RNA–Protein interactions for RNA: ENST00000509102.5

UBE3D-207, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 1 (best)

Gene UBE3D, Length 1,246 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-207ENST00000509102 B4DEV8 164 aa12.78□□□□□ -0.36
UBE3D-207ENST00000509102 K7EP13 123 aa12.78□□□□□ -0.36
UBE3D-207ENST00000509102 RS1O15537 224 aa12.78□□□□□ -0.36
UBE3D-207ENST00000509102 TPT1P13693 172 aaKnown RBP12.78□□□□□ -0.36
UBE3D-207ENST00000509102 AKR1C3P42330 323 aa12.78□□□□□ -0.36
UBE3D-207ENST00000509102 RHOHQ15669 191 aa12.78□□□□□ -0.36
UBE3D-207ENST00000509102 ZNF506Q5JVG8 444 aa12.78□□□□□ -0.36
UBE3D-207ENST00000509102 CFAP126Q5VTH2 177 aa12.78□□□□□ -0.36
UBE3D-207ENST00000509102 TRBV6-4A0A1B0GX49 114 aa12.77□□□□□ -0.37
UBE3D-207ENST00000509102 C16orf90A8MZG2 172 aa12.77□□□□□ -0.37
UBE3D-207ENST00000509102 RNASE3P12724 160 aaKnown RBP12.77□□□□□ -0.37
UBE3D-207ENST00000509102 EVI2AP22794 236 aa12.77□□□□□ -0.37
UBE3D-207ENST00000509102 LINC00315P59091 139 aa12.77□□□□□ -0.37
UBE3D-207ENST00000509102 FAM162BQ5T6X4 162 aa12.77□□□□□ -0.37
UBE3D-207ENST00000509102 NFE4Q86UQ8 179 aa12.77□□□□□ -0.37
UBE3D-207ENST00000509102 MBD3L1Q8WWY6 194 aa12.77□□□□□ -0.37
UBE3D-207ENST00000509102 PKD1P98161 4303 aa12.76□□□□□ -0.37
UBE3D-207ENST00000509102 IGKV3D-20A0A0C4DH25 116 aa12.76□□□□□ -0.37
UBE3D-207ENST00000509102 PGPEP1LA6NFU8 196 aa12.76□□□□□ -0.37
UBE3D-207ENST00000509102 A8MWV9 139 aa12.76□□□□□ -0.37
UBE3D-207ENST00000509102 PAGE4O60829 102 aa12.76□□□□□ -0.37
UBE3D-207ENST00000509102 S100A9P06702 114 aaKnown RBP12.76□□□□□ -0.37
UBE3D-207ENST00000509102 H2AFB1P0C5Y9 115 aa12.76□□□□□ -0.37
UBE3D-207ENST00000509102 MGST1P10620 155 aaKnown RBP12.76□□□□□ -0.37
UBE3D-207ENST00000509102 LGALSLQ3ZCW2 172 aaPredicted RBP12.76□□□□□ -0.37
UBE3D-207ENST00000509102 PIK3CD-AS1Q5SR53 167 aa12.76□□□□□ -0.37
UBE3D-207ENST00000509102 EIF5AL1Q6IS14 154 aaKnown RBP12.76□□□□□ -0.37
UBE3D-207ENST00000509102 SLC25A29Q8N8R3 303 aa12.76□□□□□ -0.37
UBE3D-207ENST00000509102 SYT8Q8NBV8 401 aa12.76□□□□□ -0.37
UBE3D-207ENST00000509102 ZC2HC1AQ96GY0 325 aa12.76□□□□□ -0.37
UBE3D-207ENST00000509102 IGHV3-73A0A0B4J1V6 119 aa12.75□□□□□ -0.37
UBE3D-207ENST00000509102 TRBV6-1A0A0K0K1D8 114 aa12.75□□□□□ -0.37
UBE3D-207ENST00000509102 A0A1B0GV50 99 aa12.75□□□□□ -0.37
UBE3D-207ENST00000509102 TMUB2Q71RG4 321 aa12.75□□□□□ -0.37
UBE3D-207ENST00000509102 COX8CQ7Z4L0 72 aa12.75□□□□□ -0.37
UBE3D-207ENST00000509102 ZNF575Q86XF7 245 aa12.75□□□□□ -0.37
UBE3D-207ENST00000509102 IL36BQ9NZH7 164 aa12.75□□□□□ -0.37
UBE3D-207ENST00000509102 LOC100131303A0A0U1RQF7 123 aa12.74□□□□□ -0.37
UBE3D-207ENST00000509102 M0R036 132 aa12.74□□□□□ -0.37
UBE3D-207ENST00000509102 EREGO14944 169 aa12.74□□□□□ -0.37
UBE3D-207ENST00000509102 SH2D1AO60880 128 aa12.74□□□□□ -0.37
UBE3D-207ENST00000509102 LTAP01374 205 aa12.74□□□□□ -0.37
UBE3D-207ENST00000509102 TIRAPP58753 221 aa12.74□□□□□ -0.37
UBE3D-207ENST00000509102 C10orf126Q8N4M7 172 aa12.74□□□□□ -0.37
UBE3D-207ENST00000509102 KIAA1109Q2LD37 5005 aa12.73□□□□□ -0.37
UBE3D-207ENST00000509102 HERC2O95714 4834 aa12.73□□□□□ -0.37
UBE3D-207ENST00000509102 TEX46H3BTG2 121 aa12.73□□□□□ -0.37
UBE3D-207ENST00000509102 H3BVH4 76 aa12.73□□□□□ -0.37
UBE3D-207ENST00000509102 ZFP2Q6ZN57 461 aa12.73□□□□□ -0.37
UBE3D-207ENST00000509102 WFDC10BQ8IUB3 73 aa12.73□□□□□ -0.37
UBE3D-207ENST00000509102 TRAV8-6A0A0B4J262 113 aa12.72□□□□□ -0.37
UBE3D-207ENST00000509102 KRBOX1C9JBD0 128 aa12.72□□□□□ -0.37
UBE3D-207ENST00000509102 DNAH10OSP0CZ25 163 aa12.72□□□□□ -0.37
UBE3D-207ENST00000509102 RAB5CP51148 216 aa12.72□□□□□ -0.37
UBE3D-207ENST00000509102 PHLDA3Q9Y5J5 127 aa12.72□□□□□ -0.37
UBE3D-207ENST00000509102 DNAH11Q96DT5 4516 aa12.71□□□□□ -0.37
UBE3D-207ENST00000509102 CRIP1P50238 77 aa12.71□□□□□ -0.37
UBE3D-207ENST00000509102 ZNF674Q2M3X9 581 aa12.71□□□□□ -0.37
UBE3D-207ENST00000509102 DNLZQ5SXM8 178 aa12.71□□□□□ -0.37
UBE3D-207ENST00000509102 SPATA12Q7Z6I5 190 aa12.71□□□□□ -0.37
UBE3D-207ENST00000509102 PARLQ9H300 379 aa12.71□□□□□ -0.37
UBE3D-207ENST00000509102 RHODO00212 210 aa12.7□□□□□ -0.38
UBE3D-207ENST00000509102 CRYGDP07320 174 aa12.7□□□□□ -0.38
UBE3D-207ENST00000509102 ARMS2P0C7Q2 107 aa12.7□□□□□ -0.38
UBE3D-207ENST00000509102 ERVFC1-1P60608 527 aa12.7□□□□□ -0.38
UBE3D-207ENST00000509102 LINC01559Q495D7 138 aa12.7□□□□□ -0.38
UBE3D-207ENST00000509102 OR10J3Q5JRS4 329 aa12.7□□□□□ -0.38
UBE3D-207ENST00000509102 MANBALQ9NQG1 85 aa12.7□□□□□ -0.38
UBE3D-207ENST00000509102 MSRB1Q9NZV6 116 aa12.7□□□□□ -0.38
UBE3D-207ENST00000509102 TMSB15BA0A087X1C1 80 aa12.69□□□□□ -0.38
UBE3D-207ENST00000509102 IGHV3-38A0A0C4DH36 116 aa12.69□□□□□ -0.38
UBE3D-207ENST00000509102 SCO2A0A1W2PP80 73 aa12.69□□□□□ -0.38
UBE3D-207ENST00000509102 GRIFINA4D1Z8 144 aa12.69□□□□□ -0.38
UBE3D-207ENST00000509102 ATP6V0E2Q8NHE4 81 aa12.69□□□□□ -0.38
UBE3D-207ENST00000509102 DYNC1H1Q14204 4646 aaKnown RBP12.68□□□□□ -0.38
UBE3D-207ENST00000509102 BAGE2Q86Y30 109 aa12.68□□□□□ -0.38
UBE3D-207ENST00000509102 TCTE3Q8IZS6 198 aa12.68□□□□□ -0.38
UBE3D-207ENST00000509102 ZFP82Q8N141 532 aa12.68□□□□□ -0.38
UBE3D-207ENST00000509102 GTSF1LQ9H1H1 148 aa12.68□□□□□ -0.38
UBE3D-207ENST00000509102 LELP1Q5T871 98 aa12.67□□□□□ -0.38
UBE3D-207ENST00000509102 FAM74A4Q5TZK3 123 aa12.67□□□□□ -0.38
UBE3D-207ENST00000509102 Q6ZRN7 208 aaPredicted RBP12.67□□□□□ -0.38
UBE3D-207ENST00000509102 GNG13Q9P2W3 67 aa12.67□□□□□ -0.38
UBE3D-207ENST00000509102 M0R381 172 aa12.66□□□□□ -0.38
UBE3D-207ENST00000509102 TRAV1-1A0A0B4J248 108 aa12.65□□□□□ -0.38
UBE3D-207ENST00000509102 GAGE12JA6NER3 117 aa12.65□□□□□ -0.38
UBE3D-207ENST00000509102 GAGE1Q13065 139 aa12.65□□□□□ -0.38
UBE3D-207ENST00000509102 GAGE4Q13068 117 aa12.65□□□□□ -0.38
UBE3D-207ENST00000509102 GAGE5Q13069 117 aa12.65□□□□□ -0.38
UBE3D-207ENST00000509102 GAGE13Q4V321 117 aa12.65□□□□□ -0.38
UBE3D-207ENST00000509102 LINC01556Q5JQF7 62 aa12.65□□□□□ -0.38
UBE3D-207ENST00000509102 CDK2AP2O75956 126 aa12.64□□□□□ -0.39
UBE3D-207ENST00000509102 IFNA1P01562 189 aa12.64□□□□□ -0.39
UBE3D-207ENST00000509102 PRR27Q6MZM9 219 aa12.64□□□□□ -0.39
UBE3D-207ENST00000509102 SLC51BQ86UW2 128 aa12.64□□□□□ -0.39
UBE3D-207ENST00000509102 SFRP2Q96HF1 295 aa12.64□□□□□ -0.39
UBE3D-207ENST00000509102 JPT2Q9H910 190 aa12.64□□□□□ -0.39
UBE3D-207ENST00000509102 SCRT2Q9NQ03 307 aa12.64□□□□□ -0.39
UBE3D-207ENST00000509102 TNFRSF18Q9Y5U5 241 aa12.64□□□□□ -0.39
UBE3D-207ENST00000509102 A0A087WWC5 75 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms