RNA–Protein interactions for RNA: ENST00000504889.5

SPOP-208, Transcript of speckle type BTB/POZ protein, humanhuman

TSL 2

Gene SPOP, Length 400 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPOP-208ENST00000504889 ZNRF2Q8NHG8 242 aa4.13□□□□□ -1.75
SPOP-208ENST00000504889 MBD3L1Q8WWY6 194 aa4.13□□□□□ -1.75
SPOP-208ENST00000504889 RASL10AQ92737 203 aa4.13□□□□□ -1.75
SPOP-208ENST00000504889 DAZAP1Q96EP5 407 aaKnown RBP4.13□□□□□ -1.75
SPOP-208ENST00000504889 ZC2HC1AQ96GY0 325 aa4.13□□□□□ -1.75
SPOP-208ENST00000504889 VSIG2Q96IQ7 327 aa4.13□□□□□ -1.75
SPOP-208ENST00000504889 PRADC1Q9BSG0 188 aa4.13□□□□□ -1.75
SPOP-208ENST00000504889 PHLDA3Q9Y5J5 127 aa4.13□□□□□ -1.75
SPOP-208ENST00000504889 KMT2AQ03164 3969 aa4.12□□□□□ -1.75
SPOP-208ENST00000504889 VPS13DQ5THJ4 4388 aa4.12□□□□□ -1.75
SPOP-208ENST00000504889 PGPEP1LA6NFU8 196 aa4.12□□□□□ -1.75
SPOP-208ENST00000504889 K7EQD1 137 aa4.12□□□□□ -1.75
SPOP-208ENST00000504889 M0R381 172 aa4.12□□□□□ -1.75
SPOP-208ENST00000504889 SIVA1O15304 175 aa4.12□□□□□ -1.75
SPOP-208ENST00000504889 NXPH4O95158 308 aa4.12□□□□□ -1.75
SPOP-208ENST00000504889 SULT1A2P50226 295 aa4.12□□□□□ -1.75
SPOP-208ENST00000504889 SSTP61278 116 aa4.12□□□□□ -1.75
SPOP-208ENST00000504889 RHOHQ15669 191 aa4.12□□□□□ -1.75
SPOP-208ENST00000504889 ZNF506Q5JVG8 444 aa4.12□□□□□ -1.75
SPOP-208ENST00000504889 BAGE2Q86Y30 109 aa4.12□□□□□ -1.75
SPOP-208ENST00000504889 C6orf223Q8N319 242 aa4.12□□□□□ -1.75
SPOP-208ENST00000504889 TPPP3Q9BW30 176 aa4.12□□□□□ -1.75
SPOP-208ENST00000504889 KRTAP9-8Q9BYQ0 159 aa4.12□□□□□ -1.75
SPOP-208ENST00000504889 C11orf21Q9P2W6 132 aa4.12□□□□□ -1.75
SPOP-208ENST00000504889 MRPS16Q9Y3D3 137 aaKnown RBP4.12□□□□□ -1.75
SPOP-208ENST00000504889 TRAV9-2A0A087WT02 112 aa4.11□□□□□ -1.75
SPOP-208ENST00000504889 IGKV3D-20A0A0C4DH25 116 aa4.11□□□□□ -1.75
SPOP-208ENST00000504889 KRTAP4-8A0A0G2JLE6 195 aa4.11□□□□□ -1.75
SPOP-208ENST00000504889 LOC100131303A0A0U1RQF7 123 aa4.11□□□□□ -1.75
SPOP-208ENST00000504889 A8MWV9 139 aa4.11□□□□□ -1.75
SPOP-208ENST00000504889 KRBOX1C9JBD0 128 aa4.11□□□□□ -1.75
SPOP-208ENST00000504889 PDE6DO43924 150 aa4.11□□□□□ -1.75
SPOP-208ENST00000504889 CIDEAO60543 219 aa4.11□□□□□ -1.75
SPOP-208ENST00000504889 LTAP01374 205 aa4.11□□□□□ -1.75
SPOP-208ENST00000504889 ARMS2P0C7Q2 107 aa4.11□□□□□ -1.75
SPOP-208ENST00000504889 RNASE3P12724 160 aaKnown RBP4.11□□□□□ -1.75
SPOP-208ENST00000504889 RPL35P42766 123 aaKnown RBP4.11□□□□□ -1.75
SPOP-208ENST00000504889 GNG4P50150 75 aa4.11□□□□□ -1.75
SPOP-208ENST00000504889 CEBPGP53567 150 aa4.11□□□□□ -1.75
SPOP-208ENST00000504889 OR10J3Q5JRS4 329 aa4.11□□□□□ -1.75
SPOP-208ENST00000504889 CFAP126Q5VTH2 177 aa4.11□□□□□ -1.75
SPOP-208ENST00000504889 ALKAL2Q6UX46 152 aa4.11□□□□□ -1.75
SPOP-208ENST00000504889 SH2D6Q7Z4S9 175 aa4.11□□□□□ -1.75
SPOP-208ENST00000504889 C9orf85Q96MD7 179 aa4.11□□□□□ -1.75
SPOP-208ENST00000504889 MED9Q9NWA0 146 aa4.11□□□□□ -1.75
SPOP-208ENST00000504889 LY96Q9Y6Y9 160 aa4.11□□□□□ -1.75
SPOP-208ENST00000504889 A0A087WWL8 130 aa4.1□□□□□ -1.75
SPOP-208ENST00000504889 TRAV8-6A0A0B4J262 113 aa4.1□□□□□ -1.75
SPOP-208ENST00000504889 TRBV6-1A0A0K0K1D8 114 aa4.1□□□□□ -1.75
SPOP-208ENST00000504889 GAGE12JA6NER3 117 aa4.1□□□□□ -1.75
SPOP-208ENST00000504889 RTL8CO15255 209 aa4.1□□□□□ -1.75
SPOP-208ENST00000504889 RS1O15537 224 aa4.1□□□□□ -1.75
SPOP-208ENST00000504889 SMIM17P0DL12 118 aa4.1□□□□□ -1.75
SPOP-208ENST00000504889 GATA1P15976 413 aaPredicted RBP4.1□□□□□ -1.75
SPOP-208ENST00000504889 EVI2AP22794 236 aa4.1□□□□□ -1.75
SPOP-208ENST00000504889 CRIP1P50238 77 aa4.1□□□□□ -1.75
SPOP-208ENST00000504889 CCL20P78556 96 aa4.1□□□□□ -1.75
SPOP-208ENST00000504889 RPL19P84098 196 aaKnown RBP4.1□□□□□ -1.75
SPOP-208ENST00000504889 MEF2BQ02080 365 aaPredicted RBP4.1□□□□□ -1.75
SPOP-208ENST00000504889 GAGE1Q13065 139 aa4.1□□□□□ -1.75
SPOP-208ENST00000504889 GAGE4Q13068 117 aa4.1□□□□□ -1.75
SPOP-208ENST00000504889 GAGE5Q13069 117 aa4.1□□□□□ -1.75
SPOP-208ENST00000504889 ZNF56Q15929 161 aa4.1□□□□□ -1.75
SPOP-208ENST00000504889 ZNF674Q2M3X9 581 aa4.1□□□□□ -1.75
SPOP-208ENST00000504889 GAGE13Q4V321 117 aa4.1□□□□□ -1.75
SPOP-208ENST00000504889 CENPWQ5EE01 88 aa4.1□□□□□ -1.75
SPOP-208ENST00000504889 SPANXN1Q5VSR9 72 aa4.1□□□□□ -1.75
SPOP-208ENST00000504889 LYPD5Q6UWN5 251 aa4.1□□□□□ -1.75
SPOP-208ENST00000504889 Q6ZR54 194 aa4.1□□□□□ -1.75
SPOP-208ENST00000504889 ZFP82Q8N141 532 aa4.1□□□□□ -1.75
SPOP-208ENST00000504889 C9orf62Q8N4C0 152 aa4.1□□□□□ -1.75
SPOP-208ENST00000504889 SLC25A29Q8N8R3 303 aa4.1□□□□□ -1.75
SPOP-208ENST00000504889 UPK3BQ9BT76 320 aa4.1□□□□□ -1.75
SPOP-208ENST00000504889 DERL1Q9BUN8 251 aa4.1□□□□□ -1.75
SPOP-208ENST00000504889 IL36BQ9NZH7 164 aa4.1□□□□□ -1.75
SPOP-208ENST00000504889 VAX2Q9UIW0 290 aa4.1□□□□□ -1.75
SPOP-208ENST00000504889 FRAS1Q86XX4 4008 aa4.1□□□□□ -1.75
SPOP-208ENST00000504889 DNAH2Q9P225 4427 aa4.09□□□□□ -1.75
SPOP-208ENST00000504889 TRBV6-4A0A1B0GX49 114 aa4.09□□□□□ -1.75
SPOP-208ENST00000504889 A0A1W2PPQ1 181 aa4.09□□□□□ -1.75
SPOP-208ENST00000504889 XKRY2A2RUG3 117 aa4.09□□□□□ -1.75
SPOP-208ENST00000504889 F5H697 171 aa4.09□□□□□ -1.75
SPOP-208ENST00000504889 RHODO00212 210 aa4.09□□□□□ -1.75
SPOP-208ENST00000504889 EREGO14944 169 aa4.09□□□□□ -1.75
SPOP-208ENST00000504889 PSCAO43653 123 aa4.09□□□□□ -1.75
SPOP-208ENST00000504889 BCL2P10415 239 aa4.09□□□□□ -1.75
SPOP-208ENST00000504889 TAGLN2P37802 199 aaKnown RBP4.09□□□□□ -1.75
SPOP-208ENST00000504889 NKX2-5P52952 324 aaPredicted RBP4.09□□□□□ -1.75
SPOP-208ENST00000504889 BLOC1S1P78537 153 aa4.09□□□□□ -1.75
SPOP-208ENST00000504889 LINC01559Q495D7 138 aa4.09□□□□□ -1.75
SPOP-208ENST00000504889 KCNIP4Q6PIL6 250 aa4.09□□□□□ -1.75
SPOP-208ENST00000504889 WFDC10BQ8IUB3 73 aa4.09□□□□□ -1.75
SPOP-208ENST00000504889 SREK1IP1Q8N9Q2 155 aaPredicted RBP4.09□□□□□ -1.75
SPOP-208ENST00000504889 ATP6V0E2Q8NHE4 81 aa4.09□□□□□ -1.75
SPOP-208ENST00000504889 EIF5A2Q9GZV4 153 aaKnown RBP4.09□□□□□ -1.75
SPOP-208ENST00000504889 PARLQ9H300 379 aa4.09□□□□□ -1.75
SPOP-208ENST00000504889 JPT2Q9H910 190 aa4.09□□□□□ -1.75
SPOP-208ENST00000504889 TRAV1-1A0A0B4J248 108 aa4.08□□□□□ -1.76
SPOP-208ENST00000504889 MUC21A0A0G2JKD1 596 aa4.08□□□□□ -1.76
SPOP-208ENST00000504889 MUC21A0A140T8X8 626 aa4.08□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 68.4 ms