RNA–Protein interactions for RNA: ENST00000504489.3

PDLIM5-208, Transcript of PDZ and LIM domain 5, humanhuman

TSL 4 BASIC

Gene PDLIM5, Length 538 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-208ENST00000504489 C19orf71A6NCJ1 209 aa8.41□□□□□ -1.06
PDLIM5-208ENST00000504489 ZNF727A8MUV8 499 aa8.41□□□□□ -1.06
PDLIM5-208ENST00000504489 ATP5G1P05496 136 aa8.41□□□□□ -1.06
PDLIM5-208ENST00000504489 S100A4P26447 101 aaKnown RBP8.41□□□□□ -1.06
PDLIM5-208ENST00000504489 FAM74A3Q4VXF1 159 aa8.41□□□□□ -1.06
PDLIM5-208ENST00000504489 PTH2Q96A98 100 aa8.41□□□□□ -1.06
PDLIM5-208ENST00000504489 DAZAP1Q96EP5 407 aaKnown RBP8.41□□□□□ -1.06
PDLIM5-208ENST00000504489 SMIM7Q9BQ49 75 aa8.41□□□□□ -1.06
PDLIM5-208ENST00000504489 MRPL16Q9NX20 251 aaKnown RBP8.41□□□□□ -1.06
PDLIM5-208ENST00000504489 IL36BQ9NZH7 164 aa8.41□□□□□ -1.06
PDLIM5-208ENST00000504489 TRGV2A0A075B6R0 118 aa8.4□□□□□ -1.06
PDLIM5-208ENST00000504489 K7EN84 100 aa8.4□□□□□ -1.06
PDLIM5-208ENST00000504489 OR5I1Q13606 314 aa8.4□□□□□ -1.06
PDLIM5-208ENST00000504489 FAM210BQ96KR6 192 aa8.4□□□□□ -1.06
PDLIM5-208ENST00000504489 NDUFAF3Q9BU61 184 aa8.4□□□□□ -1.06
PDLIM5-208ENST00000504489 DYNC2H1Q8NCM8 4307 aaKnown RBP8.4□□□□□ -1.07
PDLIM5-208ENST00000504489 TMSB15BA0A087X1C1 80 aa8.39□□□□□ -1.07
PDLIM5-208ENST00000504489 GRIFINA4D1Z8 144 aa8.39□□□□□ -1.07
PDLIM5-208ENST00000504489 ARMS2P0C7Q2 107 aa8.39□□□□□ -1.07
PDLIM5-208ENST00000504489 MED14OSP0DP75 135 aa8.39□□□□□ -1.07
PDLIM5-208ENST00000504489 HTN3P15516 51 aa8.39□□□□□ -1.07
PDLIM5-208ENST00000504489 TCTAP57738 103 aa8.39□□□□□ -1.07
PDLIM5-208ENST00000504489 RPS20P60866 119 aaKnown RBP8.39□□□□□ -1.07
PDLIM5-208ENST00000504489 RPL19P84098 196 aaKnown RBP8.39□□□□□ -1.07
PDLIM5-208ENST00000504489 PIK3CD-AS1Q5SR53 167 aa8.39□□□□□ -1.07
PDLIM5-208ENST00000504489 SCRT2Q9NQ03 307 aa8.39□□□□□ -1.07
PDLIM5-208ENST00000504489 STARD9Q9P2P6 4700 aa8.39□□□□□ -1.07
PDLIM5-208ENST00000504489 IGLL5B9A064 214 aa8.38□□□□□ -1.07
PDLIM5-208ENST00000504489 F5H768 121 aa8.38□□□□□ -1.07
PDLIM5-208ENST00000504489 H3BVH4 76 aa8.38□□□□□ -1.07
PDLIM5-208ENST00000504489 P01737 135 aa8.38□□□□□ -1.07
PDLIM5-208ENST00000504489 TMEM241Q24JQ0 296 aa8.38□□□□□ -1.07
PDLIM5-208ENST00000504489 ZNF876PQ49A33 203 aa8.38□□□□□ -1.07
PDLIM5-208ENST00000504489 LINC01551Q86U37 167 aa8.38□□□□□ -1.07
PDLIM5-208ENST00000504489 NUDT10Q8NFP7 164 aa8.38□□□□□ -1.07
PDLIM5-208ENST00000504489 OR2D3Q8NGH3 330 aa8.38□□□□□ -1.07
PDLIM5-208ENST00000504489 NUDT11Q96G61 164 aa8.38□□□□□ -1.07
PDLIM5-208ENST00000504489 IGHV4-4A0A075B6R2 117 aa8.37□□□□□ -1.07
PDLIM5-208ENST00000504489 TRAV4A0A0B4J268 109 aa8.37□□□□□ -1.07
PDLIM5-208ENST00000504489 XKRY2A2RUG3 117 aa8.37□□□□□ -1.07
PDLIM5-208ENST00000504489 SOHLH1Q5JUK2 328 aa8.37□□□□□ -1.07
PDLIM5-208ENST00000504489 FAM231DQ6ZW35 169 aa8.37□□□□□ -1.07
PDLIM5-208ENST00000504489 POM121L12Q8N7R1 296 aa8.37□□□□□ -1.07
PDLIM5-208ENST00000504489 APLNQ9ULZ1 77 aa8.37□□□□□ -1.07
PDLIM5-208ENST00000504489 SNAI2O43623 268 aa8.36□□□□□ -1.07
PDLIM5-208ENST00000504489 CIDEAO60543 219 aa8.36□□□□□ -1.07
PDLIM5-208ENST00000504489 OR5AL1P0C617 328 aa8.36□□□□□ -1.07
PDLIM5-208ENST00000504489 HOXA5P20719 270 aa8.36□□□□□ -1.07
PDLIM5-208ENST00000504489 TMEM88Q6PEY1 159 aa8.36□□□□□ -1.07
PDLIM5-208ENST00000504489 SYT8Q8NBV8 401 aa8.36□□□□□ -1.07
PDLIM5-208ENST00000504489 RNASE7Q9H1E1 156 aaKnown RBP8.36□□□□□ -1.07
PDLIM5-208ENST00000504489 NAT8Q9UHE5 227 aa8.36□□□□□ -1.07
PDLIM5-208ENST00000504489 PHLDA3Q9Y5J5 127 aa8.36□□□□□ -1.07
PDLIM5-208ENST00000504489 A8MWV9 139 aa8.35□□□□□ -1.07
PDLIM5-208ENST00000504489 H3BNG1 76 aa8.35□□□□□ -1.07
PDLIM5-208ENST00000504489 RS1O15537 224 aa8.35□□□□□ -1.07
PDLIM5-208ENST00000504489 IGHV3-53P01767 116 aa8.35□□□□□ -1.07
PDLIM5-208ENST00000504489 IGLC6P0CF74 106 aa8.35□□□□□ -1.07
PDLIM5-208ENST00000504489 RPL23P62829 140 aaKnown RBP8.35□□□□□ -1.07
PDLIM5-208ENST00000504489 SLAQ13239 276 aa8.35□□□□□ -1.07
PDLIM5-208ENST00000504489 FHL2Q14192 279 aa8.35□□□□□ -1.07
PDLIM5-208ENST00000504489 UQCC3Q6UW78 93 aa8.35□□□□□ -1.07
PDLIM5-208ENST00000504489 OR4C5Q8NGB2 326 aa8.35□□□□□ -1.07
PDLIM5-208ENST00000504489 ZNF479Q96JC4 524 aa8.35□□□□□ -1.07
PDLIM5-208ENST00000504489 RPP21Q9H633 154 aaKnown RBP8.35□□□□□ -1.07
PDLIM5-208ENST00000504489 OSTCQ9NRP0 149 aa8.35□□□□□ -1.07
PDLIM5-208ENST00000504489 LINC00862A6NCI5 91 aa8.34□□□□□ -1.07
PDLIM5-208ENST00000504489 GATCO43716 136 aaKnown RBP8.34□□□□□ -1.07
PDLIM5-208ENST00000504489 NXPH4O95158 308 aa8.34□□□□□ -1.07
PDLIM5-208ENST00000504489 SFTA3P0C7M3 94 aa8.34□□□□□ -1.07
PDLIM5-208ENST00000504489 GZMBP10144 247 aa8.34□□□□□ -1.07
PDLIM5-208ENST00000504489 ERVFC1-1P60608 527 aa8.34□□□□□ -1.07
PDLIM5-208ENST00000504489 CFAP126Q5VTH2 177 aa8.34□□□□□ -1.07
PDLIM5-208ENST00000504489 CDPF1Q6NVV7 123 aa8.34□□□□□ -1.07
PDLIM5-208ENST00000504489 ZFP82Q8N141 532 aa8.34□□□□□ -1.07
PDLIM5-208ENST00000504489 FER1L6-AS1Q8NA97 138 aa8.34□□□□□ -1.07
PDLIM5-208ENST00000504489 C15orf53Q8NAA6 179 aa8.34□□□□□ -1.07
PDLIM5-208ENST00000504489 ISOC2Q96AB3 205 aa8.34□□□□□ -1.07
PDLIM5-208ENST00000504489 TRAV26-1A0A087WT03 109 aa8.33□□□□□ -1.08
PDLIM5-208ENST00000504489 TRGV4A0A0C4DH28 118 aa8.33□□□□□ -1.08
PDLIM5-208ENST00000504489 A0A1W2PPQ1 181 aa8.33□□□□□ -1.08
PDLIM5-208ENST00000504489 A8MWL6 223 aa8.33□□□□□ -1.08
PDLIM5-208ENST00000504489 F2Z2F3 143 aa8.33□□□□□ -1.08
PDLIM5-208ENST00000504489 CT83Q5H943 113 aa8.33□□□□□ -1.08
PDLIM5-208ENST00000504489 OR10AG1Q8NH19 301 aa8.33□□□□□ -1.08
PDLIM5-208ENST00000504489 PRO0255Q9UI72 69 aa8.33□□□□□ -1.08
PDLIM5-208ENST00000504489 M0R381 172 aa8.32□□□□□ -1.08
PDLIM5-208ENST00000504489 CRYBA4P53673 196 aa8.32□□□□□ -1.08
PDLIM5-208ENST00000504489 ADIRFQ15847 76 aa8.32□□□□□ -1.08
PDLIM5-208ENST00000504489 WDR73Q6P4I2 378 aa8.32□□□□□ -1.08
PDLIM5-208ENST00000504489 ZFP2Q6ZN57 461 aa8.32□□□□□ -1.08
PDLIM5-208ENST00000504489 C15orf54Q8N8G6 183 aa8.32□□□□□ -1.08
PDLIM5-208ENST00000504489 SFRP2Q96HF1 295 aa8.32□□□□□ -1.08
PDLIM5-208ENST00000504489 VSIG2Q96IQ7 327 aa8.32□□□□□ -1.08
PDLIM5-208ENST00000504489 KRTAP9-2Q9BYQ4 174 aa8.32□□□□□ -1.08
PDLIM5-208ENST00000504489 JPT2Q9H910 190 aa8.32□□□□□ -1.08
PDLIM5-208ENST00000504489 HHLA3Q9XRX5 114 aa8.32□□□□□ -1.08
PDLIM5-208ENST00000504489 PAX4O43316 350 aa8.31□□□□□ -1.08
PDLIM5-208ENST00000504489 GATA1P15976 413 aaPredicted RBP8.31□□□□□ -1.08
PDLIM5-208ENST00000504489 CTRLP40313 264 aa8.31□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 105.4 ms