RNA–Protein interactions for RNA: ENST00000505199.5

SNCA-208, Transcript of synuclein alpha, humanhuman

TSL 1 (best) BASIC

Gene SNCA, Length 411 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-208ENST00000505199 M0R036 132 aa8.8□□□□□ -1
SNCA-208ENST00000505199 SNAI2O43623 268 aa8.8□□□□□ -1
SNCA-208ENST00000505199 GAGE7O76087 117 aa8.8□□□□□ -1
SNCA-208ENST00000505199 GAGE12FP0CL80 117 aa8.8□□□□□ -1
SNCA-208ENST00000505199 GAGE12GP0CL81 117 aa8.8□□□□□ -1
SNCA-208ENST00000505199 GAGE12IP0CL82 117 aa8.8□□□□□ -1
SNCA-208ENST00000505199 TMEM241Q24JQ0 296 aa8.8□□□□□ -1
SNCA-208ENST00000505199 ZFP2Q6ZN57 461 aa8.8□□□□□ -1
SNCA-208ENST00000505199 ZFP82Q8N141 532 aa8.8□□□□□ -1
SNCA-208ENST00000505199 NAT8Q9UHE5 227 aa8.8□□□□□ -1
SNCA-208ENST00000505199 PHLDA3Q9Y5J5 127 aa8.8□□□□□ -1
SNCA-208ENST00000505199 K7EN84 100 aa8.79□□□□□ -1
SNCA-208ENST00000505199 NXPH4O95158 308 aa8.79□□□□□ -1
SNCA-208ENST00000505199 ARMS2P0C7Q2 107 aa8.79□□□□□ -1
SNCA-208ENST00000505199 WDR73Q6P4I2 378 aa8.79□□□□□ -1
SNCA-208ENST00000505199 OSTCQ9NRP0 149 aa8.79□□□□□ -1
SNCA-208ENST00000505199 IGHV4-4A0A075B6R2 117 aa8.78□□□□□ -1
SNCA-208ENST00000505199 PGPEP1LA6NFU8 196 aa8.78□□□□□ -1
SNCA-208ENST00000505199 C9JQL5 133 aa8.78□□□□□ -1
SNCA-208ENST00000505199 H3BVH4 76 aa8.78□□□□□ -1
SNCA-208ENST00000505199 RHODO00212 210 aa8.78□□□□□ -1
SNCA-208ENST00000505199 IGLC6P0CF74 106 aa8.78□□□□□ -1
SNCA-208ENST00000505199 CEBPGP53567 150 aa8.78□□□□□ -1
SNCA-208ENST00000505199 PNRC1Q12796 327 aaPredicted RBP8.78□□□□□ -1
SNCA-208ENST00000505199 ZFAND6Q6FIF0 208 aa8.78□□□□□ -1
SNCA-208ENST00000505199 NUDT10Q8NFP7 164 aa8.78□□□□□ -1
SNCA-208ENST00000505199 OR2D3Q8NGH3 330 aa8.78□□□□□ -1
SNCA-208ENST00000505199 NUDT11Q96G61 164 aa8.78□□□□□ -1
SNCA-208ENST00000505199 CNFNQ9BYD5 112 aa8.78□□□□□ -1
SNCA-208ENST00000505199 GFRA4Q9GZZ7 299 aa8.78□□□□□ -1
SNCA-208ENST00000505199 RPP21Q9H633 154 aaKnown RBP8.78□□□□□ -1
SNCA-208ENST00000505199 MRPL16Q9NX20 251 aaKnown RBP8.78□□□□□ -1
SNCA-208ENST00000505199 PRO0255Q9UI72 69 aa8.78□□□□□ -1
SNCA-208ENST00000505199 A8MWL6 223 aa8.77□□□□□ -1.01
SNCA-208ENST00000505199 F5H768 121 aa8.77□□□□□ -1.01
SNCA-208ENST00000505199 FOXA3P55318 350 aaPredicted RBP8.77□□□□□ -1.01
SNCA-208ENST00000505199 ERVFC1-1P60608 527 aa8.77□□□□□ -1.01
SNCA-208ENST00000505199 SRSF3P84103 164 aaKnown RBP8.77□□□□□ -1.01
SNCA-208ENST00000505199 C15orf54Q8N8G6 183 aa8.77□□□□□ -1.01
SNCA-208ENST00000505199 OR4C5Q8NGB2 326 aa8.77□□□□□ -1.01
SNCA-208ENST00000505199 LINC00862A6NCI5 91 aa8.76□□□□□ -1.01
SNCA-208ENST00000505199 IGLL5B9A064 214 aa8.76□□□□□ -1.01
SNCA-208ENST00000505199 RS1O15537 224 aa8.76□□□□□ -1.01
SNCA-208ENST00000505199 SFTA3P0C7M3 94 aa8.76□□□□□ -1.01
SNCA-208ENST00000505199 CTRLP40313 264 aa8.76□□□□□ -1.01
SNCA-208ENST00000505199 CACNG7P62955 275 aa8.76□□□□□ -1.01
SNCA-208ENST00000505199 CFAP126Q5VTH2 177 aa8.76□□□□□ -1.01
SNCA-208ENST00000505199 FER1L6-AS1Q8NA97 138 aa8.76□□□□□ -1.01
SNCA-208ENST00000505199 ISOC2Q96AB3 205 aa8.76□□□□□ -1.01
SNCA-208ENST00000505199 APLNQ9ULZ1 77 aa8.76□□□□□ -1.01
SNCA-208ENST00000505199 TRBV6-4A0A1B0GX49 114 aa8.75□□□□□ -1.01
SNCA-208ENST00000505199 HOXA5P20719 270 aa8.75□□□□□ -1.01
SNCA-208ENST00000505199 FAM3BP58499 235 aaPredicted RBP8.75□□□□□ -1.01
SNCA-208ENST00000505199 RPL23P62829 140 aaKnown RBP8.75□□□□□ -1.01
SNCA-208ENST00000505199 RPL19P84098 196 aaKnown RBP8.75□□□□□ -1.01
SNCA-208ENST00000505199 FHL2Q14192 279 aa8.75□□□□□ -1.01
SNCA-208ENST00000505199 LGALS9CQ6DKI2 356 aa8.75□□□□□ -1.01
SNCA-208ENST00000505199 TMEM88Q6PEY1 159 aa8.75□□□□□ -1.01
SNCA-208ENST00000505199 SH2D6Q7Z4S9 175 aa8.75□□□□□ -1.01
SNCA-208ENST00000505199 POM121L12Q8N7R1 296 aa8.75□□□□□ -1.01
SNCA-208ENST00000505199 SFRP2Q96HF1 295 aa8.75□□□□□ -1.01
SNCA-208ENST00000505199 RNASE7Q9H1E1 156 aaKnown RBP8.75□□□□□ -1.01
SNCA-208ENST00000505199 HHLA3Q9XRX5 114 aa8.75□□□□□ -1.01
SNCA-208ENST00000505199 TENM2Q9NT68 2774 aa8.75□□□□□ -1.01
SNCA-208ENST00000505199 TMSB15BA0A087X1C1 80 aa8.74□□□□□ -1.01
SNCA-208ENST00000505199 TRGV4A0A0C4DH28 118 aa8.74□□□□□ -1.01
SNCA-208ENST00000505199 GRIFINA4D1Z8 144 aa8.74□□□□□ -1.01
SNCA-208ENST00000505199 GATCO43716 136 aaKnown RBP8.74□□□□□ -1.01
SNCA-208ENST00000505199 P0DMU3 169 aa8.74□□□□□ -1.01
SNCA-208ENST00000505199 FAM231AP0DMU4 169 aa8.74□□□□□ -1.01
SNCA-208ENST00000505199 FAM231CP0DMU5 169 aa8.74□□□□□ -1.01
SNCA-208ENST00000505199 HTN3P15516 51 aa8.74□□□□□ -1.01
SNCA-208ENST00000505199 DMRTA1Q5VZB9 504 aa8.74□□□□□ -1.01
SNCA-208ENST00000505199 TSKUQ8WUA8 353 aa8.74□□□□□ -1.01
SNCA-208ENST00000505199 ZNF479Q96JC4 524 aa8.74□□□□□ -1.01
SNCA-208ENST00000505199 TRAV26-1A0A087WT03 109 aa8.73□□□□□ -1.01
SNCA-208ENST00000505199 GATA1P15976 413 aaPredicted RBP8.73□□□□□ -1.01
SNCA-208ENST00000505199 CRYBA4P53673 196 aa8.73□□□□□ -1.01
SNCA-208ENST00000505199 RNF212Q495C1 297 aa8.73□□□□□ -1.01
SNCA-208ENST00000505199 SPANXN1Q5VSR9 72 aa8.73□□□□□ -1.01
SNCA-208ENST00000505199 UFSP1Q6NVU6 142 aa8.73□□□□□ -1.01
SNCA-208ENST00000505199 AP1S3Q96PC3 154 aa8.73□□□□□ -1.01
SNCA-208ENST00000505199 NACAE9PAV3 2078 aa8.73□□□□□ -1.01
SNCA-208ENST00000505199 TMEM218A2RU14 115 aa8.72□□□□□ -1.01
SNCA-208ENST00000505199 M0R381 172 aa8.72□□□□□ -1.01
SNCA-208ENST00000505199 PPP1R2P9O14990 202 aa8.72□□□□□ -1.01
SNCA-208ENST00000505199 TRGC1P0CF51 173 aa8.72□□□□□ -1.01
SNCA-208ENST00000505199 RHOHQ15669 191 aa8.72□□□□□ -1.01
SNCA-208ENST00000505199 ADIRFQ15847 76 aa8.72□□□□□ -1.01
SNCA-208ENST00000505199 MRPL23Q16540 153 aaKnown RBP8.72□□□□□ -1.01
SNCA-208ENST00000505199 OR10AG1Q8NH19 301 aa8.72□□□□□ -1.01
SNCA-208ENST00000505199 SEC11CQ9BY50 192 aa8.72□□□□□ -1.01
SNCA-208ENST00000505199 TRBV10-1A0A0K0K1A3 114 aa8.71□□□□□ -1.02
SNCA-208ENST00000505199 LCE6AA0A183 80 aa8.71□□□□□ -1.02
SNCA-208ENST00000505199 PAX4O43316 350 aa8.71□□□□□ -1.02
SNCA-208ENST00000505199 OR10G8Q8NGN5 311 aa8.71□□□□□ -1.02
SNCA-208ENST00000505199 LINC00476Q8WZB0 136 aa8.71□□□□□ -1.02
SNCA-208ENST00000505199 FRZBQ92765 325 aa8.71□□□□□ -1.02
SNCA-208ENST00000505199 VSIG2Q96IQ7 327 aa8.71□□□□□ -1.02
SNCA-208ENST00000505199 PRADC1Q9BSG0 188 aa8.71□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms