RNA–Protein interactions for RNA: ENST00000510906.5

PDPN-209, Transcript of podoplanin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PDPN, Length 786 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-209ENST00000510906 SGK494Q96LW2 274 aa5.92□□□□□ -1.46
PDPN-209ENST00000510906 Q9H8V8 135 aa5.92□□□□□ -1.46
PDPN-209ENST00000510906 MRPS16Q9Y3D3 137 aaKnown RBP5.92□□□□□ -1.46
PDPN-209ENST00000510906 GNRH2O43555 120 aa5.91□□□□□ -1.46
PDPN-209ENST00000510906 SFTA3P0C7M3 94 aa5.91□□□□□ -1.46
PDPN-209ENST00000510906 SERF2P84101 59 aa5.91□□□□□ -1.46
PDPN-209ENST00000510906 ZNF575Q86XF7 245 aa5.91□□□□□ -1.46
PDPN-209ENST00000510906 ARL6IP6Q8N6S5 226 aa5.91□□□□□ -1.46
PDPN-209ENST00000510906 INO80EQ8NBZ0 244 aaPredicted RBP5.91□□□□□ -1.46
PDPN-209ENST00000510906 OR2T35Q8NGX2 323 aa5.91□□□□□ -1.46
PDPN-209ENST00000510906 SUN5Q8TC36 379 aa5.91□□□□□ -1.46
PDPN-209ENST00000510906 UPK3BQ9BT76 320 aa5.91□□□□□ -1.46
PDPN-209ENST00000510906 TREM1Q9NP99 234 aa5.91□□□□□ -1.46
PDPN-209ENST00000510906 TNFSF18Q9UNG2 199 aa5.91□□□□□ -1.46
PDPN-209ENST00000510906 MUC4Q99102 2169 aa5.9□□□□□ -1.46
PDPN-209ENST00000510906 TRAV21A0A0B4J279 112 aa5.9□□□□□ -1.46
PDPN-209ENST00000510906 IGHV3-16A0A0C4DH30 117 aa5.9□□□□□ -1.46
PDPN-209ENST00000510906 GGTLC3B5MD39 225 aa5.9□□□□□ -1.46
PDPN-209ENST00000510906 G3V3Q6 166 aa5.9□□□□□ -1.46
PDPN-209ENST00000510906 MBP02144 154 aa5.9□□□□□ -1.46
PDPN-209ENST00000510906 TCRAP04437 139 aa5.9□□□□□ -1.46
PDPN-209ENST00000510906 CRYBA4P53673 196 aa5.9□□□□□ -1.46
PDPN-209ENST00000510906 TDRG1Q3Y452 100 aa5.9□□□□□ -1.46
PDPN-209ENST00000510906 TTC32Q5I0X7 151 aa5.9□□□□□ -1.46
PDPN-209ENST00000510906 IQCF2Q8IXL9 164 aa5.9□□□□□ -1.46
PDPN-209ENST00000510906 C5orf17Q8NAS9 161 aa5.9□□□□□ -1.46
PDPN-209ENST00000510906 ZNF479Q96JC4 524 aa5.9□□□□□ -1.46
PDPN-209ENST00000510906 SPXQ9BT56 116 aa5.9□□□□□ -1.46
PDPN-209ENST00000510906 ACTR3CQ9C0K3 210 aaPredicted RBP5.9□□□□□ -1.46
PDPN-209ENST00000510906 PRO0255Q9UI72 69 aa5.9□□□□□ -1.46
PDPN-209ENST00000510906 HHLA3Q9XRX5 114 aa5.9□□□□□ -1.46
PDPN-209ENST00000510906 ICOSQ9Y6W8 199 aa5.9□□□□□ -1.46
PDPN-209ENST00000510906 BORCS7-ASMTA0A0B4J1R7 106 aa5.89□□□□□ -1.47
PDPN-209ENST00000510906 TRGV4A0A0C4DH28 118 aa5.89□□□□□ -1.47
PDPN-209ENST00000510906 ATP6V1G1O75348 118 aa5.89□□□□□ -1.47
PDPN-209ENST00000510906 CXorf1O96002 111 aa5.89□□□□□ -1.47
PDPN-209ENST00000510906 IGLV2-11P01706 119 aa5.89□□□□□ -1.47
PDPN-209ENST00000510906 TYMSP04818 313 aa5.89□□□□□ -1.47
PDPN-209ENST00000510906 ZNF80P51504 273 aaPredicted RBP5.89□□□□□ -1.47
PDPN-209ENST00000510906 ZNF726P1Q15940 193 aa5.89□□□□□ -1.47
PDPN-209ENST00000510906 MPLKIPQ8TAP9 179 aa5.89□□□□□ -1.47
PDPN-209ENST00000510906 RASL10AQ92737 203 aa5.89□□□□□ -1.47
PDPN-209ENST00000510906 NDFIP1Q9BT67 221 aa5.89□□□□□ -1.47
PDPN-209ENST00000510906 TMEM167BQ9NRX6 74 aa5.89□□□□□ -1.47
PDPN-209ENST00000510906 C11orf21Q9P2W6 132 aa5.89□□□□□ -1.47
PDPN-209ENST00000510906 EPDR1Q9UM22 224 aa5.89□□□□□ -1.47
PDPN-209ENST00000510906 PSG8Q9UQ74 426 aa5.89□□□□□ -1.47
PDPN-209ENST00000510906 LRP1BQ9NZR2 4599 aa5.88□□□□□ -1.47
PDPN-209ENST00000510906 SERTM2A0A1B0GWG4 89 aa5.88□□□□□ -1.47
PDPN-209ENST00000510906 SMLR1H3BR10 107 aa5.88□□□□□ -1.47
PDPN-209ENST00000510906 NXPH4O95158 308 aa5.88□□□□□ -1.47
PDPN-209ENST00000510906 NKX2-5P52952 324 aaPredicted RBP5.88□□□□□ -1.47
PDPN-209ENST00000510906 SLAQ13239 276 aa5.88□□□□□ -1.47
PDPN-209ENST00000510906 MRPL23Q16540 153 aaKnown RBP5.88□□□□□ -1.47
PDPN-209ENST00000510906 TMEM75Q8N9X5 138 aa5.88□□□□□ -1.47
PDPN-209ENST00000510906 NTN5Q8WTR8 489 aaPredicted RBP5.88□□□□□ -1.47
PDPN-209ENST00000510906 SDF2L1Q9HCN8 221 aa5.88□□□□□ -1.47
PDPN-209ENST00000510906 TRAV4A0A0B4J268 109 aa5.87□□□□□ -1.47
PDPN-209ENST00000510906 TRAV34A0A0B4J273 112 aa5.87□□□□□ -1.47
PDPN-209ENST00000510906 CTXND1A0A1B0GTU2 59 aa5.87□□□□□ -1.47
PDPN-209ENST00000510906 A0A1W2PPQ1 181 aa5.87□□□□□ -1.47
PDPN-209ENST00000510906 A0A1W2PRE2 83 aa5.87□□□□□ -1.47
PDPN-209ENST00000510906 K7EQM0 130 aa5.87□□□□□ -1.47
PDPN-209ENST00000510906 M0R2P5 195 aa5.87□□□□□ -1.47
PDPN-209ENST00000510906 SIVA1O15304 175 aa5.87□□□□□ -1.47
PDPN-209ENST00000510906 ARPC5O15511 151 aa5.87□□□□□ -1.47
PDPN-209ENST00000510906 GCGP01275 180 aa5.87□□□□□ -1.47
PDPN-209ENST00000510906 S100A1P23297 94 aa5.87□□□□□ -1.47
PDPN-209ENST00000510906 CAMPP49913 170 aa5.87□□□□□ -1.47
PDPN-209ENST00000510906 FGF8P55075 233 aaPredicted RBP5.87□□□□□ -1.47
PDPN-209ENST00000510906 UBE2G2P60604 165 aa5.87□□□□□ -1.47
PDPN-209ENST00000510906 FLI1Q01543 452 aaPredicted RBP5.87□□□□□ -1.47
PDPN-209ENST00000510906 IFITM2Q01629 132 aa5.87□□□□□ -1.47
PDPN-209ENST00000510906 LYPD5Q6UWN5 251 aa5.87□□□□□ -1.47
PDPN-209ENST00000510906 NEGR1Q7Z3B1 354 aa5.87□□□□□ -1.47
PDPN-209ENST00000510906 PRNTQ86SH4 94 aa5.87□□□□□ -1.47
PDPN-209ENST00000510906 CYB561D1Q8N8Q1 229 aa5.87□□□□□ -1.47
PDPN-209ENST00000510906 OR4C5Q8NGB2 326 aa5.87□□□□□ -1.47
PDPN-209ENST00000510906 KCNS1Q96KK3 526 aa5.87□□□□□ -1.47
PDPN-209ENST00000510906 LINC00479Q96M42 142 aa5.87□□□□□ -1.47
PDPN-209ENST00000510906 CYTL1Q9NRR1 136 aa5.87□□□□□ -1.47
PDPN-209ENST00000510906 LOC100131303A0A0U1RQF7 123 aa5.86□□□□□ -1.47
PDPN-209ENST00000510906 C9JCJ5 164 aa5.86□□□□□ -1.47
PDPN-209ENST00000510906 K7EQD1 137 aa5.86□□□□□ -1.47
PDPN-209ENST00000510906 IFNA7P01567 189 aa5.86□□□□□ -1.47
PDPN-209ENST00000510906 SRIP30626 198 aa5.86□□□□□ -1.47
PDPN-209ENST00000510906 LINC00315P59091 139 aa5.86□□□□□ -1.47
PDPN-209ENST00000510906 SMUG1Q53HV7 270 aa5.86□□□□□ -1.47
PDPN-209ENST00000510906 AKR1C8PQ5T2L2 129 aa5.86□□□□□ -1.47
PDPN-209ENST00000510906 PRSS3P2Q8NHM4 247 aa5.86□□□□□ -1.47
PDPN-209ENST00000510906 RNF213Q63HN8 5207 aa5.85□□□□□ -1.47
PDPN-209ENST00000510906 HMCN2Q8NDA2 5059 aa5.85□□□□□ -1.47
PDPN-209ENST00000510906 MAP1LC3B2A6NCE7 125 aa5.85□□□□□ -1.47
PDPN-209ENST00000510906 FAM74A7A6NL05 159 aa5.85□□□□□ -1.47
PDPN-209ENST00000510906 C16orf90A8MZG2 172 aa5.85□□□□□ -1.47
PDPN-209ENST00000510906 TAAR5O14804 337 aa5.85□□□□□ -1.47
PDPN-209ENST00000510906 PFN1P07737 140 aaKnown RBP5.85□□□□□ -1.47
PDPN-209ENST00000510906 ZNF876PQ49A33 203 aa5.85□□□□□ -1.47
PDPN-209ENST00000510906 DPPA3Q6W0C5 159 aa5.85□□□□□ -1.47
PDPN-209ENST00000510906 SPATA12Q7Z6I5 190 aa5.85□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms