RNA–Protein interactions for RNA: ENST00000506560.5

LIN54-206, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

TSL 1 (best) BASIC

Gene LIN54, Length 2,757 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-206ENST00000506560 KNCNA6PVL3 124 aa9.08□□□□□ -0.96
LIN54-206ENST00000506560 M0R381 172 aa9.08□□□□□ -0.96
LIN54-206ENST00000506560 LY6G6DO95868 133 aa9.08□□□□□ -0.96
LIN54-206ENST00000506560 SPINK13Q1W4C9 94 aa9.08□□□□□ -0.96
LIN54-206ENST00000506560 UQCR10Q9UDW1 63 aa9.08□□□□□ -0.96
LIN54-206ENST00000506560 U3KQK5 164 aa9.08□□□□□ -0.96
LIN54-206ENST00000506560 KLLNB2CW77 178 aa9.07□□□□□ -0.96
LIN54-206ENST00000506560 CKS2P33552 79 aa9.07□□□□□ -0.96
LIN54-206ENST00000506560 COL5A1-AS1Q5SY13 56 aa9.07□□□□□ -0.96
LIN54-206ENST00000506560 ORMDL3Q8N138 153 aa9.07□□□□□ -0.96
LIN54-206ENST00000506560 RNASE3P12724 160 aaKnown RBP9.07□□□□□ -0.96
LIN54-206ENST00000506560 HNRNPA3P51991 378 aaKnown RBP9.07□□□□□ -0.96
LIN54-206ENST00000506560 APRG1Q8IVJ8 170 aa9.07□□□□□ -0.96
LIN54-206ENST00000506560 A0A096LNJ9 63 aa9.07□□□□□ -0.96
LIN54-206ENST00000506560 SNAI2O43623 268 aa9.07□□□□□ -0.96
LIN54-206ENST00000506560 SNRPD3P62318 126 aaKnown RBP9.07□□□□□ -0.96
LIN54-206ENST00000506560 GAGE1Q13065 139 aa9.07□□□□□ -0.96
LIN54-206ENST00000506560 SPANXN1Q5VSR9 72 aa9.07□□□□□ -0.96
LIN54-206ENST00000506560 PRM2P04554 102 aa9.06□□□□□ -0.96
LIN54-206ENST00000506560 OR5AL1P0C617 328 aa9.06□□□□□ -0.96
LIN54-206ENST00000506560 DEFB131AP59861 70 aa9.06□□□□□ -0.96
LIN54-206ENST00000506560 PRSS3P2Q8NHM4 247 aa9.06□□□□□ -0.96
LIN54-206ENST00000506560 LAMTOR2Q9Y2Q5 125 aa9.06□□□□□ -0.96
LIN54-206ENST00000506560 VWFP04275 2813 aa9.06□□□□□ -0.96
LIN54-206ENST00000506560 RNASE1P07998 156 aaKnown RBP9.06□□□□□ -0.96
LIN54-206ENST00000506560 DMRTA1Q5VZB9 504 aa9.06□□□□□ -0.96
LIN54-206ENST00000506560 Q6ZVH6 145 aa9.06□□□□□ -0.96
LIN54-206ENST00000506560 CHCHD1Q96BP2 118 aaKnown RBP9.06□□□□□ -0.96
LIN54-206ENST00000506560 H0Y8G0 127 aa9.05□□□□□ -0.96
LIN54-206ENST00000506560 S100A4P26447 101 aaKnown RBP9.05□□□□□ -0.96
LIN54-206ENST00000506560 CD300EQ496F6 205 aaPredicted RBP9.05□□□□□ -0.96
LIN54-206ENST00000506560 TEX29Q8N6K0 151 aa9.05□□□□□ -0.96
LIN54-206ENST00000506560 AP5S1Q9NUS5 200 aa9.05□□□□□ -0.96
LIN54-206ENST00000506560 TP73-AS1Q9UF72 201 aa9.05□□□□□ -0.96
LIN54-206ENST00000506560 JPT2Q9H910 190 aa9.05□□□□□ -0.96
LIN54-206ENST00000506560 TENM1Q9UKZ4 2725 aa9.05□□□□□ -0.96
LIN54-206ENST00000506560 RBMY1A1P0DJD3 496 aaKnown RBP9.04□□□□□ -0.96
LIN54-206ENST00000506560 RBMY1CP0DJD4 496 aa9.04□□□□□ -0.96
LIN54-206ENST00000506560 HINT1P49773 126 aaPredicted RBP9.04□□□□□ -0.96
LIN54-206ENST00000506560 RBMY1FQ15415 496 aaKnown RBP9.04□□□□□ -0.96
LIN54-206ENST00000506560 FA2HQ7L5A8 372 aa9.04□□□□□ -0.96
LIN54-206ENST00000506560 PMCHL2Q9BQD1 86 aa9.04□□□□□ -0.96
LIN54-206ENST00000506560 RBMY1BA6NDE4 496 aaKnown RBP9.04□□□□□ -0.96
LIN54-206ENST00000506560 RBMY1EA6NEQ0 496 aaKnown RBP9.04□□□□□ -0.96
LIN54-206ENST00000506560 LEPROTL1O95214 131 aa9.04□□□□□ -0.96
LIN54-206ENST00000506560 RBMY1DP0C7P1 496 aaKnown RBP9.04□□□□□ -0.96
LIN54-206ENST00000506560 TSPOP30536 169 aa9.04□□□□□ -0.96
LIN54-206ENST00000506560 ASIPP42127 132 aa9.04□□□□□ -0.96
LIN54-206ENST00000506560 AMTNQ6UX39 209 aa9.04□□□□□ -0.96
LIN54-206ENST00000506560 C14orf178Q8N769 122 aaPredicted RBP9.04□□□□□ -0.96
LIN54-206ENST00000506560 IGLL1P15814 213 aa9.03□□□□□ -0.96
LIN54-206ENST00000506560 BTF3P20290 206 aaKnown RBP9.03□□□□□ -0.96
LIN54-206ENST00000506560 HILS1P60008 231 aa9.03□□□□□ -0.96
LIN54-206ENST00000506560 C7orf71A4D174 169 aa9.03□□□□□ -0.96
LIN54-206ENST00000506560 INAFM1C9JVW0 142 aa9.03□□□□□ -0.96
LIN54-206ENST00000506560 CCL24O00175 119 aa9.03□□□□□ -0.96
LIN54-206ENST00000506560 TNFRSF6BO95407 300 aa9.03□□□□□ -0.96
LIN54-206ENST00000506560 CD7P09564 240 aa9.03□□□□□ -0.96
LIN54-206ENST00000506560 DEFB114Q30KQ6 69 aa9.03□□□□□ -0.96
LIN54-206ENST00000506560 MDFICQ9P1T7 246 aa9.03□□□□□ -0.96
LIN54-206ENST00000506560 TCF21O43680 179 aa9.02□□□□□ -0.96
LIN54-206ENST00000506560 DYNLRB2Q8TF09 96 aa9.02□□□□□ -0.96
LIN54-206ENST00000506560 PEMTQ9UBM1 199 aa9.02□□□□□ -0.96
LIN54-206ENST00000506560 PHLDA3Q9Y5J5 127 aa9.02□□□□□ -0.96
LIN54-206ENST00000506560 IGHV4-4A0A075B6R2 117 aa9.02□□□□□ -0.97
LIN54-206ENST00000506560 TRAV9-2A0A087WT02 112 aa9.02□□□□□ -0.97
LIN54-206ENST00000506560 FHL3Q13643 280 aa9.02□□□□□ -0.97
LIN54-206ENST00000506560 SCRT2Q9NQ03 307 aa9.02□□□□□ -0.97
LIN54-206ENST00000506560 F8P00451 2351 aa9.02□□□□□ -0.97
LIN54-206ENST00000506560 TRBV7-9A0A0J9YWB2 115 aa9.01□□□□□ -0.97
LIN54-206ENST00000506560 FAM159AQ6UWV7 190 aa9.01□□□□□ -0.97
LIN54-206ENST00000506560 ZNF418Q8TF45 676 aaPredicted RBP9.01□□□□□ -0.97
LIN54-206ENST00000506560 DEFB104AQ8WTQ1 72 aa9.01□□□□□ -0.97
LIN54-206ENST00000506560 HTN1P15515 57 aa9.01□□□□□ -0.97
LIN54-206ENST00000506560 CDKN1BP46527 198 aa9.01□□□□□ -0.97
LIN54-206ENST00000506560 KRTAP10-3P60369 221 aa9.01□□□□□ -0.97
LIN54-206ENST00000506560 FOXI2Q6ZQN5 318 aa9.01□□□□□ -0.97
LIN54-206ENST00000506560 NRACQ8N912 160 aa9.01□□□□□ -0.97
LIN54-206ENST00000506560 TMEM70Q9BUB7 260 aa9.01□□□□□ -0.97
LIN54-206ENST00000506560 SYS1-DBNDD2H3BUS1 97 aa9.01□□□□□ -0.97
LIN54-206ENST00000506560 SAMD13Q5VXD3 122 aa9.01□□□□□ -0.97
LIN54-206ENST00000506560 Q8N1Y9 231 aa9.01□□□□□ -0.97
LIN54-206ENST00000506560 MAP6D1Q9H9H5 199 aa9.01□□□□□ -0.97
LIN54-206ENST00000506560 ZNF256Q9Y2P7 627 aaPredicted RBP9.01□□□□□ -0.97
LIN54-206ENST00000506560 ATRQ13535 2644 aa9□□□□□ -0.97
LIN54-206ENST00000506560 ADARB2-AS1A8MUL3 147 aa9□□□□□ -0.97
LIN54-206ENST00000506560 CRXO43186 299 aaPredicted RBP9□□□□□ -0.97
LIN54-206ENST00000506560 NSUN5P1Q3KNT7 163 aa9□□□□□ -0.97
LIN54-206ENST00000506560 RPL39LQ96EH5 51 aaKnown RBP9□□□□□ -0.97
LIN54-206ENST00000506560 OR4C46A6NHA9 309 aa9□□□□□ -0.97
LIN54-206ENST00000506560 H3BMM0 161 aa9□□□□□ -0.97
LIN54-206ENST00000506560 ZNF747Q9BV97 191 aa9□□□□□ -0.97
LIN54-206ENST00000506560 C16orf95Q9H693 158 aa9□□□□□ -0.97
LIN54-206ENST00000506560 MRPS16Q9Y3D3 137 aaKnown RBP9□□□□□ -0.97
LIN54-206ENST00000506560 A0A087WWL8 130 aa8.99□□□□□ -0.97
LIN54-206ENST00000506560 MGPP08493 103 aa8.99□□□□□ -0.97
LIN54-206ENST00000506560 CACNG7P62955 275 aa8.99□□□□□ -0.97
LIN54-206ENST00000506560 OR2K2Q8NGT1 345 aa8.99□□□□□ -0.97
LIN54-206ENST00000506560 LEPP41159 167 aa8.99□□□□□ -0.97
LIN54-206ENST00000506560 MAP1LC3AQ9H492 121 aa8.99□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms