RNA–Protein interactions for RNA: ENST00000506063.1

TCOF1-208, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 4

Gene TCOF1, Length 526 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-208ENST00000506063 FLGP20930 4061 aaPredicted RBP2.05□□□□□ -2.08
TCOF1-208ENST00000506063 TRGV2A0A075B6R0 118 aa2.04□□□□□ -2.08
TCOF1-208ENST00000506063 TRAV12-3A0A0B4J271 114 aa2.04□□□□□ -2.08
TCOF1-208ENST00000506063 IGHV3-38A0A0C4DH36 116 aa2.04□□□□□ -2.08
TCOF1-208ENST00000506063 TRBV7-9A0A0J9YWB2 115 aa2.04□□□□□ -2.08
TCOF1-208ENST00000506063 RBAKDNA6NC62 111 aa2.04□□□□□ -2.08
TCOF1-208ENST00000506063 UMAD1C9J7I0 102 aa2.04□□□□□ -2.08
TCOF1-208ENST00000506063 C9JCJ5 164 aa2.04□□□□□ -2.08
TCOF1-208ENST00000506063 KRTAP4-16G5E9R7 235 aaPredicted RBP2.04□□□□□ -2.08
TCOF1-208ENST00000506063 H3BQ15 152 aa2.04□□□□□ -2.08
TCOF1-208ENST00000506063 HMGB3O15347 200 aaKnown RBP2.04□□□□□ -2.08
TCOF1-208ENST00000506063 BCL2L11O43521 198 aa2.04□□□□□ -2.08
TCOF1-208ENST00000506063 IFNA7P01567 189 aa2.04□□□□□ -2.08
TCOF1-208ENST00000506063 TPT1P13693 172 aaKnown RBP2.04□□□□□ -2.08
TCOF1-208ENST00000506063 GCHFRP30047 84 aa2.04□□□□□ -2.08
TCOF1-208ENST00000506063 AKR1C3P42330 323 aa2.04□□□□□ -2.08
TCOF1-208ENST00000506063 ZNF138P52744 262 aa2.04□□□□□ -2.08
TCOF1-208ENST00000506063 UBE2G1P62253 170 aa2.04□□□□□ -2.08
TCOF1-208ENST00000506063 RANP62826 216 aaKnown RBP2.04□□□□□ -2.08
TCOF1-208ENST00000506063 BTN1A1Q13410 526 aa2.04□□□□□ -2.08
TCOF1-208ENST00000506063 LAGE3Q14657 143 aa2.04□□□□□ -2.08
TCOF1-208ENST00000506063 RPL7L1Q6DKI1 246 aaKnown RBP2.04□□□□□ -2.08
TCOF1-208ENST00000506063 FAM159AQ6UWV7 190 aa2.04□□□□□ -2.08
TCOF1-208ENST00000506063 SDIM1Q6ZPB5 146 aa2.04□□□□□ -2.08
TCOF1-208ENST00000506063 Q6ZTI0 123 aa2.04□□□□□ -2.08
TCOF1-208ENST00000506063 GOLT1AQ6ZVE7 132 aa2.04□□□□□ -2.08
TCOF1-208ENST00000506063 NEGR1Q7Z3B1 354 aa2.04□□□□□ -2.08
TCOF1-208ENST00000506063 AKAP14Q86UN6 197 aa2.04□□□□□ -2.08
TCOF1-208ENST00000506063 Q8N3U1 123 aa2.04□□□□□ -2.08
TCOF1-208ENST00000506063 EIF4E3Q8N5X7 224 aaKnown RBP2.04□□□□□ -2.08
TCOF1-208ENST00000506063 CYB561D1Q8N8Q1 229 aa2.04□□□□□ -2.08
TCOF1-208ENST00000506063 TMED6Q8WW62 240 aa2.04□□□□□ -2.08
TCOF1-208ENST00000506063 FXYD5Q96DB9 178 aa2.04□□□□□ -2.08
TCOF1-208ENST00000506063 LINC00477Q96M19 166 aa2.04□□□□□ -2.08
TCOF1-208ENST00000506063 TCEAL7Q9BRU2 100 aa2.04□□□□□ -2.08
TCOF1-208ENST00000506063 NKX6-2Q9C056 277 aaPredicted RBP2.04□□□□□ -2.08
TCOF1-208ENST00000506063 SH3BGRL3Q9H299 93 aa2.04□□□□□ -2.08
TCOF1-208ENST00000506063 LENEPQ9Y5L5 61 aa2.04□□□□□ -2.08
TCOF1-208ENST00000506063 ARL2-SNX15V9GYD0 113 aa2.04□□□□□ -2.08
TCOF1-208ENST00000506063 hCG_2014768A0A024R1R8 64 aa2.03□□□□□ -2.08
TCOF1-208ENST00000506063 IGHV1OR15-1A0A075B7D0 117 aa2.03□□□□□ -2.08
TCOF1-208ENST00000506063 A0A087WYN8 130 aa2.03□□□□□ -2.08
TCOF1-208ENST00000506063 TRGV1A0A0A0MS02 117 aa2.03□□□□□ -2.08
TCOF1-208ENST00000506063 TRAV21A0A0B4J279 112 aa2.03□□□□□ -2.08
TCOF1-208ENST00000506063 KLLNB2CW77 178 aa2.03□□□□□ -2.08
TCOF1-208ENST00000506063 GGTLC3B5MD39 225 aa2.03□□□□□ -2.08
TCOF1-208ENST00000506063 DIRC3C9JPN6 131 aa2.03□□□□□ -2.08
TCOF1-208ENST00000506063 PRAC2D3DTV9 90 aa2.03□□□□□ -2.08
TCOF1-208ENST00000506063 F6UZH7 168 aa2.03□□□□□ -2.08
TCOF1-208ENST00000506063 SMLR1H3BR10 107 aa2.03□□□□□ -2.08
TCOF1-208ENST00000506063 H7C1H1 209 aa2.03□□□□□ -2.08
TCOF1-208ENST00000506063 K7EQD1 137 aa2.03□□□□□ -2.08
TCOF1-208ENST00000506063 PEX7O00628 323 aa2.03□□□□□ -2.08
TCOF1-208ENST00000506063 PAX4O43316 350 aa2.03□□□□□ -2.08
TCOF1-208ENST00000506063 NDUFB4O95168 129 aa2.03□□□□□ -2.08
TCOF1-208ENST00000506063 IFNA1P01562 189 aa2.03□□□□□ -2.08
TCOF1-208ENST00000506063 NMBP08949 121 aa2.03□□□□□ -2.08
TCOF1-208ENST00000506063 STAG3L2P0CL84 134 aa2.03□□□□□ -2.08
TCOF1-208ENST00000506063 STAG3L3P0CL85 134 aa2.03□□□□□ -2.08
TCOF1-208ENST00000506063 CRISP2P16562 243 aa2.03□□□□□ -2.08
TCOF1-208ENST00000506063 S100A4P26447 101 aaKnown RBP2.03□□□□□ -2.08
TCOF1-208ENST00000506063 RNASE4P34096 147 aaKnown RBP2.03□□□□□ -2.08
TCOF1-208ENST00000506063 CRYBA4P53673 196 aa2.03□□□□□ -2.08
TCOF1-208ENST00000506063 TCL1AP56279 114 aa2.03□□□□□ -2.08
TCOF1-208ENST00000506063 UBE2G2P60604 165 aa2.03□□□□□ -2.08
TCOF1-208ENST00000506063 SMUG1Q53HV7 270 aa2.03□□□□□ -2.08
TCOF1-208ENST00000506063 CST9LP1Q5W188 147 aa2.03□□□□□ -2.08
TCOF1-208ENST00000506063 DPPA3Q6W0C5 159 aa2.03□□□□□ -2.08
TCOF1-208ENST00000506063 Q86TA4 180 aa2.03□□□□□ -2.08
TCOF1-208ENST00000506063 KCNRGQ8N5I3 272 aa2.03□□□□□ -2.08
TCOF1-208ENST00000506063 ARL6IP6Q8N6S5 226 aa2.03□□□□□ -2.08
TCOF1-208ENST00000506063 PRR26Q8N8Z3 221 aa2.03□□□□□ -2.08
TCOF1-208ENST00000506063 Q8N976 141 aa2.03□□□□□ -2.08
TCOF1-208ENST00000506063 TMEM75Q8N9X5 138 aa2.03□□□□□ -2.08
TCOF1-208ENST00000506063 FAM213BQ8TBF2 198 aa2.03□□□□□ -2.08
TCOF1-208ENST00000506063 RAB24Q969Q5 203 aa2.03□□□□□ -2.08
TCOF1-208ENST00000506063 HIST1H2BAQ96A08 127 aa2.03□□□□□ -2.08
TCOF1-208ENST00000506063 SAT2Q96F10 170 aaPredicted RBP2.03□□□□□ -2.08
TCOF1-208ENST00000506063 ST6GAL2Q96JF0 529 aa2.03□□□□□ -2.08
TCOF1-208ENST00000506063 KCNS1Q96KK3 526 aa2.03□□□□□ -2.08
TCOF1-208ENST00000506063 FAM167A-AS1Q96KT0 104 aa2.03□□□□□ -2.08
TCOF1-208ENST00000506063 DNAJC30Q96LL9 226 aa2.03□□□□□ -2.08
TCOF1-208ENST00000506063 WFDC1Q9HC57 220 aa2.03□□□□□ -2.08
TCOF1-208ENST00000506063 TREM1Q9NP99 234 aa2.03□□□□□ -2.08
TCOF1-208ENST00000506063 MANBALQ9NQG1 85 aa2.03□□□□□ -2.08
TCOF1-208ENST00000506063 ZNF492Q9P255 531 aa2.03□□□□□ -2.08
TCOF1-208ENST00000506063 PSORS1C2Q9UIG4 136 aa2.03□□□□□ -2.08
TCOF1-208ENST00000506063 TRGV4A0A0C4DH28 118 aa2.02□□□□□ -2.09
TCOF1-208ENST00000506063 A0A1B0GV50 99 aa2.02□□□□□ -2.09
TCOF1-208ENST00000506063 A0A1W2PRE2 83 aa2.02□□□□□ -2.09
TCOF1-208ENST00000506063 PGPA6NDG6 321 aa2.02□□□□□ -2.09
TCOF1-208ENST00000506063 HMSDA8MTL9 139 aa2.02□□□□□ -2.09
TCOF1-208ENST00000506063 EIF3GO75821 320 aaKnown RBP eCLIP2.02□□□□□ -2.09
TCOF1-208ENST00000506063 GCGP01275 180 aa2.02□□□□□ -2.09
TCOF1-208ENST00000506063 TCRAP04437 139 aa2.02□□□□□ -2.09
TCOF1-208ENST00000506063 PFN1P07737 140 aaKnown RBP2.02□□□□□ -2.09
TCOF1-208ENST00000506063 SEC11BP0C7V7 166 aa2.02□□□□□ -2.09
TCOF1-208ENST00000506063 GYPEP15421 78 aa2.02□□□□□ -2.09
TCOF1-208ENST00000506063 RAB5CP51148 216 aa2.02□□□□□ -2.09
TCOF1-208ENST00000506063 FGF8P55075 233 aaPredicted RBP2.02□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms