RNA–Protein interactions for RNA: ENST00000504841.6

NPIPB3-203, Transcript of nuclear pore complex interacting protein family member B3, humanhuman

APPRIS P1 TSL 1 (best)

Gene NPIPB3, Length 1,254 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB3-203ENST00000504841 EIF3GO75821 320 aaKnown RBP eCLIP4.49□□□□□ -1.69
NPIPB3-203ENST00000504841 GOLT1AQ6ZVE7 132 aa4.49□□□□□ -1.69
NPIPB3-203ENST00000504841 KRTAP19-1Q8IUB9 90 aa4.49□□□□□ -1.69
NPIPB3-203ENST00000504841 CMTM2Q8TAZ6 248 aa4.49□□□□□ -1.69
NPIPB3-203ENST00000504841 ENKURQ8TC29 256 aa4.49□□□□□ -1.69
NPIPB3-203ENST00000504841 ASB13Q8WXK3 278 aa4.49□□□□□ -1.69
NPIPB3-203ENST00000504841 UBE2WQ96B02 151 aa4.49□□□□□ -1.69
NPIPB3-203ENST00000504841 DAZAP1Q96EP5 407 aaKnown RBP4.49□□□□□ -1.69
NPIPB3-203ENST00000504841 C2orf50Q96LR7 162 aa4.49□□□□□ -1.69
NPIPB3-203ENST00000504841 MARVELD1Q9BSK0 173 aa4.49□□□□□ -1.69
NPIPB3-203ENST00000504841 C11orf1Q9H5F2 150 aa4.49□□□□□ -1.69
NPIPB3-203ENST00000504841 LYRM2Q9NU23 88 aaPredicted RBP4.49□□□□□ -1.69
NPIPB3-203ENST00000504841 KLK12Q9UKR0 248 aa4.49□□□□□ -1.69
NPIPB3-203ENST00000504841 URGCP-MRPS24S4R325 110 aa4.49□□□□□ -1.69
NPIPB3-203ENST00000504841 LRP1Q07954 4544 aaKnown RBP4.48□□□□□ -1.69
NPIPB3-203ENST00000504841 TRAV8-1A0A0A6YYK1 113 aa4.48□□□□□ -1.69
NPIPB3-203ENST00000504841 RNF222A6NCQ9 220 aa4.48□□□□□ -1.69
NPIPB3-203ENST00000504841 MT1HL1P0DM35 61 aa4.48□□□□□ -1.69
NPIPB3-203ENST00000504841 MGST1P10620 155 aaKnown RBP4.48□□□□□ -1.69
NPIPB3-203ENST00000504841 ASIPP42127 132 aa4.48□□□□□ -1.69
NPIPB3-203ENST00000504841 CYCSP99999 105 aaKnown RBP4.48□□□□□ -1.69
NPIPB3-203ENST00000504841 IFITM3Q01628 133 aa4.48□□□□□ -1.69
NPIPB3-203ENST00000504841 IL15RAQ13261 267 aa4.48□□□□□ -1.69
NPIPB3-203ENST00000504841 RAB32Q13637 225 aa4.48□□□□□ -1.69
NPIPB3-203ENST00000504841 ATP6V1FQ16864 119 aa4.48□□□□□ -1.69
NPIPB3-203ENST00000504841 CHAC2Q8WUX2 184 aa4.48□□□□□ -1.69
NPIPB3-203ENST00000504841 SGK494Q96LW2 274 aa4.48□□□□□ -1.69
NPIPB3-203ENST00000504841 SEC22CQ9BRL7 303 aa4.48□□□□□ -1.69
NPIPB3-203ENST00000504841 NMES1Q9C002 83 aa4.48□□□□□ -1.69
NPIPB3-203ENST00000504841 TREM1Q9NP99 234 aa4.48□□□□□ -1.69
NPIPB3-203ENST00000504841 LENEPQ9Y5L5 61 aa4.48□□□□□ -1.69
NPIPB3-203ENST00000504841 COX11Q9Y6N1 276 aa4.48□□□□□ -1.69
NPIPB3-203ENST00000504841 PGPA6NDG6 321 aa4.47□□□□□ -1.69
NPIPB3-203ENST00000504841 PGPEP1LA6NFU8 196 aa4.47□□□□□ -1.69
NPIPB3-203ENST00000504841 INMT-MINDY4F8WBC2 141 aa4.47□□□□□ -1.69
NPIPB3-203ENST00000504841 GNG5P63218 68 aa4.47□□□□□ -1.69
NPIPB3-203ENST00000504841 ZNF506Q5JVG8 444 aa4.47□□□□□ -1.69
NPIPB3-203ENST00000504841 TMEM75Q8N9X5 138 aa4.47□□□□□ -1.69
NPIPB3-203ENST00000504841 OR5C1Q8NGR4 320 aa4.47□□□□□ -1.69
NPIPB3-203ENST00000504841 OR2T35Q8NGX2 323 aa4.47□□□□□ -1.69
NPIPB3-203ENST00000504841 ANAPC16Q96DE5 110 aa4.47□□□□□ -1.69
NPIPB3-203ENST00000504841 TVP23CQ96ET8 276 aa4.47□□□□□ -1.69
NPIPB3-203ENST00000504841 KCNS1Q96KK3 526 aa4.47□□□□□ -1.69
NPIPB3-203ENST00000504841 SAMD10Q9BYL1 202 aa4.47□□□□□ -1.69
NPIPB3-203ENST00000504841 SH3BGRL3Q9H299 93 aa4.47□□□□□ -1.69
NPIPB3-203ENST00000504841 KCNIP2Q9NS61 270 aa4.47□□□□□ -1.69
NPIPB3-203ENST00000504841 CIDEAO60543 219 aa4.46□□□□□ -1.7
NPIPB3-203ENST00000504841 SEC11BP0C7V7 166 aa4.46□□□□□ -1.7
NPIPB3-203ENST00000504841 NHLH2Q02577 135 aa4.46□□□□□ -1.7
NPIPB3-203ENST00000504841 KHDC3LQ587J8 217 aa4.46□□□□□ -1.7
NPIPB3-203ENST00000504841 FFAR4Q5NUL3 377 aa4.46□□□□□ -1.7
NPIPB3-203ENST00000504841 FAM74A1Q5RGS3 127 aa4.46□□□□□ -1.7
NPIPB3-203ENST00000504841 LCE1DQ5T752 114 aa4.46□□□□□ -1.7
NPIPB3-203ENST00000504841 NIT1Q86X76 327 aa4.46□□□□□ -1.7
NPIPB3-203ENST00000504841 CYB561D1Q8N8Q1 229 aa4.46□□□□□ -1.7
NPIPB3-203ENST00000504841 TMED6Q8WW62 240 aa4.46□□□□□ -1.7
NPIPB3-203ENST00000504841 C9orf85Q96MD7 179 aa4.46□□□□□ -1.7
NPIPB3-203ENST00000504841 NDFIP1Q9BT67 221 aa4.46□□□□□ -1.7
NPIPB3-203ENST00000504841 PARLQ9H300 379 aa4.46□□□□□ -1.7
NPIPB3-203ENST00000504841 OTORQ9NRC9 128 aa4.46□□□□□ -1.7
NPIPB3-203ENST00000504841 Q9UF83 564 aa4.46□□□□□ -1.7
NPIPB3-203ENST00000504841 DNAH8Q96JB1 4490 aa4.45□□□□□ -1.7
NPIPB3-203ENST00000504841 A0A087WWC5 75 aa4.45□□□□□ -1.7
NPIPB3-203ENST00000504841 A0A087WX48 190 aa4.45□□□□□ -1.7
NPIPB3-203ENST00000504841 C17orf112F2Z3M2 114 aa4.45□□□□□ -1.7
NPIPB3-203ENST00000504841 PTTG1O95997 202 aa4.45□□□□□ -1.7
NPIPB3-203ENST00000504841 HLA-DQA1P01909 254 aa4.45□□□□□ -1.7
NPIPB3-203ENST00000504841 LINC00694P0DN24 101 aa4.45□□□□□ -1.7
NPIPB3-203ENST00000504841 ZNF80P51504 273 aaPredicted RBP4.45□□□□□ -1.7
NPIPB3-203ENST00000504841 TAS2R45P59539 299 aa4.45□□□□□ -1.7
NPIPB3-203ENST00000504841 LGALSLQ3ZCW2 172 aaPredicted RBP4.45□□□□□ -1.7
NPIPB3-203ENST00000504841 LRRC37A5PQ49AS3 106 aa4.45□□□□□ -1.7
NPIPB3-203ENST00000504841 C14orf177Q52M58 125 aa4.45□□□□□ -1.7
NPIPB3-203ENST00000504841 KCNIP4Q6PIL6 250 aa4.45□□□□□ -1.7
NPIPB3-203ENST00000504841 C14orf178Q8N769 122 aaPredicted RBP4.45□□□□□ -1.7
NPIPB3-203ENST00000504841 C1orf43Q9BWL3 253 aa4.45□□□□□ -1.7
NPIPB3-203ENST00000504841 WDR61Q9GZS3 305 aaKnown RBP4.45□□□□□ -1.7
NPIPB3-203ENST00000504841 AP5S1Q9NUS5 200 aa4.45□□□□□ -1.7
NPIPB3-203ENST00000504841 C11orf21Q9P2W6 132 aa4.45□□□□□ -1.7
NPIPB3-203ENST00000504841 USP17L23D6RBM5 183 aa4.44□□□□□ -1.7
NPIPB3-203ENST00000504841 GCGP01275 180 aa4.44□□□□□ -1.7
NPIPB3-203ENST00000504841 CRPP02741 224 aa4.44□□□□□ -1.7
NPIPB3-203ENST00000504841 PET100P0DJ07 73 aa4.44□□□□□ -1.7
NPIPB3-203ENST00000504841 S100A4P26447 101 aaKnown RBP4.44□□□□□ -1.7
NPIPB3-203ENST00000504841 ODF1Q14990 250 aa4.44□□□□□ -1.7
NPIPB3-203ENST00000504841 KRTAP4-2Q9BYR5 136 aa4.44□□□□□ -1.7
NPIPB3-203ENST00000504841 DPH3P1Q9H4G8 78 aa4.44□□□□□ -1.7
NPIPB3-203ENST00000504841 JPT2Q9H910 190 aa4.44□□□□□ -1.7
NPIPB3-203ENST00000504841 MBD2Q9UBB5 411 aa4.44□□□□□ -1.7
NPIPB3-203ENST00000504841 FAT3Q8TDW7 4589 aa4.43□□□□□ -1.7
NPIPB3-203ENST00000504841 A0A0D9SG52 128 aa4.43□□□□□ -1.7
NPIPB3-203ENST00000504841 A8MWV9 139 aa4.43□□□□□ -1.7
NPIPB3-203ENST00000504841 TMEM262E9PQX1 116 aa4.43□□□□□ -1.7
NPIPB3-203ENST00000504841 PANO1I0J062 215 aa4.43□□□□□ -1.7
NPIPB3-203ENST00000504841 TAAR5O14804 337 aa4.43□□□□□ -1.7
NPIPB3-203ENST00000504841 HMGB3O15347 200 aaKnown RBP4.43□□□□□ -1.7
NPIPB3-203ENST00000504841 SSNA1O43805 119 aa4.43□□□□□ -1.7
NPIPB3-203ENST00000504841 RNASE3P12724 160 aaKnown RBP4.43□□□□□ -1.7
NPIPB3-203ENST00000504841 FGF8P55075 233 aaPredicted RBP4.43□□□□□ -1.7
NPIPB3-203ENST00000504841 ELOBQ15370 118 aa4.43□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms