRAPPC13-211ENST00000512009 NREPQ16612 68 aa1.3□□□□□ -2.2
TRAPPC13-211ENST00000512009 ZNF876PQ49A33 203 aa1.3□□□□□ -2.2
TRAPPC13-211ENST00000512009 IBA57Q5T440 356 aaKnown RBP1.3□□□□□ -2.2
TRAPPC13-211ENST00000512009 PRNTQ86SH4 94 aa1.3□□□□□ -2.2
TRAPPC13-211ENST00000512009 NIT1Q86X76 327 aa1.3□□□□□ -2.2
TRAPPC13-211ENST00000512009 TMEM229BQ8NBD8 167 aa1.3□□□□□ -2.2
TRAPPC13-211ENST00000512009 OR10D4PQ8NGN7 298 aa1.3□□□□□ -2.2
TRAPPC13-211ENST00000512009 COQ2Q96H96 371 aa1.3□□□□□ -2.2
TRAPPC13-211ENST00000512009 SIGLEC8Q9NYZ4 499 aa1.3□□□□□ -2.2
TRAPPC13-211ENST00000512009 FBXL7Q9UJT9 491 aa1.3□□□□□ -2.2
TRAPPC13-211ENST00000512009 R4GMQ9 66 aa1.3□□□□□ -2.2
TRAPPC13-211ENST00000512009 HLA-DRB4X5D2U9 266 aa1.3□□□□□ -2.2
TRAPPC13-211ENST00000512009 BUB1B-PAK6H3BSN5 160 aa1.3□□□□□ -2.2
TRAPPC13-211ENST00000512009 CDIPTO14735 213 aa1.3□□□□□ -2.2
TRAPPC13-211ENST00000512009 TCL1BO95988 128 aa1.3□□□□□ -2.2
TRAPPC13-211ENST00000512009 ZNF32P17041 273 aa1.3□□□□□ -2.2
TRAPPC13-211ENST00000512009 ZNF117Q03924 483 aa1.3□□□□□ -2.2
TRAPPC13-211ENST00000512009 Q0VFX4 171 aa1.3□□□□□ -2.2
TRAPPC13-211ENST00000512009 OCIAD2Q56VL3 154 aa1.3□□□□□ -2.2
TRAPPC13-211ENST00000512009 FAM104BQ5XKR9 115 aa1.3□□□□□ -2.2
TRAPPC13-211ENST00000512009 TMEM243Q9BU79 118 aa1.3□□□□□ -2.2
TRAPPC13-211ENST00000512009 PARD6GQ9BYG4 376 aaPredicted RBP1.3□□□□□ -2.2
TRAPPC13-211ENST00000512009 RPP21Q9H633 154 aaKnown RBP1.3□□□□□ -2.2
TRAPPC13-211ENST00000512009 TRBV25-1A0A075B6N4 114 aa1.3□□□□□ -2.2
TRAPPC13-211ENST00000512009 TRBV6-6A0A0A6YYG2 114 aa1.3□□□□□ -2.2
TRAPPC13-211ENST00000512009 A0A1W2PQD3 144 aa1.3□□□□□ -2.2
TRAPPC13-211ENST00000512009 E7EUB6 86 aa1.3□□□□□ -2.2
TRAPPC13-211ENST00000512009 GYPBP06028 91 aa1.3□□□□□ -2.2
TRAPPC13-211ENST00000512009 SMCPP49901 116 aaPredicted RBP1.3□□□□□ -2.2
TRAPPC13-211ENST00000512009 UBE2D1P51668 147 aa1.3□□□□□ -2.2
TRAPPC13-211ENST00000512009 HERVK_113P63121 156 aa1.3□□□□□ -2.2
TRAPPC13-211ENST00000512009 ZNF124Q15973 351 aa1.3□□□□□ -2.2
TRAPPC13-211ENST00000512009 ACTL10Q5JWF8 245 aa1.3□□□□□ -2.2
TRAPPC13-211ENST00000512009 SPATA46Q5T0L3 261 aa1.3□□□□□ -2.2
TRAPPC13-211ENST00000512009 ZFAND6Q6FIF0 208 aa1.3□□□□□ -2.2
TRAPPC13-211ENST00000512009 SPACA3Q8IXA5 215 aa1.3□□□□□ -2.2
TRAPPC13-211ENST00000512009 FAM216AQ8WUB2 273 aa1.3□□□□□ -2.2
TRAPPC13-211ENST00000512009 USMG5Q96IX5 58 aa1.3□□□□□ -2.2
TRAPPC13-211ENST00000512009 B9D2Q9BPU9 175 aa1.3□□□□□ -2.2
TRAPPC13-211ENST00000512009 Q9H3A6 140 aa1.3□□□□□ -2.2
TRAPPC13-211ENST00000512009 IGKV2D-24A0A075B6R9 120 aa1.3□□□□□ -2.2
TRAPPC13-211ENST00000512009 TRAV3A0A0B4J244 114 aa1.3□□□□□ -2.2
TRAPPC13-211ENST00000512009 A0A0U1RRA0 63 aa1.3□□□□□ -2.2
TRAPPC13-211ENST00000512009 SPAARA0A1B0GVQ0 90 aa1.3□□□□□ -2.2
TRAPPC13-211ENST00000512009 A0A1W2PRX2 142 aa1.3□□□□□ -2.2
TRAPPC13-211ENST00000512009 FAM90A7PA6NKC0 464 aa1.3□□□□□ -2.2
TRAPPC13-211ENST00000512009 FAM90A22PA8MWA6 464 aa1.3□□□□□ -2.2
TRAPPC13-211ENST00000512009 FAM90A12PA8MX19 464 aa1.3□□□□□ -2.2
TRAPPC13-211ENST00000512009 FAM90A23PA8MXZ1 464 aa1.3□□□□□ -2.2
TRAPPC13-211ENST00000512009 NCR3O14931 201 aa1.3□□□□□ -2.2
TRAPPC13-211ENST00000512009 IGKV1-5P01602 117 aa1.3□□□□□ -2.2
TRAPPC13-211ENST00000512009 NBEAP1P0C6P0 100 aa1.3□□□□□ -2.2
TRAPPC13-211ENST00000512009 SPART-AS1P0CW21 52 aa1.3□□□□□ -2.2
TRAPPC13-211ENST00000512009 GATA1P15976 413 aaPredicted RBP1.3□□□□□ -2.2
TRAPPC13-211ENST00000512009 EWSR1Q01844 656 aaKnown RBP eCLIP1.3□□□□□ -2.2
TRAPPC13-211ENST00000512009 CFHR3Q02985 330 aa1.3□□□□□ -2.2
TRAPPC13-211ENST00000512009 PDE6HQ13956 83 aa1.3□□□□□ -2.2
TRAPPC13-211ENST00000512009 BEAN1Q3B7T3 259 aa1.3□□□□□ -2.2
TRAPPC13-211ENST00000512009 FCRLBQ6BAA4 426 aa1.3□□□□□ -2.2
TRAPPC13-211ENST00000512009 C2orf82Q6UX34 121 aa1.3□□□□□ -2.2
TRAPPC13-211ENST00000512009 ZNF826PQ6ZT77 177 aa1.3□□□□□ -2.2
TRAPPC13-211ENST00000512009 MARCH3Q86UD3 253 aa1.3□□□□□ -2.2
TRAPPC13-211ENST00000512009 ATOH7Q8N100 152 aa1.3□□□□□ -2.2
TRAPPC13-211ENST00000512009 ZNF436-AS1Q8NC38 126 aaPredicted RBP1.3□□□□□ -2.2
TRAPPC13-211ENST00000512009 RNASE6Q93091 150 aaKnown RBP1.3□□□□□ -2.2
TRAPPC13-211ENST00000512009 RNF5Q99942 180 aa1.3□□□□□ -2.2
TRAPPC13-211ENST00000512009 FZR1Q9UM11 496 aa1.3□□□□□ -2.2
TRAPPC13-211ENST00000512009 TRAV8-1A0A0A6YYK1 113 aa1.3□□□□□ -2.2
TRAPPC13-211ENST00000512009 NPIPB5A8MRT5 1133 aa1.3□□□□□ -2.2
TRAPPC13-211ENST00000512009 KISS1Q15726 138 aa1.3□□□□□ -2.2
TRAPPC13-211ENST00000512009 TMEM88Q6PEY1 159 aa1.3□□□□□ -2.2
TRAPPC13-211ENST00000512009 LINC00305Q7Z4B0 112 aa1.3□□□□□ -2.2
TRAPPC13-211ENST00000512009 FER1L6-AS1Q8NA97 138 aa1.3□□□□□ -2.2
TRAPPC13-211ENST00000512009 CHCHD1Q96BP2 118 aaKnown RBP1.3□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms