RNA–Protein interactions for RNA: ENST00000505207.5

UBE2D3-219, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 5 BASIC

Gene UBE2D3, Length 527 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-219ENST00000505207 GCGP01275 180 aa7.42□□□□□ -1.22
UBE2D3-219ENST00000505207 MBP02144 154 aa7.42□□□□□ -1.22
UBE2D3-219ENST00000505207 S100A4P26447 101 aaKnown RBP7.42□□□□□ -1.22
UBE2D3-219ENST00000505207 DEFA1P59665 94 aa7.42□□□□□ -1.22
UBE2D3-219ENST00000505207 DEFA3P59666 94 aa7.42□□□□□ -1.22
UBE2D3-219ENST00000505207 GNG5P63218 68 aa7.42□□□□□ -1.22
UBE2D3-219ENST00000505207 PIK3CD-AS1Q5SR53 167 aa7.42□□□□□ -1.22
UBE2D3-219ENST00000505207 SAPCD1Q5SSQ6 148 aa7.42□□□□□ -1.22
UBE2D3-219ENST00000505207 RMI2Q96E14 147 aa7.42□□□□□ -1.22
UBE2D3-219ENST00000505207 PSG8Q9UQ74 426 aa7.42□□□□□ -1.22
UBE2D3-219ENST00000505207 A8MWV9 139 aa7.41□□□□□ -1.22
UBE2D3-219ENST00000505207 GGTLC3B5MD39 225 aa7.41□□□□□ -1.22
UBE2D3-219ENST00000505207 HMGB3O15347 200 aaKnown RBP7.41□□□□□ -1.22
UBE2D3-219ENST00000505207 TCRAP04437 139 aa7.41□□□□□ -1.22
UBE2D3-219ENST00000505207 ARL14EPLP0DKL9 152 aa7.41□□□□□ -1.22
UBE2D3-219ENST00000505207 CDC34P49427 236 aaPredicted RBP7.41□□□□□ -1.22
UBE2D3-219ENST00000505207 FGF8P55075 233 aaPredicted RBP7.41□□□□□ -1.22
UBE2D3-219ENST00000505207 RAB2AP61019 212 aa7.41□□□□□ -1.22
UBE2D3-219ENST00000505207 FLI1Q01543 452 aaPredicted RBP7.41□□□□□ -1.22
UBE2D3-219ENST00000505207 ZFP2Q6ZN57 461 aa7.41□□□□□ -1.22
UBE2D3-219ENST00000505207 C9orf85Q96MD7 179 aa7.41□□□□□ -1.22
UBE2D3-219ENST00000505207 TMEM167BQ9NRX6 74 aa7.41□□□□□ -1.22
UBE2D3-219ENST00000505207 HERC1Q15751 4861 aa7.41□□□□□ -1.22
UBE2D3-219ENST00000505207 PGPEP1LA6NFU8 196 aa7.4□□□□□ -1.22
UBE2D3-219ENST00000505207 EIF3GO75821 320 aaKnown RBP eCLIP7.4□□□□□ -1.22
UBE2D3-219ENST00000505207 STAG3L2P0CL84 134 aa7.4□□□□□ -1.22
UBE2D3-219ENST00000505207 STAG3L3P0CL85 134 aa7.4□□□□□ -1.22
UBE2D3-219ENST00000505207 GCHFRP30047 84 aa7.4□□□□□ -1.22
UBE2D3-219ENST00000505207 SUMO1P63165 101 aaKnown RBP7.4□□□□□ -1.22
UBE2D3-219ENST00000505207 HAMPP81172 84 aa7.4□□□□□ -1.22
UBE2D3-219ENST00000505207 LGALSLQ3ZCW2 172 aaPredicted RBP7.4□□□□□ -1.22
UBE2D3-219ENST00000505207 ZNF506Q5JVG8 444 aa7.4□□□□□ -1.22
UBE2D3-219ENST00000505207 PRNTQ86SH4 94 aa7.4□□□□□ -1.22
UBE2D3-219ENST00000505207 CYB561D1Q8N8Q1 229 aa7.4□□□□□ -1.22
UBE2D3-219ENST00000505207 OR2G3Q8NGZ4 309 aa7.4□□□□□ -1.22
UBE2D3-219ENST00000505207 SGK494Q96LW2 274 aa7.4□□□□□ -1.22
UBE2D3-219ENST00000505207 WFDC1Q9HC57 220 aa7.4□□□□□ -1.22
UBE2D3-219ENST00000505207 EPDR1Q9UM22 224 aa7.4□□□□□ -1.22
UBE2D3-219ENST00000505207 URGCP-MRPS24S4R325 110 aa7.4□□□□□ -1.22
UBE2D3-219ENST00000505207 CXorf1O96002 111 aa7.39□□□□□ -1.23
UBE2D3-219ENST00000505207 ZNF80P51504 273 aaPredicted RBP7.39□□□□□ -1.23
UBE2D3-219ENST00000505207 SERF2P84101 59 aa7.39□□□□□ -1.23
UBE2D3-219ENST00000505207 DPPA3Q6W0C5 159 aa7.39□□□□□ -1.23
UBE2D3-219ENST00000505207 TMEM75Q8N9X5 138 aa7.39□□□□□ -1.23
UBE2D3-219ENST00000505207 DEFB104AQ8WTQ1 72 aa7.39□□□□□ -1.23
UBE2D3-219ENST00000505207 RAB24Q969Q5 203 aa7.39□□□□□ -1.23
UBE2D3-219ENST00000505207 PSMG3Q9BT73 122 aaPredicted RBP7.39□□□□□ -1.23
UBE2D3-219ENST00000505207 ACTR3CQ9C0K3 210 aaPredicted RBP7.39□□□□□ -1.23
UBE2D3-219ENST00000505207 GAGE12JA6NER3 117 aa7.38□□□□□ -1.23
UBE2D3-219ENST00000505207 FABP5P3A8MUU1 101 aa7.38□□□□□ -1.23
UBE2D3-219ENST00000505207 RNASE3P12724 160 aaKnown RBP7.38□□□□□ -1.23
UBE2D3-219ENST00000505207 ASIPP42127 132 aa7.38□□□□□ -1.23
UBE2D3-219ENST00000505207 GAGE1Q13065 139 aa7.38□□□□□ -1.23
UBE2D3-219ENST00000505207 GAGE4Q13068 117 aa7.38□□□□□ -1.23
UBE2D3-219ENST00000505207 GAGE5Q13069 117 aa7.38□□□□□ -1.23
UBE2D3-219ENST00000505207 ELOBQ15370 118 aa7.38□□□□□ -1.23
UBE2D3-219ENST00000505207 GAGE13Q4V321 117 aa7.38□□□□□ -1.23
UBE2D3-219ENST00000505207 KCNIP4Q6PIL6 250 aa7.38□□□□□ -1.23
UBE2D3-219ENST00000505207 Q8N976 141 aa7.38□□□□□ -1.23
UBE2D3-219ENST00000505207 SYT8Q8NBV8 401 aa7.38□□□□□ -1.23
UBE2D3-219ENST00000505207 SUN5Q8TC36 379 aa7.38□□□□□ -1.23
UBE2D3-219ENST00000505207 PARLQ9H300 379 aa7.38□□□□□ -1.23
UBE2D3-219ENST00000505207 FAM30AQ9NZY2 134 aa7.38□□□□□ -1.23
UBE2D3-219ENST00000505207 C11orf21Q9P2W6 132 aa7.38□□□□□ -1.23
UBE2D3-219ENST00000505207 RBFOX3A6NFN3 312 aa7.37□□□□□ -1.23
UBE2D3-219ENST00000505207 RHODO00212 210 aa7.37□□□□□ -1.23
UBE2D3-219ENST00000505207 IFNA7P01567 189 aa7.37□□□□□ -1.23
UBE2D3-219ENST00000505207 HSD17B11Q8NBQ5 300 aa7.37□□□□□ -1.23
UBE2D3-219ENST00000505207 TNFSF18Q9UNG2 199 aa7.37□□□□□ -1.23
UBE2D3-219ENST00000505207 A0A1W2PRE2 83 aa7.36□□□□□ -1.23
UBE2D3-219ENST00000505207 IGLV2-11P01706 119 aa7.36□□□□□ -1.23
UBE2D3-219ENST00000505207 IFITM3Q01628 133 aa7.36□□□□□ -1.23
UBE2D3-219ENST00000505207 Q6ZSA8 131 aa7.36□□□□□ -1.23
UBE2D3-219ENST00000505207 OR2T35Q8NGX2 323 aa7.36□□□□□ -1.23
UBE2D3-219ENST00000505207 NKX6-2Q9C056 277 aaPredicted RBP7.36□□□□□ -1.23
UBE2D3-219ENST00000505207 IL36BQ9NZH7 164 aa7.36□□□□□ -1.23
UBE2D3-219ENST00000505207 IGLV2-33A0A075B6J2 118 aaPredicted RBP7.35□□□□□ -1.23
UBE2D3-219ENST00000505207 A0A087WX48 190 aa7.35□□□□□ -1.23
UBE2D3-219ENST00000505207 KRTAP29-1A8MX34 341 aaPredicted RBP7.35□□□□□ -1.23
UBE2D3-219ENST00000505207 B4DEV8 164 aa7.35□□□□□ -1.23
UBE2D3-219ENST00000505207 LECT2O14960 151 aa7.35□□□□□ -1.23
UBE2D3-219ENST00000505207 ATP6V0CP27449 155 aa7.35□□□□□ -1.23
UBE2D3-219ENST00000505207 DAZ4Q86SG3 579 aaKnown RBP7.35□□□□□ -1.23
UBE2D3-219ENST00000505207 BAALCQ8WXS3 180 aa7.35□□□□□ -1.23
UBE2D3-219ENST00000505207 LINC00479Q96M42 142 aa7.35□□□□□ -1.23
UBE2D3-219ENST00000505207 CHCHD7Q9BUK0 85 aa7.35□□□□□ -1.23
UBE2D3-219ENST00000505207 DAZ3Q9NR90 486 aaKnown RBP7.35□□□□□ -1.23
UBE2D3-219ENST00000505207 VPS13BQ7Z7G8 4022 aa7.35□□□□□ -1.23
UBE2D3-219ENST00000505207 FAT1Q14517 4588 aa7.35□□□□□ -1.23
UBE2D3-219ENST00000505207 IGKV2D-24A0A075B6R9 120 aa7.34□□□□□ -1.23
UBE2D3-219ENST00000505207 BORCS7-ASMTA0A0B4J1R7 106 aa7.34□□□□□ -1.23
UBE2D3-219ENST00000505207 IGKV3D-20A0A0C4DH25 116 aa7.34□□□□□ -1.23
UBE2D3-219ENST00000505207 C14orf177Q52M58 125 aa7.34□□□□□ -1.23
UBE2D3-219ENST00000505207 OR11H4Q8NGC9 324 aa7.34□□□□□ -1.23
UBE2D3-219ENST00000505207 HIST1H2BAQ96A08 127 aa7.34□□□□□ -1.23
UBE2D3-219ENST00000505207 AQP10Q96PS8 301 aa7.34□□□□□ -1.23
UBE2D3-219ENST00000505207 RNF222A6NCQ9 220 aa7.33□□□□□ -1.24
UBE2D3-219ENST00000505207 LINC00694P0DN24 101 aa7.33□□□□□ -1.24
UBE2D3-219ENST00000505207 Q0VG73 95 aa7.33□□□□□ -1.24
UBE2D3-219ENST00000505207 WFDC2Q14508 124 aa7.33□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms