RNA–Protein interactions for RNA: ENST00000508108.2

CBX3P3-201, Transcript of chromobox 3 pseudogene 3, humanhuman

BASIC

Gene CBX3P3, Length 532 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3P3-201ENST00000508108 CCNB3Q8WWL7 1395 aa1.54□□□□□ -2.16
CBX3P3-201ENST00000508108 NUPR2A6NF83 97 aa1.53□□□□□ -2.16
CBX3P3-201ENST00000508108 PCNX2A6NKB5 2137 aa1.53□□□□□ -2.16
CBX3P3-201ENST00000508108 HIGD1CA8MV81 97 aa1.53□□□□□ -2.16
CBX3P3-201ENST00000508108 PHLPP1O60346 1717 aa1.53□□□□□ -2.16
CBX3P3-201ENST00000508108 PITX3O75364 302 aa1.53□□□□□ -2.16
CBX3P3-201ENST00000508108 KLF7O75840 302 aaPredicted RBP1.53□□□□□ -2.16
CBX3P3-201ENST00000508108 IL7P13232 177 aa1.53□□□□□ -2.16
CBX3P3-201ENST00000508108 MRPL54Q6P161 138 aaKnown RBP1.53□□□□□ -2.16
CBX3P3-201ENST00000508108 SLC48A1Q6P1K1 146 aa1.53□□□□□ -2.16
CBX3P3-201ENST00000508108 KIAA1549LQ6ZVL6 1849 aa1.53□□□□□ -2.16
CBX3P3-201ENST00000508108 SVBPQ8N300 66 aa1.53□□□□□ -2.16
CBX3P3-201ENST00000508108 ZNF625Q96I27 306 aaPredicted RBP1.53□□□□□ -2.16
CBX3P3-201ENST00000508108 MRPL35Q9NZE8 188 aaKnown RBP1.53□□□□□ -2.16
CBX3P3-201ENST00000508108 MRPL36Q9P0J6 103 aaKnown RBP1.53□□□□□ -2.16
CBX3P3-201ENST00000508108 SIPA1L2Q9P2F8 1722 aaPredicted RBP1.53□□□□□ -2.16
CBX3P3-201ENST00000508108 C22orf24Q9Y442 160 aa1.53□□□□□ -2.16
CBX3P3-201ENST00000508108 KIDINS220Q9ULH0 1771 aa1.52□□□□□ -2.17
CBX3P3-201ENST00000508108 SMARCA2P51531 1590 aa1.52□□□□□ -2.17
CBX3P3-201ENST00000508108 VPS8Q8N3P4 1428 aa1.52□□□□□ -2.17
CBX3P3-201ENST00000508108 LOC100130705A0A1B0GUX0 176 aa1.52□□□□□ -2.17
CBX3P3-201ENST00000508108 CBLN1P23435 193 aa1.52□□□□□ -2.17
CBX3P3-201ENST00000508108 NPC2P61916 151 aa1.52□□□□□ -2.17
CBX3P3-201ENST00000508108 ACBD7Q8N6N7 88 aa1.52□□□□□ -2.17
CBX3P3-201ENST00000508108 TSKUQ8WUA8 353 aa1.52□□□□□ -2.17
CBX3P3-201ENST00000508108 C14orf144Q96I85 54 aa1.52□□□□□ -2.17
CBX3P3-201ENST00000508108 WFDC10AQ9H1F0 79 aa1.52□□□□□ -2.17
CBX3P3-201ENST00000508108 NDUFA12Q9UI09 145 aa1.52□□□□□ -2.17
CBX3P3-201ENST00000508108 COL5A3P25940 1745 aaPredicted RBP1.52□□□□□ -2.17
CBX3P3-201ENST00000508108 KDM6BO15054 1643 aa1.51□□□□□ -2.17
CBX3P3-201ENST00000508108 MPDZO75970 2070 aa1.51□□□□□ -2.17
CBX3P3-201ENST00000508108 MDC1Q14676 2089 aaKnown RBP1.51□□□□□ -2.17
CBX3P3-201ENST00000508108 TRAV23DV6A0A075B6W5 121 aa1.51□□□□□ -2.17
CBX3P3-201ENST00000508108 TEX49A0A1B0GTD5 131 aa1.51□□□□□ -2.17
CBX3P3-201ENST00000508108 TMEM218A2RU14 115 aa1.51□□□□□ -2.17
CBX3P3-201ENST00000508108 C9orf153Q5TBE3 101 aa1.51□□□□□ -2.17
CBX3P3-201ENST00000508108 AQP10Q96PS8 301 aa1.51□□□□□ -2.17
CBX3P3-201ENST00000508108 CXorf51AA0A1B0GTR3 108 aa1.5□□□□□ -2.17
CBX3P3-201ENST00000508108 FAM24AA6NFZ4 105 aa1.5□□□□□ -2.17
CBX3P3-201ENST00000508108 J3QKU1 62 aa1.5□□□□□ -2.17
CBX3P3-201ENST00000508108 IGLV3-1P01715 115 aa1.5□□□□□ -2.17
CBX3P3-201ENST00000508108 IGKCP01834 107 aa1.5□□□□□ -2.17
CBX3P3-201ENST00000508108 FREM3P0C091 2139 aa1.5□□□□□ -2.17
CBX3P3-201ENST00000508108 SLC25A6P12236 298 aa1.5□□□□□ -2.17
CBX3P3-201ENST00000508108 ATP5EP56381 51 aaPredicted RBP1.5□□□□□ -2.17
CBX3P3-201ENST00000508108 CATR1Q13166 79 aa1.5□□□□□ -2.17
CBX3P3-201ENST00000508108 PCOTHQ58A44 107 aa1.5□□□□□ -2.17
CBX3P3-201ENST00000508108 CSAG1Q6PB30 78 aa1.5□□□□□ -2.17
CBX3P3-201ENST00000508108 Q6ZS92 163 aa1.5□□□□□ -2.17
CBX3P3-201ENST00000508108 FCGBPQ9Y6R7 5405 aaPredicted RBP1.5□□□□□ -2.17
CBX3P3-201ENST00000508108 PZPP20742 1482 aa1.5□□□□□ -2.17
CBX3P3-201ENST00000508108 IFT140Q96RY7 1462 aa1.5□□□□□ -2.17
CBX3P3-201ENST00000508108 HEATR5BQ9P2D3 2071 aa1.49□□□□□ -2.17
CBX3P3-201ENST00000508108 CACNA1GO43497 2377 aa1.49□□□□□ -2.17
CBX3P3-201ENST00000508108 MYH1P12882 1939 aa1.49□□□□□ -2.17
CBX3P3-201ENST00000508108 TRBV10-3A0A0K0K1G6 114 aa1.49□□□□□ -2.17
CBX3P3-201ENST00000508108 TCRBV3S1A0A5B6 114 aa1.49□□□□□ -2.17
CBX3P3-201ENST00000508108 IGKV2-29A2NJV5 120 aaPredicted RBP1.49□□□□□ -2.17
CBX3P3-201ENST00000508108 CCKP06307 115 aa1.49□□□□□ -2.17
CBX3P3-201ENST00000508108 IFITM1P13164 125 aa1.49□□□□□ -2.17
CBX3P3-201ENST00000508108 RPL37AP61513 92 aaKnown RBP1.49□□□□□ -2.17
CBX3P3-201ENST00000508108 IQCJQ1A5X6 159 aa1.49□□□□□ -2.17
CBX3P3-201ENST00000508108 C9orf116Q5BN46 136 aaPredicted RBP1.49□□□□□ -2.17
CBX3P3-201ENST00000508108 CYP2G1PQ6ZSU1 146 aa1.49□□□□□ -2.17
CBX3P3-201ENST00000508108 C15orf53Q8NAA6 179 aa1.49□□□□□ -2.17
CBX3P3-201ENST00000508108 LIMD2Q9BT23 127 aa1.49□□□□□ -2.17
CBX3P3-201ENST00000508108 RTTNQ86VV8 2226 aa1.49□□□□□ -2.17
CBX3P3-201ENST00000508108 NRKQ7Z2Y5 1582 aa1.49□□□□□ -2.17
CBX3P3-201ENST00000508108 NUMA1Q14980 2115 aa1.49□□□□□ -2.17
CBX3P3-201ENST00000508108 CDK12Q9NYV4 1490 aaPredicted RBP1.49□□□□□ -2.17
CBX3P3-201ENST00000508108 LRP5O75197 1615 aa1.48□□□□□ -2.17
CBX3P3-201ENST00000508108 TRAV30A0A087WSZ9 112 aa1.48□□□□□ -2.17
CBX3P3-201ENST00000508108 SPAARA0A1B0GVQ0 90 aa1.48□□□□□ -2.17
CBX3P3-201ENST00000508108 HSD52Q0P140 79 aa1.48□□□□□ -2.17
CBX3P3-201ENST00000508108 SPRNQ5BIV9 151 aa1.48□□□□□ -2.17
CBX3P3-201ENST00000508108 ODF3Q96PU9 254 aa1.48□□□□□ -2.17
CBX3P3-201ENST00000508108 COA4Q9NYJ1 87 aa1.48□□□□□ -2.17
CBX3P3-201ENST00000508108 SCN3AQ9NY46 2000 aa1.48□□□□□ -2.17
CBX3P3-201ENST00000508108 ICE1Q9Y2F5 2266 aa1.48□□□□□ -2.17
CBX3P3-201ENST00000508108 TANC2Q9HCD6 1990 aa1.48□□□□□ -2.17
CBX3P3-201ENST00000508108 CNTLNQ9NXG0 1405 aa1.48□□□□□ -2.17
CBX3P3-201ENST00000508108 FOCADQ5VW36 1801 aa1.47□□□□□ -2.17
CBX3P3-201ENST00000508108 VWDEQ8N2E2 1590 aa1.47□□□□□ -2.17
CBX3P3-201ENST00000508108 BAHCC1Q9P281 2608 aa1.47□□□□□ -2.17
CBX3P3-201ENST00000508108 SSSCA1O60232 199 aa1.47□□□□□ -2.17
CBX3P3-201ENST00000508108 DEFB132Q7Z7B7 95 aa1.47□□□□□ -2.17
CBX3P3-201ENST00000508108 LSM10Q969L4 123 aaKnown RBP1.47□□□□□ -2.17
CBX3P3-201ENST00000508108 CUL7Q14999 1698 aa1.47□□□□□ -2.17
CBX3P3-201ENST00000508108 HELZP42694 1942 aaKnown RBP1.46□□□□□ -2.18
CBX3P3-201ENST00000508108 MICAL3Q7RTP6 2002 aa1.46□□□□□ -2.18
CBX3P3-201ENST00000508108 FN1P02751 2386 aaKnown RBP1.46□□□□□ -2.18
CBX3P3-201ENST00000508108 TRAV12-3A0A0B4J271 114 aa1.46□□□□□ -2.18
CBX3P3-201ENST00000508108 UBE2L5PA0A1B0GUS4 154 aa1.46□□□□□ -2.18
CBX3P3-201ENST00000508108 H3BQ15 152 aa1.46□□□□□ -2.18
CBX3P3-201ENST00000508108 UBE2G1P62253 170 aa1.46□□□□□ -2.18
CBX3P3-201ENST00000508108 UBE2L3P68036 154 aaKnown RBP1.46□□□□□ -2.18
CBX3P3-201ENST00000508108 CCL8P80075 99 aa1.46□□□□□ -2.18
CBX3P3-201ENST00000508108 DCDP81605 110 aaKnown RBP1.46□□□□□ -2.18
CBX3P3-201ENST00000508108 XAF1Q6GPH4 301 aa1.46□□□□□ -2.18
CBX3P3-201ENST00000508108 ZNF818PQ6ZRF7 136 aa1.46□□□□□ -2.18
Retrieved 100 of 20,778 RNA–protein pairs in 109.3 ms