RNA–Protein interactions for RNA: ENST00000509162.1

TOPBP1-207, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 2

Gene TOPBP1, Length 811 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-207ENST00000509162 TRGV11A0A075B6L2 103 aa5.01□□□□□ -1.61
TOPBP1-207ENST00000509162 IGKV3D-20A0A0C4DH25 116 aa5.01□□□□□ -1.61
TOPBP1-207ENST00000509162 CBY3A6NI87 242 aa5.01□□□□□ -1.61
TOPBP1-207ENST00000509162 GNRH2O43555 120 aa5.01□□□□□ -1.61
TOPBP1-207ENST00000509162 PFDN1O60925 122 aa5.01□□□□□ -1.61
TOPBP1-207ENST00000509162 RNASE3P12724 160 aaKnown RBP5.01□□□□□ -1.61
TOPBP1-207ENST00000509162 CSN1S1P47710 185 aa5.01□□□□□ -1.61
TOPBP1-207ENST00000509162 SULT1A2P50226 295 aa5.01□□□□□ -1.61
TOPBP1-207ENST00000509162 FLI1Q01543 452 aaPredicted RBP5.01□□□□□ -1.61
TOPBP1-207ENST00000509162 IBA57Q5T440 356 aaKnown RBP5.01□□□□□ -1.61
TOPBP1-207ENST00000509162 LGALS9CQ6DKI2 356 aa5.01□□□□□ -1.61
TOPBP1-207ENST00000509162 ZNF493Q6ZR52 646 aa5.01□□□□□ -1.61
TOPBP1-207ENST00000509162 COX8CQ7Z4L0 72 aa5.01□□□□□ -1.61
TOPBP1-207ENST00000509162 PRNTQ86SH4 94 aa5.01□□□□□ -1.61
TOPBP1-207ENST00000509162 CMTM2Q8TAZ6 248 aa5.01□□□□□ -1.61
TOPBP1-207ENST00000509162 TREM1Q9NP99 234 aa5.01□□□□□ -1.61
TOPBP1-207ENST00000509162 NAGKQ9UJ70 344 aa5.01□□□□□ -1.61
TOPBP1-207ENST00000509162 KLK5Q9Y337 293 aaPredicted RBP5.01□□□□□ -1.61
TOPBP1-207ENST00000509162 TIMM8BQ9Y5J9 83 aaPredicted RBP5.01□□□□□ -1.61
TOPBP1-207ENST00000509162 TEX48A0A1B0GUV7 120 aa5□□□□□ -1.61
TOPBP1-207ENST00000509162 UMAD1C9J7I0 102 aa5□□□□□ -1.61
TOPBP1-207ENST00000509162 GCGP01275 180 aa5□□□□□ -1.61
TOPBP1-207ENST00000509162 LTAP01374 205 aa5□□□□□ -1.61
TOPBP1-207ENST00000509162 IGHV3-53P01767 116 aa5□□□□□ -1.61
TOPBP1-207ENST00000509162 TMEM183BQ1AE95 376 aa5□□□□□ -1.61
TOPBP1-207ENST00000509162 ZFP69Q49AA0 526 aa5□□□□□ -1.61
TOPBP1-207ENST00000509162 SLC51BQ86UW2 128 aa5□□□□□ -1.61
TOPBP1-207ENST00000509162 TMEM183AQ8IXX5 376 aa5□□□□□ -1.61
TOPBP1-207ENST00000509162 NHLRC2Q8NBF2 726 aa5□□□□□ -1.61
TOPBP1-207ENST00000509162 ZNF680Q8NEM1 530 aa5□□□□□ -1.61
TOPBP1-207ENST00000509162 SFT2D1Q8WV19 159 aa5□□□□□ -1.61
TOPBP1-207ENST00000509162 C11orf52Q96A22 123 aa5□□□□□ -1.61
TOPBP1-207ENST00000509162 C9orf85Q96MD7 179 aa5□□□□□ -1.61
TOPBP1-207ENST00000509162 C18orf15Q96N68 181 aa5□□□□□ -1.61
TOPBP1-207ENST00000509162 KRTAP1-5Q9BYS1 174 aa5□□□□□ -1.61
TOPBP1-207ENST00000509162 FAT1Q14517 4588 aa4.99□□□□□ -1.61
TOPBP1-207ENST00000509162 TRBV20OR9-2A0A075B6H5 130 aa4.99□□□□□ -1.61
TOPBP1-207ENST00000509162 TRGV1A0A0A0MS02 117 aa4.99□□□□□ -1.61
TOPBP1-207ENST00000509162 TRAV1-1A0A0B4J248 108 aa4.99□□□□□ -1.61
TOPBP1-207ENST00000509162 TRBV6-1A0A0K0K1D8 114 aa4.99□□□□□ -1.61
TOPBP1-207ENST00000509162 SERTM2A0A1B0GWG4 89 aa4.99□□□□□ -1.61
TOPBP1-207ENST00000509162 SH2D1AO60880 128 aa4.99□□□□□ -1.61
TOPBP1-207ENST00000509162 IGLV2-8P01709 118 aa4.99□□□□□ -1.61
TOPBP1-207ENST00000509162 SFTA3P0C7M3 94 aa4.99□□□□□ -1.61
TOPBP1-207ENST00000509162 ZNF415Q09FC8 603 aa4.99□□□□□ -1.61
TOPBP1-207ENST00000509162 ALKAL2Q6UX46 152 aa4.99□□□□□ -1.61
TOPBP1-207ENST00000509162 ZNF479Q96JC4 524 aa4.99□□□□□ -1.61
TOPBP1-207ENST00000509162 MLST8Q9BVC4 326 aa4.99□□□□□ -1.61
TOPBP1-207ENST00000509162 CTDSP1Q9GZU7 261 aa4.99□□□□□ -1.61
TOPBP1-207ENST00000509162 TRAV26-1A0A087WT03 109 aa4.98□□□□□ -1.61
TOPBP1-207ENST00000509162 TRAV21A0A0B4J279 112 aa4.98□□□□□ -1.61
TOPBP1-207ENST00000509162 A0A0J9YY99 117 aa4.98□□□□□ -1.61
TOPBP1-207ENST00000509162 LOC100131303A0A0U1RQF7 123 aa4.98□□□□□ -1.61
TOPBP1-207ENST00000509162 SNURFLB1AK76 121 aa4.98□□□□□ -1.61
TOPBP1-207ENST00000509162 F5H768 121 aa4.98□□□□□ -1.61
TOPBP1-207ENST00000509162 ATP5G1P05496 136 aa4.98□□□□□ -1.61
TOPBP1-207ENST00000509162 PFN1P07737 140 aaKnown RBP4.98□□□□□ -1.61
TOPBP1-207ENST00000509162 RPL19P84098 196 aaKnown RBP4.98□□□□□ -1.61
TOPBP1-207ENST00000509162 FHL2Q14192 279 aa4.98□□□□□ -1.61
TOPBP1-207ENST00000509162 PCNPQ8WW12 178 aaKnown RBP4.98□□□□□ -1.61
TOPBP1-207ENST00000509162 HIST1H2BAQ96A08 127 aa4.98□□□□□ -1.61
TOPBP1-207ENST00000509162 NDUFAF3Q9BU61 184 aa4.98□□□□□ -1.61
TOPBP1-207ENST00000509162 GNG13Q9P2W3 67 aa4.98□□□□□ -1.61
TOPBP1-207ENST00000509162 A0A096LPF7 62 aa4.97□□□□□ -1.61
TOPBP1-207ENST00000509162 IFNA7P01567 189 aa4.97□□□□□ -1.61
TOPBP1-207ENST00000509162 BCL2P10415 239 aa4.97□□□□□ -1.61
TOPBP1-207ENST00000509162 AKR1C3P42330 323 aa4.97□□□□□ -1.61
TOPBP1-207ENST00000509162 TCTAP57738 103 aa4.97□□□□□ -1.61
TOPBP1-207ENST00000509162 SUMO2P61956 95 aaKnown RBP4.97□□□□□ -1.61
TOPBP1-207ENST00000509162 SMUG1Q53HV7 270 aa4.97□□□□□ -1.61
TOPBP1-207ENST00000509162 CST9LP1Q5W188 147 aa4.97□□□□□ -1.61
TOPBP1-207ENST00000509162 Q6ZR54 194 aa4.97□□□□□ -1.61
TOPBP1-207ENST00000509162 ZNRF2Q8NHG8 242 aa4.97□□□□□ -1.61
TOPBP1-207ENST00000509162 LYPD6BQ8NI32 183 aa4.97□□□□□ -1.61
TOPBP1-207ENST00000509162 JPT2Q9H910 190 aa4.97□□□□□ -1.61
TOPBP1-207ENST00000509162 Q9UF83 564 aa4.97□□□□□ -1.61
TOPBP1-207ENST00000509162 LINC00588Q9Y4M8 146 aa4.97□□□□□ -1.61
TOPBP1-207ENST00000509162 RAB19A4D1S5 217 aa4.96□□□□□ -1.62
TOPBP1-207ENST00000509162 GRIFINA4D1Z8 144 aa4.96□□□□□ -1.62
TOPBP1-207ENST00000509162 KRBOX1C9JBD0 128 aa4.96□□□□□ -1.62
TOPBP1-207ENST00000509162 TEX46H3BTG2 121 aa4.96□□□□□ -1.62
TOPBP1-207ENST00000509162 H3BVH4 76 aa4.96□□□□□ -1.62
TOPBP1-207ENST00000509162 M0R036 132 aa4.96□□□□□ -1.62
TOPBP1-207ENST00000509162 RTL8CO15255 209 aa4.96□□□□□ -1.62
TOPBP1-207ENST00000509162 LINC00694P0DN24 101 aa4.96□□□□□ -1.62
TOPBP1-207ENST00000509162 RPL35P42766 123 aaKnown RBP4.96□□□□□ -1.62
TOPBP1-207ENST00000509162 EIF5AP63241 154 aaKnown RBP4.96□□□□□ -1.62
TOPBP1-207ENST00000509162 ZNF674Q2M3X9 581 aa4.96□□□□□ -1.62
TOPBP1-207ENST00000509162 ZNF506Q5JVG8 444 aa4.96□□□□□ -1.62
TOPBP1-207ENST00000509162 UFSP1Q6NVU6 142 aa4.96□□□□□ -1.62
TOPBP1-207ENST00000509162 RASL10AQ92737 203 aa4.96□□□□□ -1.62
TOPBP1-207ENST00000509162 FMC1Q96HJ9 113 aa4.96□□□□□ -1.62
TOPBP1-207ENST00000509162 FAM210BQ96KR6 192 aa4.96□□□□□ -1.62
TOPBP1-207ENST00000509162 TCEAL7Q9BRU2 100 aa4.96□□□□□ -1.62
TOPBP1-207ENST00000509162 SAMD10Q9BYL1 202 aa4.96□□□□□ -1.62
TOPBP1-207ENST00000509162 SDF2L1Q9HCN8 221 aa4.96□□□□□ -1.62
TOPBP1-207ENST00000509162 SCRT2Q9NQ03 307 aa4.96□□□□□ -1.62
TOPBP1-207ENST00000509162 IGLV2-18A0A075B6J9 118 aa4.95□□□□□ -1.62
TOPBP1-207ENST00000509162 TMSB15BA0A087X1C1 80 aa4.95□□□□□ -1.62
TOPBP1-207ENST00000509162 K7EN84 100 aa4.95□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms