RNA–Protein interactions for RNA: ENST00000509409.5

TPM3-219, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 1,248 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-219ENST00000509409 GGTLC3B5MD39 225 aa10.35□□□□□ -0.75
TPM3-219ENST00000509409 IFNA7P01567 189 aa10.35□□□□□ -0.75
TPM3-219ENST00000509409 IGHV3-30P01768 117 aa10.35□□□□□ -0.75
TPM3-219ENST00000509409 IGHV3-33P01772 117 aa10.35□□□□□ -0.75
TPM3-219ENST00000509409 IGHV3-30-3P0DP02 117 aa10.35□□□□□ -0.75
TPM3-219ENST00000509409 IGHV3-30-5P0DP03 117 aa10.35□□□□□ -0.75
TPM3-219ENST00000509409 ZNF506Q5JVG8 444 aa10.35□□□□□ -0.75
TPM3-219ENST00000509409 ATP6V0E2Q8NHE4 81 aa10.35□□□□□ -0.75
TPM3-219ENST00000509409 C9orf85Q96MD7 179 aa10.35□□□□□ -0.75
TPM3-219ENST00000509409 BORCS7-ASMTA0A0B4J1R7 106 aa10.34□□□□□ -0.75
TPM3-219ENST00000509409 TRAV34A0A0B4J273 112 aa10.34□□□□□ -0.75
TPM3-219ENST00000509409 IBA57-AS1B1ANH7 110 aa10.34□□□□□ -0.75
TPM3-219ENST00000509409 IGLV2-11P01706 119 aa10.34□□□□□ -0.75
TPM3-219ENST00000509409 INAFM2P0DMQ5 153 aa10.34□□□□□ -0.75
TPM3-219ENST00000509409 LGALSLQ3ZCW2 172 aaPredicted RBP10.34□□□□□ -0.75
TPM3-219ENST00000509409 Q5BKY6 102 aa10.34□□□□□ -0.75
TPM3-219ENST00000509409 LELP1Q5T871 98 aa10.34□□□□□ -0.75
TPM3-219ENST00000509409 FRZBQ92765 325 aa10.34□□□□□ -0.75
TPM3-219ENST00000509409 PTH2Q96A98 100 aa10.34□□□□□ -0.75
TPM3-219ENST00000509409 LINC00479Q96M42 142 aa10.34□□□□□ -0.75
TPM3-219ENST00000509409 GTSF1LQ9H1H1 148 aa10.34□□□□□ -0.75
TPM3-219ENST00000509409 BATF3Q9NR55 127 aa10.34□□□□□ -0.75
TPM3-219ENST00000509409 IGLV5-52A0A0A0MRZ9 124 aa10.33□□□□□ -0.76
TPM3-219ENST00000509409 A0A1W2PRE2 83 aa10.33□□□□□ -0.76
TPM3-219ENST00000509409 PTTG1O95997 202 aa10.33□□□□□ -0.76
TPM3-219ENST00000509409 MGST1P10620 155 aaKnown RBP10.33□□□□□ -0.76
TPM3-219ENST00000509409 RNASE3P12724 160 aaKnown RBP10.33□□□□□ -0.76
TPM3-219ENST00000509409 UBE2G2P60604 165 aa10.33□□□□□ -0.76
TPM3-219ENST00000509409 RPL7L1Q6DKI1 246 aaKnown RBP10.33□□□□□ -0.76
TPM3-219ENST00000509409 FXYD6-FXYD2A0A087WZ82 144 aa10.32□□□□□ -0.76
TPM3-219ENST00000509409 FABP5P3A8MUU1 101 aa10.32□□□□□ -0.76
TPM3-219ENST00000509409 SMR3BP02814 79 aaPredicted RBP10.32□□□□□ -0.76
TPM3-219ENST00000509409 LRCOL1A6NCL2 159 aa10.31□□□□□ -0.76
TPM3-219ENST00000509409 GAGE12JA6NER3 117 aa10.31□□□□□ -0.76
TPM3-219ENST00000509409 A8MWV9 139 aa10.31□□□□□ -0.76
TPM3-219ENST00000509409 GIPP09681 153 aaPredicted RBP10.31□□□□□ -0.76
TPM3-219ENST00000509409 ASIPP42127 132 aa10.31□□□□□ -0.76
TPM3-219ENST00000509409 GAGE1Q13065 139 aa10.31□□□□□ -0.76
TPM3-219ENST00000509409 GAGE4Q13068 117 aa10.31□□□□□ -0.76
TPM3-219ENST00000509409 GAGE5Q13069 117 aa10.31□□□□□ -0.76
TPM3-219ENST00000509409 GAGE13Q4V321 117 aa10.31□□□□□ -0.76
TPM3-219ENST00000509409 Q5VSD8 79 aa10.31□□□□□ -0.76
TPM3-219ENST00000509409 OR2T35Q8NGX2 323 aa10.31□□□□□ -0.76
TPM3-219ENST00000509409 ARL2-SNX15V9GYD0 113 aa10.31□□□□□ -0.76
TPM3-219ENST00000509409 IGKV3D-20A0A0C4DH25 116 aa10.3□□□□□ -0.76
TPM3-219ENST00000509409 CTXND1A0A1B0GTU2 59 aa10.3□□□□□ -0.76
TPM3-219ENST00000509409 AKR1C8PQ5T2L2 129 aa10.3□□□□□ -0.76
TPM3-219ENST00000509409 Q6ZSN1 163 aa10.3□□□□□ -0.76
TPM3-219ENST00000509409 NTN5Q8WTR8 489 aaPredicted RBP10.3□□□□□ -0.76
TPM3-219ENST00000509409 TM2D2Q9BX73 214 aa10.3□□□□□ -0.76
TPM3-219ENST00000509409 PARLQ9H300 379 aa10.3□□□□□ -0.76
TPM3-219ENST00000509409 FAT1Q14517 4588 aa10.3□□□□□ -0.76
TPM3-219ENST00000509409 B4DEV8 164 aa10.29□□□□□ -0.76
TPM3-219ENST00000509409 PEX7O00628 323 aa10.29□□□□□ -0.76
TPM3-219ENST00000509409 FGF8P55075 233 aaPredicted RBP10.29□□□□□ -0.76
TPM3-219ENST00000509409 ZNF726P1Q15940 193 aa10.29□□□□□ -0.76
TPM3-219ENST00000509409 ZFP2Q6ZN57 461 aa10.29□□□□□ -0.76
TPM3-219ENST00000509409 JPT2Q9H910 190 aa10.29□□□□□ -0.76
TPM3-219ENST00000509409 VPS13BQ7Z7G8 4022 aa10.28□□□□□ -0.76
TPM3-219ENST00000509409 RNF222A6NCQ9 220 aa10.28□□□□□ -0.76
TPM3-219ENST00000509409 FAM229AH3BQW9 127 aa10.28□□□□□ -0.76
TPM3-219ENST00000509409 HAMPP81172 84 aa10.28□□□□□ -0.76
TPM3-219ENST00000509409 Q8N814 137 aa10.28□□□□□ -0.76
TPM3-219ENST00000509409 SYT8Q8NBV8 401 aa10.28□□□□□ -0.76
TPM3-219ENST00000509409 NKX6-2Q9C056 277 aaPredicted RBP10.28□□□□□ -0.76
TPM3-219ENST00000509409 FAM74A7A6NL05 159 aa10.27□□□□□ -0.77
TPM3-219ENST00000509409 H3BVH4 76 aa10.27□□□□□ -0.77
TPM3-219ENST00000509409 PIK3CD-AS1Q5SR53 167 aa10.27□□□□□ -0.77
TPM3-219ENST00000509409 HIST1H2BAQ96A08 127 aa10.27□□□□□ -0.77
TPM3-219ENST00000509409 GRIFINA4D1Z8 144 aa10.26□□□□□ -0.77
TPM3-219ENST00000509409 M0R036 132 aa10.26□□□□□ -0.77
TPM3-219ENST00000509409 ARMS2P0C7Q2 107 aa10.26□□□□□ -0.77
TPM3-219ENST00000509409 UBE2G1P62253 170 aa10.26□□□□□ -0.77
TPM3-219ENST00000509409 Q86TA4 180 aa10.26□□□□□ -0.77
TPM3-219ENST00000509409 C14orf178Q8N769 122 aaPredicted RBP10.26□□□□□ -0.77
TPM3-219ENST00000509409 TMEM70Q9BUB7 260 aa10.26□□□□□ -0.77
TPM3-219ENST00000509409 SAMD10Q9BYL1 202 aa10.26□□□□□ -0.77
TPM3-219ENST00000509409 IL36BQ9NZH7 164 aa10.26□□□□□ -0.77
TPM3-219ENST00000509409 ZFP30Q9Y2G7 519 aa10.26□□□□□ -0.77
TPM3-219ENST00000509409 TRAV8-3A0A0A6YYJ7 113 aa10.25□□□□□ -0.77
TPM3-219ENST00000509409 KRBOX1C9JBD0 128 aa10.25□□□□□ -0.77
TPM3-219ENST00000509409 SH2D1AO60880 128 aa10.25□□□□□ -0.77
TPM3-219ENST00000509409 LAGE3Q14657 143 aa10.25□□□□□ -0.77
TPM3-219ENST00000509409 TOR2AQ5JU69 321 aa10.25□□□□□ -0.77
TPM3-219ENST00000509409 Q8N3U1 123 aa10.25□□□□□ -0.77
TPM3-219ENST00000509409 OR11H4Q8NGC9 324 aa10.25□□□□□ -0.77
TPM3-219ENST00000509409 ZC2HC1AQ96GY0 325 aa10.25□□□□□ -0.77
TPM3-219ENST00000509409 A0A087WWC5 75 aa10.24□□□□□ -0.77
TPM3-219ENST00000509409 TMSB15BA0A087X1C1 80 aa10.24□□□□□ -0.77
TPM3-219ENST00000509409 MAP1LC3B2A6NCE7 125 aa10.24□□□□□ -0.77
TPM3-219ENST00000509409 CRIP1P50238 77 aa10.24□□□□□ -0.77
TPM3-219ENST00000509409 FAM162BQ5T6X4 162 aa10.24□□□□□ -0.77
TPM3-219ENST00000509409 FAM74A4Q5TZK3 123 aa10.24□□□□□ -0.77
TPM3-219ENST00000509409 CST9LP1Q5W188 147 aa10.24□□□□□ -0.77
TPM3-219ENST00000509409 DAZ4Q86SG3 579 aaKnown RBP10.24□□□□□ -0.77
TPM3-219ENST00000509409 STOML3Q8TAV4 291 aa10.24□□□□□ -0.77
TPM3-219ENST00000509409 FMC1Q96HJ9 113 aa10.24□□□□□ -0.77
TPM3-219ENST00000509409 MAP1LC3BQ9GZQ8 125 aa10.24□□□□□ -0.77
TPM3-219ENST00000509409 DAZ3Q9NR90 486 aaKnown RBP10.24□□□□□ -0.77
TPM3-219ENST00000509409 Q9UF83 564 aa10.24□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 122.7 ms