RNA–Protein interactions for RNA: ENST00000506927.1

CLDND1-213, Transcript of claudin domain containing 1, humanhuman

TSL 2

Gene CLDND1, Length 520 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-213ENST00000506927 C1QTNF4Q9BXJ3 329 aa4.45□□□□□ -1.7
CLDND1-213ENST00000506927 S4R3C0 116 aa4.45□□□□□ -1.7
CLDND1-213ENST00000506927 RANBP2P49792 3224 aaKnown RBP4.45□□□□□ -1.7
CLDND1-213ENST00000506927 IGKV2D-26A0A0A0MRZ7 120 aa4.44□□□□□ -1.7
CLDND1-213ENST00000506927 TRAV8-2A0A0B4J237 113 aa4.44□□□□□ -1.7
CLDND1-213ENST00000506927 MGPP08493 103 aa4.44□□□□□ -1.7
CLDND1-213ENST00000506927 SAA4P35542 130 aa4.44□□□□□ -1.7
CLDND1-213ENST00000506927 DLX1P56177 255 aa4.44□□□□□ -1.7
CLDND1-213ENST00000506927 FXYD7P58549 80 aa4.44□□□□□ -1.7
CLDND1-213ENST00000506927 SNRPD3P62318 126 aaKnown RBP4.44□□□□□ -1.7
CLDND1-213ENST00000506927 NDPQ00604 133 aa4.44□□□□□ -1.7
CLDND1-213ENST00000506927 TRPT1Q86TN4 253 aaKnown RBP4.44□□□□□ -1.7
CLDND1-213ENST00000506927 RNF182Q8N6D2 247 aa4.44□□□□□ -1.7
CLDND1-213ENST00000506927 C5orf56Q8N8D9 126 aa4.44□□□□□ -1.7
CLDND1-213ENST00000506927 BAALCQ8WXS3 180 aa4.44□□□□□ -1.7
CLDND1-213ENST00000506927 DAZ1Q9NQZ3 744 aaKnown RBP4.44□□□□□ -1.7
CLDND1-213ENST00000506927 YAE1D1Q9NRH1 226 aa4.44□□□□□ -1.7
CLDND1-213ENST00000506927 PRO1854Q9UHT4 67 aa4.44□□□□□ -1.7
CLDND1-213ENST00000506927 SPTBN5Q9NRC6 3674 aaKnown RBP4.43□□□□□ -1.7
CLDND1-213ENST00000506927 LOC107984156A0A0G2JMH3 177 aa4.43□□□□□ -1.7
CLDND1-213ENST00000506927 A0A0J9YX75 114 aa4.43□□□□□ -1.7
CLDND1-213ENST00000506927 TRBV27A0A0K0K1C4 114 aa4.43□□□□□ -1.7
CLDND1-213ENST00000506927 CLPSL1A2RUU4 121 aa4.43□□□□□ -1.7
CLDND1-213ENST00000506927 PRAC2D3DTV9 90 aa4.43□□□□□ -1.7
CLDND1-213ENST00000506927 LGALS1P09382 135 aaKnown RBP4.43□□□□□ -1.7
CLDND1-213ENST00000506927 PPIFP30405 207 aaKnown RBP4.43□□□□□ -1.7
CLDND1-213ENST00000506927 RNASE4P34096 147 aaKnown RBP4.43□□□□□ -1.7
CLDND1-213ENST00000506927 PSMB2P49721 201 aa4.43□□□□□ -1.7
CLDND1-213ENST00000506927 UBE2D1P51668 147 aa4.43□□□□□ -1.7
CLDND1-213ENST00000506927 PIK3CD-AS1Q5SR53 167 aa4.43□□□□□ -1.7
CLDND1-213ENST00000506927 TEN1Q86WV5 123 aa4.43□□□□□ -1.7
CLDND1-213ENST00000506927 ARL17AQ8IVW1 177 aa4.43□□□□□ -1.7
CLDND1-213ENST00000506927 SLC25A29Q8N8R3 303 aa4.43□□□□□ -1.7
CLDND1-213ENST00000506927 RASL10AQ92737 203 aa4.43□□□□□ -1.7
CLDND1-213ENST00000506927 FAM19A4Q96LR4 140 aa4.43□□□□□ -1.7
CLDND1-213ENST00000506927 KRTAP17-1Q9BYP8 105 aa4.43□□□□□ -1.7
CLDND1-213ENST00000506927 TSSC4Q9Y5U2 329 aaPredicted RBP4.43□□□□□ -1.7
CLDND1-213ENST00000506927 CADP27708 2225 aa4.43□□□□□ -1.7
CLDND1-213ENST00000506927 NAV3Q8IVL0 2385 aa4.42□□□□□ -1.7
CLDND1-213ENST00000506927 A0A0B4J2C4 111 aa4.42□□□□□ -1.7
CLDND1-213ENST00000506927 SDHAF1A6NFY7 115 aa4.42□□□□□ -1.7
CLDND1-213ENST00000506927 F5H697 171 aa4.42□□□□□ -1.7
CLDND1-213ENST00000506927 I3L3M4 83 aa4.42□□□□□ -1.7
CLDND1-213ENST00000506927 M0R2P5 195 aa4.42□□□□□ -1.7
CLDND1-213ENST00000506927 LGALS9O00182 355 aa4.42□□□□□ -1.7
CLDND1-213ENST00000506927 LEPROTO15243 131 aa4.42□□□□□ -1.7
CLDND1-213ENST00000506927 TRIOO75962 3097 aa4.42□□□□□ -1.7
CLDND1-213ENST00000506927 ZNF688P0C7X2 276 aa4.42□□□□□ -1.7
CLDND1-213ENST00000506927 P0DMU3 169 aa4.42□□□□□ -1.7
CLDND1-213ENST00000506927 FAM231AP0DMU4 169 aa4.42□□□□□ -1.7
CLDND1-213ENST00000506927 FAM231CP0DMU5 169 aa4.42□□□□□ -1.7
CLDND1-213ENST00000506927 DSCR9P59020 149 aa4.42□□□□□ -1.7
CLDND1-213ENST00000506927 CKS1BP61024 79 aa4.42□□□□□ -1.7
CLDND1-213ENST00000506927 UBE2D3P61077 147 aa4.42□□□□□ -1.7
CLDND1-213ENST00000506927 UBE2D2P62837 147 aa4.42□□□□□ -1.7
CLDND1-213ENST00000506927 WFDC2Q14508 124 aa4.42□□□□□ -1.7
CLDND1-213ENST00000506927 ATXN8Q156A1 80 aa4.42□□□□□ -1.7
CLDND1-213ENST00000506927 NSUN5P1Q3KNT7 163 aa4.42□□□□□ -1.7
CLDND1-213ENST00000506927 ANXA2RQ3ZCQ2 193 aa4.42□□□□□ -1.7
CLDND1-213ENST00000506927 ETDBQ3ZM63 59 aa4.42□□□□□ -1.7
CLDND1-213ENST00000506927 ARFGEF3Q5TH69 2177 aa4.42□□□□□ -1.7
CLDND1-213ENST00000506927 ZFP2Q6ZN57 461 aa4.42□□□□□ -1.7
CLDND1-213ENST00000506927 NFE4Q86UQ8 179 aa4.42□□□□□ -1.7
CLDND1-213ENST00000506927 GPHB5Q86YW7 130 aa4.42□□□□□ -1.7
CLDND1-213ENST00000506927 C10orf126Q8N4M7 172 aa4.42□□□□□ -1.7
CLDND1-213ENST00000506927 ZFAND2AQ8N6M9 145 aa4.42□□□□□ -1.7
CLDND1-213ENST00000506927 C14orf178Q8N769 122 aaPredicted RBP4.42□□□□□ -1.7
CLDND1-213ENST00000506927 MAPKAPK5-AS1Q8N8E1 139 aa4.42□□□□□ -1.7
CLDND1-213ENST00000506927 ZNF418Q8TF45 676 aaPredicted RBP4.42□□□□□ -1.7
CLDND1-213ENST00000506927 RNF183Q96D59 192 aa4.42□□□□□ -1.7
CLDND1-213ENST00000506927 PIMREGQ9BSJ6 248 aa4.42□□□□□ -1.7
CLDND1-213ENST00000506927 GTSF1LQ9H1H1 148 aa4.42□□□□□ -1.7
CLDND1-213ENST00000506927 MDFICQ9P1T7 246 aa4.42□□□□□ -1.7
CLDND1-213ENST00000506927 ERG28Q9UKR5 140 aa4.42□□□□□ -1.7
CLDND1-213ENST00000506927 CUL9Q8IWT3 2517 aa4.41□□□□□ -1.7
CLDND1-213ENST00000506927 IGIPA6NJ69 53 aa4.41□□□□□ -1.7
CLDND1-213ENST00000506927 KLLNB2CW77 178 aa4.41□□□□□ -1.7
CLDND1-213ENST00000506927 J3QQQ9 107 aa4.41□□□□□ -1.7
CLDND1-213ENST00000506927 K7ERJ3 54 aa4.41□□□□□ -1.7
CLDND1-213ENST00000506927 IGHG2P01859 326 aa4.41□□□□□ -1.7
CLDND1-213ENST00000506927 GATA1P15976 413 aaPredicted RBP4.41□□□□□ -1.7
CLDND1-213ENST00000506927 POLR2KP53803 58 aaKnown RBP4.41□□□□□ -1.7
CLDND1-213ENST00000506927 CIRBPQ14011 172 aaKnown RBP4.41□□□□□ -1.7
CLDND1-213ENST00000506927 MRPL23Q16540 153 aaKnown RBP4.41□□□□□ -1.7
CLDND1-213ENST00000506927 ZNF876PQ49A33 203 aa4.41□□□□□ -1.7
CLDND1-213ENST00000506927 TMEM170BQ5T4T1 132 aa4.41□□□□□ -1.7
CLDND1-213ENST00000506927 CFAP126Q5VTH2 177 aa4.41□□□□□ -1.7
CLDND1-213ENST00000506927 ZNF575Q86XF7 245 aa4.41□□□□□ -1.7
CLDND1-213ENST00000506927 NDUFA11Q86Y39 141 aa4.41□□□□□ -1.7
CLDND1-213ENST00000506927 TEX29Q8N6K0 151 aa4.41□□□□□ -1.7
CLDND1-213ENST00000506927 RNF152Q8N8N0 203 aa4.41□□□□□ -1.7
CLDND1-213ENST00000506927 SPAG8Q99932 426 aaPredicted RBP4.41□□□□□ -1.7
CLDND1-213ENST00000506927 NAA38Q9BRA0 125 aaKnown RBP4.41□□□□□ -1.7
CLDND1-213ENST00000506927 RHPN1-AS1Q9BWJ2 59 aa4.41□□□□□ -1.7
CLDND1-213ENST00000506927 EDA2RQ9HAV5 297 aa4.41□□□□□ -1.7
CLDND1-213ENST00000506927 SPANXCQ9NY87 97 aa4.41□□□□□ -1.7
CLDND1-213ENST00000506927 TP53TG1Q9Y2A0 90 aa4.41□□□□□ -1.7
CLDND1-213ENST00000506927 PYGO1Q9Y3Y4 419 aa4.41□□□□□ -1.7
CLDND1-213ENST00000506927 PLCE1Q9P212 2302 aa4.41□□□□□ -1.7
CLDND1-213ENST00000506927 VCANP13611 3396 aa4.4□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms