RNA–Protein interactions for RNA: ENST00000508037.1

HMGB3P16-201, Transcript of high mobility group box 3 pseudogene 16, humanhuman

BASIC

Gene HMGB3P16, Length 287 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P16-201ENST00000508037 ZFAND6Q6FIF0 208 aa3.76□□□□□ -1.81
HMGB3P16-201ENST00000508037 C11orf71Q6IPW1 123 aa3.76□□□□□ -1.81
HMGB3P16-201ENST00000508037 Q6ZUT4 128 aa3.76□□□□□ -1.81
HMGB3P16-201ENST00000508037 ZFAND2AQ8N6M9 145 aa3.76□□□□□ -1.81
HMGB3P16-201ENST00000508037 C14orf178Q8N769 122 aaPredicted RBP3.76□□□□□ -1.81
HMGB3P16-201ENST00000508037 SLC25A29Q8N8R3 303 aa3.76□□□□□ -1.81
HMGB3P16-201ENST00000508037 PLEKHB2Q96CS7 222 aa3.76□□□□□ -1.81
HMGB3P16-201ENST00000508037 FAM19A4Q96LR4 140 aa3.76□□□□□ -1.81
HMGB3P16-201ENST00000508037 MOB4Q9Y3A3 225 aa3.76□□□□□ -1.81
HMGB3P16-201ENST00000508037 ARFGEF3Q5TH69 2177 aa3.76□□□□□ -1.81
HMGB3P16-201ENST00000508037 SPTBN5Q9NRC6 3674 aaKnown RBP3.76□□□□□ -1.81
HMGB3P16-201ENST00000508037 WDR87Q6ZQQ6 2873 aa3.75□□□□□ -1.81
HMGB3P16-201ENST00000508037 IGHV3OR16-8A0A075B7F1 116 aa3.75□□□□□ -1.81
HMGB3P16-201ENST00000508037 A0A0B4J2C4 111 aa3.75□□□□□ -1.81
HMGB3P16-201ENST00000508037 IGHV3-66A0A0C4DH42 116 aa3.75□□□□□ -1.81
HMGB3P16-201ENST00000508037 A0A0J9YX75 114 aa3.75□□□□□ -1.81
HMGB3P16-201ENST00000508037 TRBV27A0A0K0K1C4 114 aa3.75□□□□□ -1.81
HMGB3P16-201ENST00000508037 SDHAF1A6NFY7 115 aa3.75□□□□□ -1.81
HMGB3P16-201ENST00000508037 IGIPA6NJ69 53 aa3.75□□□□□ -1.81
HMGB3P16-201ENST00000508037 J3QQQ9 107 aa3.75□□□□□ -1.81
HMGB3P16-201ENST00000508037 NPFFO15130 113 aa3.75□□□□□ -1.81
HMGB3P16-201ENST00000508037 LEPROTO15243 131 aa3.75□□□□□ -1.81
HMGB3P16-201ENST00000508037 RNASE4P34096 147 aaKnown RBP3.75□□□□□ -1.81
HMGB3P16-201ENST00000508037 ATXN8Q156A1 80 aa3.75□□□□□ -1.81
HMGB3P16-201ENST00000508037 ANXA2RQ3ZCQ2 193 aa3.75□□□□□ -1.81
HMGB3P16-201ENST00000508037 TMEM170BQ5T4T1 132 aa3.75□□□□□ -1.81
HMGB3P16-201ENST00000508037 FAM159AQ6UWV7 190 aa3.75□□□□□ -1.81
HMGB3P16-201ENST00000508037 ZFP2Q6ZN57 461 aa3.75□□□□□ -1.81
HMGB3P16-201ENST00000508037 NFE4Q86UQ8 179 aa3.75□□□□□ -1.81
HMGB3P16-201ENST00000508037 TEX29Q8N6K0 151 aa3.75□□□□□ -1.81
HMGB3P16-201ENST00000508037 C5orf56Q8N8D9 126 aa3.75□□□□□ -1.81
HMGB3P16-201ENST00000508037 RPL39LQ96EH5 51 aaKnown RBP3.75□□□□□ -1.81
HMGB3P16-201ENST00000508037 ODF3Q96PU9 254 aa3.75□□□□□ -1.81
HMGB3P16-201ENST00000508037 SPANXDQ9BXN6 97 aa3.75□□□□□ -1.81
HMGB3P16-201ENST00000508037 CDIP1Q9H305 208 aa3.75□□□□□ -1.81
HMGB3P16-201ENST00000508037 ERG28Q9UKR5 140 aa3.75□□□□□ -1.81
HMGB3P16-201ENST00000508037 TP53TG1Q9Y2A0 90 aa3.75□□□□□ -1.81
HMGB3P16-201ENST00000508037 SZT2Q5T011 3432 aa3.74□□□□□ -1.81
HMGB3P16-201ENST00000508037 IGLV4-69A0A075B6H9 119 aa3.74□□□□□ -1.81
HMGB3P16-201ENST00000508037 IGHV3OR16-13A0A075B7E8 117 aa3.74□□□□□ -1.81
HMGB3P16-201ENST00000508037 IGHV3-74A0A0B4J1X5 117 aa3.74□□□□□ -1.81
HMGB3P16-201ENST00000508037 F5H697 171 aa3.74□□□□□ -1.81
HMGB3P16-201ENST00000508037 G3V318 75 aa3.74□□□□□ -1.81
HMGB3P16-201ENST00000508037 LGALS9O00182 355 aa3.74□□□□□ -1.81
HMGB3P16-201ENST00000508037 CCL21O00585 134 aa3.74□□□□□ -1.81
HMGB3P16-201ENST00000508037 SOCS3O14543 225 aa3.74□□□□□ -1.81
HMGB3P16-201ENST00000508037 SLC25A20O43772 301 aa3.74□□□□□ -1.81
HMGB3P16-201ENST00000508037 SNCGO76070 127 aa3.74□□□□□ -1.81
HMGB3P16-201ENST00000508037 DUSP14O95147 198 aaKnown RBP3.74□□□□□ -1.81
HMGB3P16-201ENST00000508037 TCL1BO95988 128 aa3.74□□□□□ -1.81
HMGB3P16-201ENST00000508037 IGHV3-30P01768 117 aa3.74□□□□□ -1.81
HMGB3P16-201ENST00000508037 IGHV3-30-5P0DP03 117 aa3.74□□□□□ -1.81
HMGB3P16-201ENST00000508037 LAMA1P25391 3075 aa3.74□□□□□ -1.81
HMGB3P16-201ENST00000508037 SAA4P35542 130 aa3.74□□□□□ -1.81
HMGB3P16-201ENST00000508037 POLR2KP53803 58 aaKnown RBP3.74□□□□□ -1.81
HMGB3P16-201ENST00000508037 MRPL23Q16540 153 aaKnown RBP3.74□□□□□ -1.81
HMGB3P16-201ENST00000508037 NSUN5P1Q3KNT7 163 aa3.74□□□□□ -1.81
HMGB3P16-201ENST00000508037 ZNF876PQ49A33 203 aa3.74□□□□□ -1.81
HMGB3P16-201ENST00000508037 C19orf54Q5BKX5 351 aa3.74□□□□□ -1.81
HMGB3P16-201ENST00000508037 PRR9Q5T870 116 aa3.74□□□□□ -1.81
HMGB3P16-201ENST00000508037 TRPT1Q86TN4 253 aaKnown RBP3.74□□□□□ -1.81
HMGB3P16-201ENST00000508037 GPHB5Q86YW7 130 aa3.74□□□□□ -1.81
HMGB3P16-201ENST00000508037 LINC01600Q96MT4 127 aa3.74□□□□□ -1.81
HMGB3P16-201ENST00000508037 ANAPC13Q9BS18 74 aa3.74□□□□□ -1.81
HMGB3P16-201ENST00000508037 KRTAP4-7Q9BYR0 210 aa3.74□□□□□ -1.81
HMGB3P16-201ENST00000508037 MDFICQ9P1T7 246 aa3.74□□□□□ -1.81
HMGB3P16-201ENST00000508037 ABCA1O95477 2261 aa3.74□□□□□ -1.81
HMGB3P16-201ENST00000508037 TRAV26-1A0A087WT03 109 aa3.73□□□□□ -1.81
HMGB3P16-201ENST00000508037 IGHV3-49A0A0A0MS15 119 aa3.73□□□□□ -1.81
HMGB3P16-201ENST00000508037 KLLNB2CW77 178 aa3.73□□□□□ -1.81
HMGB3P16-201ENST00000508037 K7EMT4 169 aa3.73□□□□□ -1.81
HMGB3P16-201ENST00000508037 K7ENP7 123 aa3.73□□□□□ -1.81
HMGB3P16-201ENST00000508037 M0R2P5 195 aa3.73□□□□□ -1.81
HMGB3P16-201ENST00000508037 MT-ATP8P03928 68 aa3.73□□□□□ -1.81
HMGB3P16-201ENST00000508037 IGF1P05019 195 aa3.73□□□□□ -1.81
HMGB3P16-201ENST00000508037 CRYGDP07320 174 aa3.73□□□□□ -1.81
HMGB3P16-201ENST00000508037 COX6CP09669 75 aa3.73□□□□□ -1.81
HMGB3P16-201ENST00000508037 CFC1BP0CG36 223 aa3.73□□□□□ -1.81
HMGB3P16-201ENST00000508037 CFC1P0CG37 223 aa3.73□□□□□ -1.81
HMGB3P16-201ENST00000508037 RNASE3P12724 160 aaKnown RBP3.73□□□□□ -1.81
HMGB3P16-201ENST00000508037 ZFP36P26651 326 aaKnown RBP3.73□□□□□ -1.81
HMGB3P16-201ENST00000508037 INSL3P51460 131 aa3.73□□□□□ -1.81
HMGB3P16-201ENST00000508037 UCNP55089 124 aa3.73□□□□□ -1.81
HMGB3P16-201ENST00000508037 RPL11P62913 178 aaKnown RBP3.73□□□□□ -1.81
HMGB3P16-201ENST00000508037 GAGE2BQ13066 116 aa3.73□□□□□ -1.81
HMGB3P16-201ENST00000508037 GAGE2EQ4V326 116 aa3.73□□□□□ -1.81
HMGB3P16-201ENST00000508037 SUMO4Q6EEV6 95 aa3.73□□□□□ -1.81
HMGB3P16-201ENST00000508037 Q6Q795 121 aa3.73□□□□□ -1.81
HMGB3P16-201ENST00000508037 ANKRD29Q8N6D5 301 aa3.73□□□□□ -1.81
HMGB3P16-201ENST00000508037 RNF183Q96D59 192 aa3.73□□□□□ -1.81
HMGB3P16-201ENST00000508037 C20orf173Q96LM9 149 aa3.73□□□□□ -1.81
HMGB3P16-201ENST00000508037 DAZ1Q9NQZ3 744 aaKnown RBP3.73□□□□□ -1.81
HMGB3P16-201ENST00000508037 YAE1D1Q9NRH1 226 aa3.73□□□□□ -1.81
HMGB3P16-201ENST00000508037 GAGE2DQ9UEU5 116 aa3.73□□□□□ -1.81
HMGB3P16-201ENST00000508037 KIF25-AS1Q9Y6Z4 181 aa3.73□□□□□ -1.81
HMGB3P16-201ENST00000508037 CUL9Q8IWT3 2517 aa3.73□□□□□ -1.81
HMGB3P16-201ENST00000508037 TRGV11A0A075B6L2 103 aa3.72□□□□□ -1.81
HMGB3P16-201ENST00000508037 TRAV8-4A0A0B4J246 113 aa3.72□□□□□ -1.81
HMGB3P16-201ENST00000508037 TRBV30A0A0K0K1B3 111 aa3.72□□□□□ -1.81
HMGB3P16-201ENST00000508037 TMEM223A0PJW6 202 aa3.72□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms