RNA–Protein interactions for RNA: ENST00000509389.5

HMGCL-208, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

TSL 1 (best)

Gene HMGCL, Length 1,379 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-208ENST00000509389 S100PP25815 95 aa10.41□□□□□ -0.74
HMGCL-208ENST00000509389 TSPOP30536 169 aa10.41□□□□□ -0.74
HMGCL-208ENST00000509389 FXYD7P58549 80 aa10.41□□□□□ -0.74
HMGCL-208ENST00000509389 KIR3DS1Q14943 382 aa10.41□□□□□ -0.74
HMGCL-208ENST00000509389 TDRG1Q3Y452 100 aa10.41□□□□□ -0.74
HMGCL-208ENST00000509389 GFI1BQ5VTD9 330 aa10.41□□□□□ -0.74
HMGCL-208ENST00000509389 ZNF705AQ6ZN79 300 aaPredicted RBP10.41□□□□□ -0.74
HMGCL-208ENST00000509389 URGCP-MRPS24S4R325 110 aa10.41□□□□□ -0.74
HMGCL-208ENST00000509389 TGIF2-C20orf24A0A0A6YYL0 155 aa10.4□□□□□ -0.74
HMGCL-208ENST00000509389 GPX1P07203 203 aa10.4□□□□□ -0.74
HMGCL-208ENST00000509389 CTRLP40313 264 aa10.4□□□□□ -0.74
HMGCL-208ENST00000509389 RPS20P60866 119 aaKnown RBP10.4□□□□□ -0.74
HMGCL-208ENST00000509389 RPL19P84098 196 aaKnown RBP10.4□□□□□ -0.74
HMGCL-208ENST00000509389 DNLZQ5SXM8 178 aa10.4□□□□□ -0.74
HMGCL-208ENST00000509389 NAT8BQ9UHF3 227 aa10.4□□□□□ -0.74
HMGCL-208ENST00000509389 KIAA1109Q2LD37 5005 aa10.4□□□□□ -0.74
HMGCL-208ENST00000509389 A0A1W2PPQ1 181 aa10.39□□□□□ -0.75
HMGCL-208ENST00000509389 HIGD1CA8MV81 97 aa10.39□□□□□ -0.75
HMGCL-208ENST00000509389 FAM3BP58499 235 aaPredicted RBP10.39□□□□□ -0.75
HMGCL-208ENST00000509389 Q6ZQT7 251 aa10.39□□□□□ -0.75
HMGCL-208ENST00000509389 NUP35Q8NFH5 326 aa10.39□□□□□ -0.75
HMGCL-208ENST00000509389 C20orf144Q9BQM9 153 aa10.39□□□□□ -0.75
HMGCL-208ENST00000509389 NDUFAF3Q9BU61 184 aa10.39□□□□□ -0.75
HMGCL-208ENST00000509389 CNFNQ9BYD5 112 aa10.39□□□□□ -0.75
HMGCL-208ENST00000509389 DNAH17Q9UFH2 4485 aa10.39□□□□□ -0.75
HMGCL-208ENST00000509389 FAT2Q9NYQ8 4349 aa10.39□□□□□ -0.75
HMGCL-208ENST00000509389 A0A1B0GXF2 115 aa10.39□□□□□ -0.75
HMGCL-208ENST00000509389 TMEM189A5PLL7 270 aa10.39□□□□□ -0.75
HMGCL-208ENST00000509389 SMIM9A6NGZ8 99 aa10.39□□□□□ -0.75
HMGCL-208ENST00000509389 M0R2Z0 102 aa10.39□□□□□ -0.75
HMGCL-208ENST00000509389 P0DMU3 169 aa10.39□□□□□ -0.75
HMGCL-208ENST00000509389 FAM231AP0DMU4 169 aa10.39□□□□□ -0.75
HMGCL-208ENST00000509389 FAM231CP0DMU5 169 aa10.39□□□□□ -0.75
HMGCL-208ENST00000509389 RAB5AP20339 215 aa10.39□□□□□ -0.75
HMGCL-208ENST00000509389 EMP1P54849 157 aa10.39□□□□□ -0.75
HMGCL-208ENST00000509389 SPINK13Q1W4C9 94 aa10.39□□□□□ -0.75
HMGCL-208ENST00000509389 LINC00336Q6ZUF6 198 aa10.39□□□□□ -0.75
HMGCL-208ENST00000509389 ATP5L2Q7Z4Y8 100 aa10.39□□□□□ -0.75
HMGCL-208ENST00000509389 POM121L12Q8N7R1 296 aa10.39□□□□□ -0.75
HMGCL-208ENST00000509389 FAM210BQ96KR6 192 aa10.39□□□□□ -0.75
HMGCL-208ENST00000509389 DNAH2Q9P225 4427 aa10.38□□□□□ -0.75
HMGCL-208ENST00000509389 IGHV3OR16-12A0A075B7B8 117 aa10.38□□□□□ -0.75
HMGCL-208ENST00000509389 XKRY2A2RUG3 117 aa10.38□□□□□ -0.75
HMGCL-208ENST00000509389 SPART-AS1P0CW21 52 aa10.38□□□□□ -0.75
HMGCL-208ENST00000509389 MED14OSP0DP75 135 aa10.38□□□□□ -0.75
HMGCL-208ENST00000509389 RASL11AQ6T310 242 aa10.38□□□□□ -0.75
HMGCL-208ENST00000509389 LINC00467Q9BRT7 94 aa10.38□□□□□ -0.75
HMGCL-208ENST00000509389 PHOX2AO14813 284 aa10.37□□□□□ -0.75
HMGCL-208ENST00000509389 SNAI2O43623 268 aa10.37□□□□□ -0.75
HMGCL-208ENST00000509389 GZMBP10144 247 aa10.37□□□□□ -0.75
HMGCL-208ENST00000509389 TCL1AP56279 114 aa10.37□□□□□ -0.75
HMGCL-208ENST00000509389 GATD1Q8NB37 220 aa10.37□□□□□ -0.75
HMGCL-208ENST00000509389 SSBP4Q9BWG4 385 aaPredicted RBP10.37□□□□□ -0.75
HMGCL-208ENST00000509389 A0A1B0GVY2 172 aa10.36□□□□□ -0.75
HMGCL-208ENST00000509389 ORM1P02763 201 aa10.36□□□□□ -0.75
HMGCL-208ENST00000509389 OR5AL1P0C617 328 aa10.36□□□□□ -0.75
HMGCL-208ENST00000509389 RNASE4P34096 147 aaKnown RBP10.36□□□□□ -0.75
HMGCL-208ENST00000509389 DKK2Q9UBU2 259 aa10.36□□□□□ -0.75
HMGCL-208ENST00000509389 MUC4Q99102 2169 aa10.36□□□□□ -0.75
HMGCL-208ENST00000509389 TRAV12-2A0A075B6T6 113 aa10.35□□□□□ -0.75
HMGCL-208ENST00000509389 M0R2N4 97 aa10.35□□□□□ -0.75
HMGCL-208ENST00000509389 ANXA2RQ3ZCQ2 193 aa10.35□□□□□ -0.75
HMGCL-208ENST00000509389 COX19Q49B96 90 aa10.35□□□□□ -0.75
HMGCL-208ENST00000509389 FAM222AQ5U5X8 452 aa10.35□□□□□ -0.75
HMGCL-208ENST00000509389 C1orf158Q8N1D5 194 aa10.35□□□□□ -0.75
HMGCL-208ENST00000509389 KCNS1Q96KK3 526 aa10.35□□□□□ -0.75
HMGCL-208ENST00000509389 SCRT2Q9NQ03 307 aa10.35□□□□□ -0.75
HMGCL-208ENST00000509389 TRAV12-3A0A0B4J271 114 aa10.34□□□□□ -0.75
HMGCL-208ENST00000509389 J3KRW8 73 aa10.34□□□□□ -0.75
HMGCL-208ENST00000509389 SREK1IP1Q8N9Q2 155 aaPredicted RBP10.34□□□□□ -0.75
HMGCL-208ENST00000509389 FER1L6-AS1Q8NA97 138 aa10.34□□□□□ -0.75
HMGCL-208ENST00000509389 GOLT1BQ9Y3E0 138 aa10.34□□□□□ -0.75
HMGCL-208ENST00000509389 TMSB15BA0A087X1C1 80 aa10.33□□□□□ -0.76
HMGCL-208ENST00000509389 TEX48A0A1B0GUV7 120 aa10.33□□□□□ -0.76
HMGCL-208ENST00000509389 A0A1B0GW15 77 aa10.33□□□□□ -0.76
HMGCL-208ENST00000509389 F2Z2F3 143 aa10.33□□□□□ -0.76
HMGCL-208ENST00000509389 RTL8CO15255 209 aa10.33□□□□□ -0.76
HMGCL-208ENST00000509389 NXPH4O95158 308 aa10.33□□□□□ -0.76
HMGCL-208ENST00000509389 INSP01308 110 aa10.33□□□□□ -0.76
HMGCL-208ENST00000509389 RNASE3P12724 160 aaKnown RBP10.33□□□□□ -0.76
HMGCL-208ENST00000509389 WDR73Q6P4I2 378 aa10.33□□□□□ -0.76
HMGCL-208ENST00000509389 GNB1LQ9BYB4 327 aa10.33□□□□□ -0.76
HMGCL-208ENST00000509389 TP53TG3Q9ULZ0 132 aa10.33□□□□□ -0.76
HMGCL-208ENST00000509389 IGHV1OR15-1A0A075B7D0 117 aa10.32□□□□□ -0.76
HMGCL-208ENST00000509389 A0A1B0GUT8 65 aa10.32□□□□□ -0.76
HMGCL-208ENST00000509389 PRSS29PA6NIE9 313 aa10.32□□□□□ -0.76
HMGCL-208ENST00000509389 MT-ND6P03923 174 aa10.32□□□□□ -0.76
HMGCL-208ENST00000509389 ARMS2P0C7Q2 107 aa10.32□□□□□ -0.76
HMGCL-208ENST00000509389 LGALS9BQ3B8N2 356 aa10.32□□□□□ -0.76
HMGCL-208ENST00000509389 LYZL1Q6UWQ5 148 aa10.32□□□□□ -0.76
HMGCL-208ENST00000509389 TMEM136Q6ZRR5 245 aa10.32□□□□□ -0.76
HMGCL-208ENST00000509389 TMEM256Q8N2U0 113 aa10.32□□□□□ -0.76
HMGCL-208ENST00000509389 PGLYRP4Q96LB8 373 aa10.32□□□□□ -0.76
HMGCL-208ENST00000509389 PKHD1P08F94 4074 aa10.32□□□□□ -0.76
HMGCL-208ENST00000509389 HTN3P15516 51 aa10.31□□□□□ -0.76
HMGCL-208ENST00000509389 HBBP68871 147 aa10.31□□□□□ -0.76
HMGCL-208ENST00000509389 RRN3P1Q2M238 152 aa10.31□□□□□ -0.76
HMGCL-208ENST00000509389 MUC21Q5SSG8 566 aa10.31□□□□□ -0.76
HMGCL-208ENST00000509389 MRPL54Q6P161 138 aaKnown RBP10.31□□□□□ -0.76
HMGCL-208ENST00000509389 FAM159AQ6UWV7 190 aa10.31□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms