RNA–Protein interactions for RNA: ENST00000507678.5

SPCS3-203, Transcript of signal peptidase complex subunit 3, humanhuman

TSL 2

Gene SPCS3, Length 2,655 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPCS3-203ENST00000507678 SORL1Q92673 2214 aa16.62■□□□□ 0.25
SPCS3-203ENST00000507678 NMUP48645 174 aa16.62■□□□□ 0.25
SPCS3-203ENST00000507678 DSCR9P59020 149 aa16.62■□□□□ 0.25
SPCS3-203ENST00000507678 KRTAP10-9P60411 292 aa16.62■□□□□ 0.25
SPCS3-203ENST00000507678 SMAGPQ0VAQ4 97 aa16.62■□□□□ 0.25
SPCS3-203ENST00000507678 C14orf178Q8N769 122 aaPredicted RBP16.62■□□□□ 0.25
SPCS3-203ENST00000507678 PHLDA3Q9Y5J5 127 aa16.62■□□□□ 0.25
SPCS3-203ENST00000507678 EPG5Q9HCE0 2579 aa16.61■□□□□ 0.25
SPCS3-203ENST00000507678 AZU1P20160 251 aa16.61■□□□□ 0.25
SPCS3-203ENST00000507678 FCER1GP30273 86 aa16.61■□□□□ 0.25
SPCS3-203ENST00000507678 MGPP08493 103 aa16.6■□□□□ 0.25
SPCS3-203ENST00000507678 GATA3P23771 443 aa16.6■□□□□ 0.25
SPCS3-203ENST00000507678 PSMB8P28062 276 aa16.6■□□□□ 0.25
SPCS3-203ENST00000507678 TLN2Q9Y4G6 2542 aa16.6■□□□□ 0.25
SPCS3-203ENST00000507678 ASIPP42127 132 aa16.6■□□□□ 0.25
SPCS3-203ENST00000507678 NRACQ8N912 160 aa16.6■□□□□ 0.25
SPCS3-203ENST00000507678 LENEPQ9Y5L5 61 aa16.6■□□□□ 0.25
SPCS3-203ENST00000507678 RPL24P83731 157 aaKnown RBP16.59■□□□□ 0.25
SPCS3-203ENST00000507678 ZNF688P0C7X2 276 aa16.59■□□□□ 0.25
SPCS3-203ENST00000507678 Q8N8P6 123 aa16.59■□□□□ 0.25
SPCS3-203ENST00000507678 FOXC2Q99958 501 aa16.59■□□□□ 0.25
SPCS3-203ENST00000507678 TEX15Q9BXT5 2789 aa16.59■□□□□ 0.25
SPCS3-203ENST00000507678 H3BRM9 83 aa16.58■□□□□ 0.25
SPCS3-203ENST00000507678 BRI3O95415 125 aa16.58■□□□□ 0.25
SPCS3-203ENST00000507678 DEFB104AQ8WTQ1 72 aa16.58■□□□□ 0.25
SPCS3-203ENST00000507678 SRSF1Q07955 248 aaKnown RBP eCLIP16.58■□□□□ 0.247e-9■□□□□ 9
SPCS3-203ENST00000507678 BEX4Q9NWD9 120 aaPredicted RBP16.58■□□□□ 0.24
SPCS3-203ENST00000507678 SPCS1Q9Y6A9 102 aa16.57■□□□□ 0.24
SPCS3-203ENST00000507678 IGLV2-18A0A075B6J9 118 aa16.56■□□□□ 0.24
SPCS3-203ENST00000507678 A0A096LNT2 108 aa16.56■□□□□ 0.24
SPCS3-203ENST00000507678 SMIM17P0DL12 118 aa16.56■□□□□ 0.24
SPCS3-203ENST00000507678 SYNJ2BPP57105 145 aa16.56■□□□□ 0.24
SPCS3-203ENST00000507678 PCP2Q8IVA1 136 aa16.56■□□□□ 0.24
SPCS3-203ENST00000507678 RPL39LQ96EH5 51 aaKnown RBP16.56■□□□□ 0.24
SPCS3-203ENST00000507678 A6NDN8 102 aa16.56■□□□□ 0.24
SPCS3-203ENST00000507678 PSMG4Q5JS54 123 aa16.56■□□□□ 0.24
SPCS3-203ENST00000507678 TEX48A0A1B0GUV7 120 aa16.55■□□□□ 0.24
SPCS3-203ENST00000507678 LAGE3Q14657 143 aa16.55■□□□□ 0.24
SPCS3-203ENST00000507678 TRAV12-3A0A0B4J271 114 aa16.54■□□□□ 0.24
SPCS3-203ENST00000507678 DCANP1Q8TF63 244 aa16.54■□□□□ 0.24
SPCS3-203ENST00000507678 TTTY13Q9BZ97 58 aa16.54■□□□□ 0.24
SPCS3-203ENST00000507678 IGHV4-4A0A075B6R2 117 aa16.54■□□□□ 0.24
SPCS3-203ENST00000507678 FGF6P10767 208 aa16.54■□□□□ 0.24
SPCS3-203ENST00000507678 AGRNO00468 2067 aa16.54■□□□□ 0.24
SPCS3-203ENST00000507678 TRAV12-2A0A075B6T6 113 aa16.53■□□□□ 0.24
SPCS3-203ENST00000507678 ID1P41134 155 aa16.53■□□□□ 0.24
SPCS3-203ENST00000507678 ODF1Q14990 250 aa16.53■□□□□ 0.24
SPCS3-203ENST00000507678 UBR5O95071 2799 aaPredicted RBP16.53■□□□□ 0.24
SPCS3-203ENST00000507678 RNASE3P12724 160 aaKnown RBP16.53■□□□□ 0.24
SPCS3-203ENST00000507678 HIST2H2BDQ6DRA6 164 aa16.53■□□□□ 0.24
SPCS3-203ENST00000507678 HOXA3O43365 443 aaPredicted RBP16.53■□□□□ 0.24
SPCS3-203ENST00000507678 ZNF843Q8N446 348 aa16.53■□□□□ 0.24
SPCS3-203ENST00000507678 FAM19A4Q96LR4 140 aa16.53■□□□□ 0.24
SPCS3-203ENST00000507678 SIGMAR1Q99720 223 aa16.53■□□□□ 0.24
SPCS3-203ENST00000507678 MYO9AB2RTY4 2548 aa16.52■□□□□ 0.24
SPCS3-203ENST00000507678 A0A1W2PPM0 123 aa16.52■□□□□ 0.24
SPCS3-203ENST00000507678 TMEM160Q9NX00 188 aa16.52■□□□□ 0.24
SPCS3-203ENST00000507678 DPF1Q92782 380 aa16.52■□□□□ 0.23
SPCS3-203ENST00000507678 JPT2Q9H910 190 aa16.52■□□□□ 0.23
SPCS3-203ENST00000507678 A0A1B0GV72 72 aa16.51■□□□□ 0.23
SPCS3-203ENST00000507678 LINC01546A6NGU7 62 aa16.51■□□□□ 0.23
SPCS3-203ENST00000507678 FAM159AQ6UWV7 190 aa16.51■□□□□ 0.23
SPCS3-203ENST00000507678 MYOZ3Q8TDC0 251 aa16.51■□□□□ 0.23
SPCS3-203ENST00000507678 DPH3P1Q9H4G8 78 aa16.51■□□□□ 0.23
SPCS3-203ENST00000507678 VPREB3Q9UKI3 123 aa16.51■□□□□ 0.23
SPCS3-203ENST00000507678 ZNF469Q96JG9 3925 aaPredicted RBP16.51■□□□□ 0.23
SPCS3-203ENST00000507678 SONP18583 2426 aaKnown RBP16.51■□□□□ 0.23
SPCS3-203ENST00000507678 K7EMT4 169 aa16.51■□□□□ 0.23
SPCS3-203ENST00000507678 GTSCR1Q86UQ5 136 aa16.51■□□□□ 0.23
SPCS3-203ENST00000507678 RASL10AQ92737 203 aa16.51■□□□□ 0.23
SPCS3-203ENST00000507678 IGHV4OR15-8A0A075B7B6 117 aa16.5■□□□□ 0.23
SPCS3-203ENST00000507678 A0A087WW49 117 aa16.5■□□□□ 0.23
SPCS3-203ENST00000507678 IGKV2D-26A0A0A0MRZ7 120 aa16.5■□□□□ 0.23
SPCS3-203ENST00000507678 CD7P09564 240 aa16.5■□□□□ 0.23
SPCS3-203ENST00000507678 IGHV4-31P0DP07 118 aa16.5■□□□□ 0.23
SPCS3-203ENST00000507678 HSD52Q0P140 79 aa16.5■□□□□ 0.23
SPCS3-203ENST00000507678 DEFB136Q30KP8 78 aa16.5■□□□□ 0.23
SPCS3-203ENST00000507678 OR5A1Q8NGJ0 315 aa16.5■□□□□ 0.23
SPCS3-203ENST00000507678 MRAP2Q96G30 205 aa16.5■□□□□ 0.23
SPCS3-203ENST00000507678 SMIM2Q9BVW6 85 aa16.5■□□□□ 0.23
SPCS3-203ENST00000507678 MUC4Q99102 2169 aa16.49■□□□□ 0.23
SPCS3-203ENST00000507678 CUBNO60494 3623 aa16.49■□□□□ 0.23
SPCS3-203ENST00000507678 IGKCP01834 107 aa16.49■□□□□ 0.23
SPCS3-203ENST00000507678 BOD1L2Q8IYS8 172 aa16.49■□□□□ 0.23
SPCS3-203ENST00000507678 J3QLI3 93 aa16.48■□□□□ 0.23
SPCS3-203ENST00000507678 SUMO2P61956 95 aaKnown RBP16.48■□□□□ 0.23
SPCS3-203ENST00000507678 MRPL35Q9NZE8 188 aaKnown RBP16.48■□□□□ 0.23
SPCS3-203ENST00000507678 TSSC4Q9Y5U2 329 aaPredicted RBP16.48■□□□□ 0.23
SPCS3-203ENST00000507678 A0A087WWL8 130 aa16.48■□□□□ 0.23
SPCS3-203ENST00000507678 C18orf65Q6ZTR6 163 aa16.48■□□□□ 0.23
SPCS3-203ENST00000507678 ZC2HC1BQ5TFG8 222 aa16.47■□□□□ 0.23
SPCS3-203ENST00000507678 NBPF19A0A087WUL8 3843 aa16.47■□□□□ 0.23
SPCS3-203ENST00000507678 SCGB1A1P11684 91 aa16.46■□□□□ 0.23
SPCS3-203ENST00000507678 FABP2P12104 132 aa16.46■□□□□ 0.23
SPCS3-203ENST00000507678 HOXD3P31249 432 aaPredicted RBP16.46■□□□□ 0.23
SPCS3-203ENST00000507678 HHLA3Q9XRX5 114 aa16.46■□□□□ 0.23
SPCS3-203ENST00000507678 KLLNB2CW77 178 aa16.46■□□□□ 0.23
SPCS3-203ENST00000507678 ATP5LO75964 103 aa16.46■□□□□ 0.23
SPCS3-203ENST00000507678 DUX3Q96PT4 197 aa16.46■□□□□ 0.23
SPCS3-203ENST00000507678 ZNF702PQ9H963 129 aa16.46■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms