RNA–Protein interactions for RNA: ENST00000506714.5

HERC6-206, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 6, humanhuman

TSL 2

Gene HERC6, Length 2,293 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6-206ENST00000506714 C19orf54Q5BKX5 351 aa11.39□□□□□ -0.59
HERC6-206ENST00000506714 C14orf178Q8N769 122 aaPredicted RBP11.39□□□□□ -0.59
HERC6-206ENST00000506714 IGF1P05019 195 aa11.39□□□□□ -0.59
HERC6-206ENST00000506714 RPL39LQ96EH5 51 aaKnown RBP11.39□□□□□ -0.59
HERC6-206ENST00000506714 CYSLTR1Q9Y271 337 aa11.39□□□□□ -0.59
HERC6-206ENST00000506714 DCHS2Q6V1P9 2916 aa11.39□□□□□ -0.59
HERC6-206ENST00000506714 PRSS29PA6NIE9 313 aa11.38□□□□□ -0.59
HERC6-206ENST00000506714 AZU1P20160 251 aa11.38□□□□□ -0.59
HERC6-206ENST00000506714 ANXA2RQ3ZCQ2 193 aa11.38□□□□□ -0.59
HERC6-206ENST00000506714 PAPPA-AS1Q5QFB9 102 aa11.38□□□□□ -0.59
HERC6-206ENST00000506714 PRADC1Q9BSG0 188 aa11.38□□□□□ -0.59
HERC6-206ENST00000506714 SOCS3O14543 225 aa11.38□□□□□ -0.59
HERC6-206ENST00000506714 MGPP08493 103 aa11.38□□□□□ -0.59
HERC6-206ENST00000506714 ETDBQ3ZM63 59 aa11.38□□□□□ -0.59
HERC6-206ENST00000506714 APRG1Q8IVJ8 170 aa11.38□□□□□ -0.59
HERC6-206ENST00000506714 POM121L12Q8N7R1 296 aa11.38□□□□□ -0.59
HERC6-206ENST00000506714 FAM19A4Q96LR4 140 aa11.38□□□□□ -0.59
HERC6-206ENST00000506714 SPATA25Q9BR10 227 aa11.38□□□□□ -0.59
HERC6-206ENST00000506714 TSSC4Q9Y5U2 329 aaPredicted RBP11.38□□□□□ -0.59
HERC6-206ENST00000506714 IGHV1-69DA0A0B4J2H0 117 aa11.37□□□□□ -0.59
HERC6-206ENST00000506714 LMO4P61968 165 aa11.37□□□□□ -0.59
HERC6-206ENST00000506714 RPL32P62910 135 aaKnown RBP11.37□□□□□ -0.59
HERC6-206ENST00000506714 GPHB5Q86YW7 130 aa11.37□□□□□ -0.59
HERC6-206ENST00000506714 PRO0461Q9UI25 63 aa11.37□□□□□ -0.59
HERC6-206ENST00000506714 HRNRQ86YZ3 2850 aaPredicted RBP11.37□□□□□ -0.59
HERC6-206ENST00000506714 ZNF815PA8K554 130 aa11.37□□□□□ -0.59
HERC6-206ENST00000506714 RNF223E7ERA6 249 aa11.37□□□□□ -0.59
HERC6-206ENST00000506714 AMTNQ6UX39 209 aa11.37□□□□□ -0.59
HERC6-206ENST00000506714 SPAG8Q99932 426 aaPredicted RBP11.37□□□□□ -0.59
HERC6-206ENST00000506714 CIDEAO60543 219 aa11.36□□□□□ -0.59
HERC6-206ENST00000506714 MORN3Q6PF18 240 aaPredicted RBP11.36□□□□□ -0.59
HERC6-206ENST00000506714 GTSF1LQ9H1H1 148 aa11.36□□□□□ -0.59
HERC6-206ENST00000506714 RNASE4P34096 147 aaKnown RBP11.35□□□□□ -0.59
HERC6-206ENST00000506714 SCGB1D4Q6XE38 83 aa11.35□□□□□ -0.59
HERC6-206ENST00000506714 SH2D6Q7Z4S9 175 aa11.35□□□□□ -0.59
HERC6-206ENST00000506714 ZFYVE26Q68DK2 2539 aa11.35□□□□□ -0.59
HERC6-206ENST00000506714 IGHV4OR15-8A0A075B7B6 117 aa11.35□□□□□ -0.59
HERC6-206ENST00000506714 A0A087WW49 117 aa11.35□□□□□ -0.59
HERC6-206ENST00000506714 NXPH4O95158 308 aa11.35□□□□□ -0.59
HERC6-206ENST00000506714 BRI3O95415 125 aa11.35□□□□□ -0.59
HERC6-206ENST00000506714 HERVK_113P61574 105 aa11.35□□□□□ -0.59
HERC6-206ENST00000506714 USMG5Q96IX5 58 aa11.35□□□□□ -0.59
HERC6-206ENST00000506714 MRPL16Q9NX20 251 aaKnown RBP11.35□□□□□ -0.59
HERC6-206ENST00000506714 PGPEP1Q9NXJ5 209 aa11.35□□□□□ -0.59
HERC6-206ENST00000506714 RNASE3P12724 160 aaKnown RBP11.34□□□□□ -0.59
HERC6-206ENST00000506714 COX6B1P14854 86 aa11.34□□□□□ -0.59
HERC6-206ENST00000506714 SRSF9Q13242 221 aaKnown RBP eCLIP11.34□□□□□ -0.59
HERC6-206ENST00000506714 UNQ9165/PRO28630Q6UXU0 137 aa11.34□□□□□ -0.59
HERC6-206ENST00000506714 TMEM219Q86XT9 240 aa11.34□□□□□ -0.59
HERC6-206ENST00000506714 H3BUA1 57 aa11.34□□□□□ -0.59
HERC6-206ENST00000506714 C19orf84I3L1E1 186 aa11.34□□□□□ -0.59
HERC6-206ENST00000506714 UBE2D1P51668 147 aa11.34□□□□□ -0.59
HERC6-206ENST00000506714 LYRM7Q5U5X0 104 aa11.34□□□□□ -0.59
HERC6-206ENST00000506714 ATP6V0E2Q8NHE4 81 aa11.34□□□□□ -0.59
HERC6-206ENST00000506714 DLX4Q92988 240 aaPredicted RBP11.34□□□□□ -0.59
HERC6-206ENST00000506714 A0A1W2PPR1 153 aa11.33□□□□□ -0.6
HERC6-206ENST00000506714 GNRH2O43555 120 aa11.33□□□□□ -0.6
HERC6-206ENST00000506714 BPESC1Q9GZL8 116 aa11.33□□□□□ -0.6
HERC6-206ENST00000506714 NDUFS8O00217 210 aa11.33□□□□□ -0.6
HERC6-206ENST00000506714 SPRY2O43597 315 aa11.33□□□□□ -0.6
HERC6-206ENST00000506714 SMAGPQ0VAQ4 97 aa11.33□□□□□ -0.6
HERC6-206ENST00000506714 TMEM141Q96I45 108 aa11.33□□□□□ -0.6
HERC6-206ENST00000506714 UBTD1Q9HAC8 227 aa11.33□□□□□ -0.6
HERC6-206ENST00000506714 LINC00527Q9UJ94 153 aa11.33□□□□□ -0.6
HERC6-206ENST00000506714 PRB1P04280 392 aa11.32□□□□□ -0.6
HERC6-206ENST00000506714 RPL11P62913 178 aaKnown RBP11.32□□□□□ -0.6
HERC6-206ENST00000506714 KIF25-AS1Q9Y6Z4 181 aa11.32□□□□□ -0.6
HERC6-206ENST00000506714 CRYGDP07320 174 aa11.32□□□□□ -0.6
HERC6-206ENST00000506714 PMVKQ15126 192 aa11.32□□□□□ -0.6
HERC6-206ENST00000506714 VCYO14598 125 aa11.31□□□□□ -0.6
HERC6-206ENST00000506714 DUSP14O95147 198 aaKnown RBP11.31□□□□□ -0.6
HERC6-206ENST00000506714 APOMO95445 188 aa11.31□□□□□ -0.6
HERC6-206ENST00000506714 TRBV12-3P01733 135 aa11.31□□□□□ -0.6
HERC6-206ENST00000506714 MUC4Q99102 2169 aa11.31□□□□□ -0.6
HERC6-206ENST00000506714 EPG5Q9HCE0 2579 aa11.31□□□□□ -0.6
HERC6-206ENST00000506714 MED13LQ71F56 2210 aa11.31□□□□□ -0.6
HERC6-206ENST00000506714 CSMD1Q96PZ7 3565 aa11.31□□□□□ -0.6
HERC6-206ENST00000506714 IGIPA6NJ69 53 aa11.3□□□□□ -0.6
HERC6-206ENST00000506714 POLR2KP53803 58 aaKnown RBP11.3□□□□□ -0.6
HERC6-206ENST00000506714 LINC00315P59091 139 aa11.3□□□□□ -0.6
HERC6-206ENST00000506714 CFAP126Q5VTH2 177 aa11.3□□□□□ -0.6
HERC6-206ENST00000506714 PLEKHB2Q96CS7 222 aa11.3□□□□□ -0.6
HERC6-206ENST00000506714 KIR2DL4Q99706 377 aa11.3□□□□□ -0.6
HERC6-206ENST00000506714 IGHV1-69P01742 117 aa11.3□□□□□ -0.6
HERC6-206ENST00000506714 FAM159AQ6UWV7 190 aa11.3□□□□□ -0.6
HERC6-206ENST00000506714 ZFP2Q6ZN57 461 aa11.3□□□□□ -0.6
HERC6-206ENST00000506714 CLUHP3Q96NS8 147 aa11.3□□□□□ -0.6
HERC6-206ENST00000506714 BBC3Q96PG8 261 aaPredicted RBP11.3□□□□□ -0.6
HERC6-206ENST00000506714 TIMM17AQ99595 171 aa11.3□□□□□ -0.6
HERC6-206ENST00000506714 C1QTNF4Q9BXJ3 329 aa11.3□□□□□ -0.6
HERC6-206ENST00000506714 TP53TG1Q9Y2A0 90 aa11.3□□□□□ -0.6
HERC6-206ENST00000506714 SPTAN1Q13813 2472 aaKnown RBP11.3□□□□□ -0.6
HERC6-206ENST00000506714 IGLV4-69A0A075B6H9 119 aa11.29□□□□□ -0.6
HERC6-206ENST00000506714 C11orf86A6NJI1 115 aa11.29□□□□□ -0.6
HERC6-206ENST00000506714 FOXI1Q12951 378 aa11.29□□□□□ -0.6
HERC6-206ENST00000506714 KLLNB2CW77 178 aa11.29□□□□□ -0.6
HERC6-206ENST00000506714 F6UB75 175 aa11.29□□□□□ -0.6
HERC6-206ENST00000506714 TSHBP01222 138 aa11.29□□□□□ -0.6
HERC6-206ENST00000506714 CD7P09564 240 aa11.29□□□□□ -0.6
HERC6-206ENST00000506714 DEFB1P60022 68 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms