RNA–Protein interactions for RNA: ENST00000506858.2

SCAMP1-202, Transcript of secretory carrier membrane protein 1, humanhuman

TSL 1 (best)

Gene SCAMP1, Length 1,603 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP1-202ENST00000506858 TDRG1Q3Y452 100 aa6.28□□□□□ -1.4
SCAMP1-202ENST00000506858 LINC01551Q86U37 167 aa6.28□□□□□ -1.4
SCAMP1-202ENST00000506858 OR2D3Q8NGH3 330 aa6.28□□□□□ -1.4
SCAMP1-202ENST00000506858 C11orf45Q8TAV5 145 aa6.28□□□□□ -1.4
SCAMP1-202ENST00000506858 C16orf74Q96GX8 76 aa6.28□□□□□ -1.4
SCAMP1-202ENST00000506858 LINC00467Q9BRT7 94 aa6.28□□□□□ -1.4
SCAMP1-202ENST00000506858 SDF2L1Q9HCN8 221 aa6.28□□□□□ -1.4
SCAMP1-202ENST00000506858 NACAE9PAV3 2078 aa6.28□□□□□ -1.4
SCAMP1-202ENST00000506858 TMEM189A5PLL7 270 aa6.28□□□□□ -1.4
SCAMP1-202ENST00000506858 SNURFLB1AK76 121 aa6.28□□□□□ -1.4
SCAMP1-202ENST00000506858 IGHV3-53P01767 116 aa6.28□□□□□ -1.4
SCAMP1-202ENST00000506858 RNASE3P12724 160 aaKnown RBP6.28□□□□□ -1.4
SCAMP1-202ENST00000506858 HTN3P15516 51 aa6.28□□□□□ -1.4
SCAMP1-202ENST00000506858 ADCYAP1P18509 176 aa6.28□□□□□ -1.4
SCAMP1-202ENST00000506858 TCL1AP56279 114 aa6.28□□□□□ -1.4
SCAMP1-202ENST00000506858 ZNF493Q6ZR52 646 aa6.28□□□□□ -1.4
SCAMP1-202ENST00000506858 Q6ZTC4 211 aa6.28□□□□□ -1.4
SCAMP1-202ENST00000506858 IL17DQ8TAD2 202 aa6.28□□□□□ -1.4
SCAMP1-202ENST00000506858 DAZAP1Q96EP5 407 aaKnown RBP6.28□□□□□ -1.4
SCAMP1-202ENST00000506858 C11orf68Q9H3H3 251 aaKnown RBP6.28□□□□□ -1.4
SCAMP1-202ENST00000506858 TRGV11A0A075B6L2 103 aa6.27□□□□□ -1.41
SCAMP1-202ENST00000506858 TMEM218A2RU14 115 aa6.27□□□□□ -1.41
SCAMP1-202ENST00000506858 ARMS2P0C7Q2 107 aa6.27□□□□□ -1.41
SCAMP1-202ENST00000506858 SPART-AS1P0CW21 52 aa6.27□□□□□ -1.41
SCAMP1-202ENST00000506858 S100A4P26447 101 aaKnown RBP6.27□□□□□ -1.41
SCAMP1-202ENST00000506858 ZNF415Q09FC8 603 aa6.27□□□□□ -1.41
SCAMP1-202ENST00000506858 KCNS1Q96KK3 526 aa6.27□□□□□ -1.41
SCAMP1-202ENST00000506858 TPPP3Q9BW30 176 aa6.27□□□□□ -1.41
SCAMP1-202ENST00000506858 SMDT1Q9H4I9 107 aa6.27□□□□□ -1.41
SCAMP1-202ENST00000506858 NAT8Q9UHE5 227 aa6.27□□□□□ -1.41
SCAMP1-202ENST00000506858 NDUFS6O75380 124 aaKnown RBP6.26□□□□□ -1.41
SCAMP1-202ENST00000506858 P01737 135 aa6.26□□□□□ -1.41
SCAMP1-202ENST00000506858 ASIPP42127 132 aa6.26□□□□□ -1.41
SCAMP1-202ENST00000506858 ERVFC1-1P60608 527 aa6.26□□□□□ -1.41
SCAMP1-202ENST00000506858 DAD1P61803 113 aa6.26□□□□□ -1.41
SCAMP1-202ENST00000506858 KRTAP4-11Q9BYQ6 195 aa6.26□□□□□ -1.41
SCAMP1-202ENST00000506858 JPT2Q9H910 190 aa6.26□□□□□ -1.41
SCAMP1-202ENST00000506858 F8W036 122 aa6.25□□□□□ -1.41
SCAMP1-202ENST00000506858 GATCO43716 136 aaKnown RBP6.25□□□□□ -1.41
SCAMP1-202ENST00000506858 SPINK4O60575 86 aa6.25□□□□□ -1.41
SCAMP1-202ENST00000506858 DAZ2Q13117 558 aaKnown RBP6.25□□□□□ -1.41
SCAMP1-202ENST00000506858 FAM74A3Q4VXF1 159 aa6.25□□□□□ -1.41
SCAMP1-202ENST00000506858 IBA57Q5T440 356 aaKnown RBP6.25□□□□□ -1.41
SCAMP1-202ENST00000506858 OR10AG1Q8NH19 301 aa6.25□□□□□ -1.41
SCAMP1-202ENST00000506858 ISOC2Q96AB3 205 aa6.25□□□□□ -1.41
SCAMP1-202ENST00000506858 C9orf85Q96MD7 179 aa6.25□□□□□ -1.41
SCAMP1-202ENST00000506858 WWC2-AS2Q96NR7 200 aa6.25□□□□□ -1.41
SCAMP1-202ENST00000506858 IGHV3-73A0A0B4J1V6 119 aa6.25□□□□□ -1.41
SCAMP1-202ENST00000506858 M0R381 172 aa6.25□□□□□ -1.41
SCAMP1-202ENST00000506858 ZNF876PQ49A33 203 aa6.25□□□□□ -1.41
SCAMP1-202ENST00000506858 UQCC3Q6UW78 93 aa6.25□□□□□ -1.41
SCAMP1-202ENST00000506858 POM121L12Q8N7R1 296 aa6.25□□□□□ -1.41
SCAMP1-202ENST00000506858 GTSF1Q8WW33 167 aa6.25□□□□□ -1.41
SCAMP1-202ENST00000506858 SMIM12Q96EX1 92 aa6.25□□□□□ -1.41
SCAMP1-202ENST00000506858 RPP21Q9H633 154 aaKnown RBP6.25□□□□□ -1.41
SCAMP1-202ENST00000506858 LY96Q9Y6Y9 160 aa6.25□□□□□ -1.41
SCAMP1-202ENST00000506858 TRGV2A0A075B6R0 118 aa6.24□□□□□ -1.41
SCAMP1-202ENST00000506858 LYRM9A8MSI8 78 aa6.24□□□□□ -1.41
SCAMP1-202ENST00000506858 M0R2P5 195 aa6.24□□□□□ -1.41
SCAMP1-202ENST00000506858 PHLDA1Q8WV24 401 aaPredicted RBP6.24□□□□□ -1.41
SCAMP1-202ENST00000506858 SAMD10Q9BYL1 202 aa6.24□□□□□ -1.41
SCAMP1-202ENST00000506858 MSRB1Q9NZV6 116 aa6.24□□□□□ -1.41
SCAMP1-202ENST00000506858 V9GYV3 84 aa6.24□□□□□ -1.41
SCAMP1-202ENST00000506858 DEFB131BA0A096LNP1 70 aa6.23□□□□□ -1.41
SCAMP1-202ENST00000506858 HOXA5P20719 270 aa6.23□□□□□ -1.41
SCAMP1-202ENST00000506858 LYZL1Q6UWQ5 148 aa6.23□□□□□ -1.41
SCAMP1-202ENST00000506858 LINC00612Q8N6U2 182 aa6.23□□□□□ -1.41
SCAMP1-202ENST00000506858 OR10G8Q8NGN5 311 aa6.23□□□□□ -1.41
SCAMP1-202ENST00000506858 MUC7Q8TAX7 377 aa6.23□□□□□ -1.41
SCAMP1-202ENST00000506858 SFRP2Q96HF1 295 aa6.23□□□□□ -1.41
SCAMP1-202ENST00000506858 ZNF479Q96JC4 524 aa6.23□□□□□ -1.41
SCAMP1-202ENST00000506858 PGLYRP4Q96LB8 373 aa6.23□□□□□ -1.41
SCAMP1-202ENST00000506858 SPXQ9BT56 116 aa6.23□□□□□ -1.41
SCAMP1-202ENST00000506858 SCRT2Q9NQ03 307 aa6.23□□□□□ -1.41
SCAMP1-202ENST00000506858 BIN3Q9NQY0 253 aa6.23□□□□□ -1.41
SCAMP1-202ENST00000506858 OSTCQ9NRP0 149 aa6.23□□□□□ -1.41
SCAMP1-202ENST00000506858 IL36BQ9NZH7 164 aa6.23□□□□□ -1.41
SCAMP1-202ENST00000506858 PHLDA3Q9Y5J5 127 aa6.23□□□□□ -1.41
SCAMP1-202ENST00000506858 A0A087WWL8 130 aa6.22□□□□□ -1.41
SCAMP1-202ENST00000506858 F5H768 121 aa6.22□□□□□ -1.41
SCAMP1-202ENST00000506858 IGLC6P0CF74 106 aa6.22□□□□□ -1.41
SCAMP1-202ENST00000506858 RNF212Q495C1 297 aa6.22□□□□□ -1.41
SCAMP1-202ENST00000506858 Q6ZSN1 163 aa6.22□□□□□ -1.41
SCAMP1-202ENST00000506858 FAM231DQ6ZW35 169 aa6.22□□□□□ -1.41
SCAMP1-202ENST00000506858 FER1L6-AS1Q8NA97 138 aa6.22□□□□□ -1.41
SCAMP1-202ENST00000506858 A0A0J9YY99 117 aa6.21□□□□□ -1.41
SCAMP1-202ENST00000506858 IGLL5B9A064 214 aa6.21□□□□□ -1.41
SCAMP1-202ENST00000506858 FOXA3P55318 350 aaPredicted RBP6.21□□□□□ -1.41
SCAMP1-202ENST00000506858 DNLZQ5SXM8 178 aa6.21□□□□□ -1.41
SCAMP1-202ENST00000506858 RASL10AQ92737 203 aa6.21□□□□□ -1.41
SCAMP1-202ENST00000506858 SEC11CQ9BY50 192 aa6.21□□□□□ -1.41
SCAMP1-202ENST00000506858 Q9UF83 564 aa6.21□□□□□ -1.41
SCAMP1-202ENST00000506858 VPS13DQ5THJ4 4388 aa6.21□□□□□ -1.41
SCAMP1-202ENST00000506858 LYSTQ99698 3801 aa6.21□□□□□ -1.42
SCAMP1-202ENST00000506858 SNAI2O43623 268 aa6.21□□□□□ -1.42
SCAMP1-202ENST00000506858 ATP5G1P05496 136 aa6.21□□□□□ -1.42
SCAMP1-202ENST00000506858 RPS20P60866 119 aaKnown RBP6.21□□□□□ -1.42
SCAMP1-202ENST00000506858 LGALS9BQ3B8N2 356 aa6.21□□□□□ -1.42
SCAMP1-202ENST00000506858 SPANXN1Q5VSR9 72 aa6.21□□□□□ -1.42
SCAMP1-202ENST00000506858 CFAP126Q5VTH2 177 aa6.21□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms