RNA–Protein interactions for RNA: ENST00000508583.5

NUP54-207, Transcript of nucleoporin 54, humanhuman

TSL 5

Gene NUP54, Length 521 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-207ENST00000508583 TMA7Q9Y2S6 64 aaKnown RBP6.46□□□□□ -1.38
NUP54-207ENST00000508583 MUC4Q99102 2169 aa6.45□□□□□ -1.38
NUP54-207ENST00000508583 KMT2CQ8NEZ4 4911 aaKnown RBP6.45□□□□□ -1.38
NUP54-207ENST00000508583 IGKV3D-20A0A0C4DH25 116 aa6.45□□□□□ -1.38
NUP54-207ENST00000508583 TRGV4A0A0C4DH28 118 aa6.45□□□□□ -1.38
NUP54-207ENST00000508583 LCE6AA0A183 80 aa6.45□□□□□ -1.38
NUP54-207ENST00000508583 P01737 135 aa6.45□□□□□ -1.38
NUP54-207ENST00000508583 CRIP1P50238 77 aa6.45□□□□□ -1.38
NUP54-207ENST00000508583 CEBPGP53567 150 aa6.45□□□□□ -1.38
NUP54-207ENST00000508583 FAM74A3Q4VXF1 159 aa6.45□□□□□ -1.38
NUP54-207ENST00000508583 LGALS9CQ6DKI2 356 aa6.45□□□□□ -1.38
NUP54-207ENST00000508583 TMEM88Q6PEY1 159 aa6.45□□□□□ -1.38
NUP54-207ENST00000508583 OR4C5Q8NGB2 326 aa6.45□□□□□ -1.38
NUP54-207ENST00000508583 PARLQ9H300 379 aa6.45□□□□□ -1.38
NUP54-207ENST00000508583 C11orf21Q9P2W6 132 aa6.45□□□□□ -1.38
NUP54-207ENST00000508583 PHLDA3Q9Y5J5 127 aa6.45□□□□□ -1.38
NUP54-207ENST00000508583 LY96Q9Y6Y9 160 aa6.45□□□□□ -1.38
NUP54-207ENST00000508583 RAB19A4D1S5 217 aa6.44□□□□□ -1.38
NUP54-207ENST00000508583 A8MWV9 139 aa6.44□□□□□ -1.38
NUP54-207ENST00000508583 H3BVH4 76 aa6.44□□□□□ -1.38
NUP54-207ENST00000508583 RNASE3P12724 160 aaKnown RBP6.44□□□□□ -1.38
NUP54-207ENST00000508583 ZFP82Q8N141 532 aa6.44□□□□□ -1.38
NUP54-207ENST00000508583 LINC00476Q8WZB0 136 aa6.44□□□□□ -1.38
NUP54-207ENST00000508583 SMIM7Q9BQ49 75 aa6.44□□□□□ -1.38
NUP54-207ENST00000508583 PRO0255Q9UI72 69 aa6.44□□□□□ -1.38
NUP54-207ENST00000508583 APLNQ9ULZ1 77 aa6.44□□□□□ -1.38
NUP54-207ENST00000508583 TRAV26-1A0A087WT03 109 aa6.43□□□□□ -1.38
NUP54-207ENST00000508583 TMSB15BA0A087X1C1 80 aa6.43□□□□□ -1.38
NUP54-207ENST00000508583 ZNF727A8MUV8 499 aa6.43□□□□□ -1.38
NUP54-207ENST00000508583 RHODO00212 210 aa6.43□□□□□ -1.38
NUP54-207ENST00000508583 LY6G6CO95867 125 aa6.43□□□□□ -1.38
NUP54-207ENST00000508583 ARMS2P0C7Q2 107 aa6.43□□□□□ -1.38
NUP54-207ENST00000508583 FAM3BP58499 235 aaPredicted RBP6.43□□□□□ -1.38
NUP54-207ENST00000508583 PCNPQ8WW12 178 aaKnown RBP6.43□□□□□ -1.38
NUP54-207ENST00000508583 TRBV20OR9-2A0A075B6H5 130 aa6.42□□□□□ -1.38
NUP54-207ENST00000508583 A0A1W2PPQ1 181 aa6.42□□□□□ -1.38
NUP54-207ENST00000508583 F2Z2F3 143 aa6.42□□□□□ -1.38
NUP54-207ENST00000508583 PAX4O43316 350 aa6.42□□□□□ -1.38
NUP54-207ENST00000508583 NUDT3O95989 172 aa6.42□□□□□ -1.38
NUP54-207ENST00000508583 IGLV2-8P01709 118 aa6.42□□□□□ -1.38
NUP54-207ENST00000508583 IGHV3-53P01767 116 aa6.42□□□□□ -1.38
NUP54-207ENST00000508583 SRP19P09132 144 aaKnown RBP6.42□□□□□ -1.38
NUP54-207ENST00000508583 OR5AL1P0C617 328 aa6.42□□□□□ -1.38
NUP54-207ENST00000508583 CCL18P55774 89 aa6.42□□□□□ -1.38
NUP54-207ENST00000508583 C4orf48Q5BLP8 95 aa6.42□□□□□ -1.38
NUP54-207ENST00000508583 ZFP2Q6ZN57 461 aa6.42□□□□□ -1.38
NUP54-207ENST00000508583 SH2D6Q7Z4S9 175 aa6.42□□□□□ -1.38
NUP54-207ENST00000508583 UBE2DNLQ8IWF7 75 aa6.42□□□□□ -1.38
NUP54-207ENST00000508583 OR2D3Q8NGH3 330 aa6.42□□□□□ -1.38
NUP54-207ENST00000508583 PRADC1Q9BSG0 188 aa6.42□□□□□ -1.38
NUP54-207ENST00000508583 SCRT2Q9NQ03 307 aa6.42□□□□□ -1.38
NUP54-207ENST00000508583 HHLA3Q9XRX5 114 aa6.42□□□□□ -1.38
NUP54-207ENST00000508583 GRIFINA4D1Z8 144 aa6.41□□□□□ -1.38
NUP54-207ENST00000508583 C19orf71A6NCJ1 209 aa6.41□□□□□ -1.38
NUP54-207ENST00000508583 RS1O15537 224 aa6.41□□□□□ -1.38
NUP54-207ENST00000508583 HOXA5P20719 270 aa6.41□□□□□ -1.38
NUP54-207ENST00000508583 ERVFC1-1P60608 527 aa6.41□□□□□ -1.38
NUP54-207ENST00000508583 MRPL23Q16540 153 aaKnown RBP6.41□□□□□ -1.38
NUP54-207ENST00000508583 RNF212Q495C1 297 aa6.41□□□□□ -1.38
NUP54-207ENST00000508583 CLLU1Q5K131 121 aa6.41□□□□□ -1.38
NUP54-207ENST00000508583 SPANXN1Q5VSR9 72 aa6.41□□□□□ -1.38
NUP54-207ENST00000508583 C15orf54Q8N8G6 183 aa6.41□□□□□ -1.38
NUP54-207ENST00000508583 FER1L6-AS1Q8NA97 138 aa6.41□□□□□ -1.38
NUP54-207ENST00000508583 OCC1Q8TAD7 63 aa6.41□□□□□ -1.38
NUP54-207ENST00000508583 RPP21Q9H633 154 aaKnown RBP6.41□□□□□ -1.38
NUP54-207ENST00000508583 ICOSQ9Y6W8 199 aa6.41□□□□□ -1.38
NUP54-207ENST00000508583 DYNC2H1Q8NCM8 4307 aaKnown RBP6.41□□□□□ -1.38
NUP54-207ENST00000508583 A0A0J9YY99 117 aa6.4□□□□□ -1.38
NUP54-207ENST00000508583 PGPEP1LA6NFU8 196 aa6.4□□□□□ -1.38
NUP54-207ENST00000508583 M0R381 172 aa6.4□□□□□ -1.38
NUP54-207ENST00000508583 SNAI2O43623 268 aa6.4□□□□□ -1.38
NUP54-207ENST00000508583 SFTA3P0C7M3 94 aa6.4□□□□□ -1.38
NUP54-207ENST00000508583 SMIM17P0DL12 118 aa6.4□□□□□ -1.38
NUP54-207ENST00000508583 CRYBA4P53673 196 aa6.4□□□□□ -1.38
NUP54-207ENST00000508583 CACNG7P62955 275 aa6.4□□□□□ -1.38
NUP54-207ENST00000508583 RPL19P84098 196 aaKnown RBP6.4□□□□□ -1.38
NUP54-207ENST00000508583 FHL2Q14192 279 aa6.4□□□□□ -1.38
NUP54-207ENST00000508583 RHOHQ15669 191 aa6.4□□□□□ -1.38
NUP54-207ENST00000508583 TMEM241Q24JQ0 296 aa6.4□□□□□ -1.38
NUP54-207ENST00000508583 SOHLH1Q5JUK2 328 aa6.4□□□□□ -1.38
NUP54-207ENST00000508583 CFAP126Q5VTH2 177 aa6.4□□□□□ -1.38
NUP54-207ENST00000508583 FAM231DQ6ZW35 169 aa6.4□□□□□ -1.38
NUP54-207ENST00000508583 POM121L12Q8N7R1 296 aa6.4□□□□□ -1.38
NUP54-207ENST00000508583 ZNF479Q96JC4 524 aa6.4□□□□□ -1.38
NUP54-207ENST00000508583 AP1S3Q96PC3 154 aa6.4□□□□□ -1.38
NUP54-207ENST00000508583 SSBP4Q9BWG4 385 aaPredicted RBP6.4□□□□□ -1.38
NUP54-207ENST00000508583 NAT8Q9UHE5 227 aa6.4□□□□□ -1.38
NUP54-207ENST00000508583 LYSTQ99698 3801 aa6.4□□□□□ -1.39
NUP54-207ENST00000508583 TRBV6-4A0A1B0GX49 114 aa6.39□□□□□ -1.39
NUP54-207ENST00000508583 A8MWL6 223 aa6.39□□□□□ -1.39
NUP54-207ENST00000508583 J3QL48 77 aa6.39□□□□□ -1.39
NUP54-207ENST00000508583 K7EN84 100 aa6.39□□□□□ -1.39
NUP54-207ENST00000508583 GATCO43716 136 aaKnown RBP6.39□□□□□ -1.39
NUP54-207ENST00000508583 NXPH4O95158 308 aa6.39□□□□□ -1.39
NUP54-207ENST00000508583 GATA1P15976 413 aaPredicted RBP6.39□□□□□ -1.39
NUP54-207ENST00000508583 SRIP30626 198 aa6.39□□□□□ -1.39
NUP54-207ENST00000508583 CT83Q5H943 113 aa6.39□□□□□ -1.39
NUP54-207ENST00000508583 LINC01551Q86U37 167 aa6.39□□□□□ -1.39
NUP54-207ENST00000508583 NUDT10Q8NFP7 164 aa6.39□□□□□ -1.39
NUP54-207ENST00000508583 BORCS7Q96B45 105 aa6.39□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms