RNA–Protein interactions for RNA: ENST00000504387.5

NEDD9-208, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene NEDD9, Length 3,211 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-208ENST00000504387 TCTEX1D4Q5JR98 221 aa5.85□□□□□ -1.47
NEDD9-208ENST00000504387 ZFAND6Q6FIF0 208 aa5.85□□□□□ -1.47
NEDD9-208ENST00000504387 SHISA2Q6UWI4 295 aa5.85□□□□□ -1.47
NEDD9-208ENST00000504387 LYPD1Q8N2G4 141 aa5.85□□□□□ -1.47
NEDD9-208ENST00000504387 A0A087WWL8 130 aa5.84□□□□□ -1.47
NEDD9-208ENST00000504387 GNRH2O43555 120 aa5.84□□□□□ -1.47
NEDD9-208ENST00000504387 CEACAM4O75871 244 aa5.84□□□□□ -1.47
NEDD9-208ENST00000504387 CTSGP08311 255 aa5.84□□□□□ -1.47
NEDD9-208ENST00000504387 HERV-K104P63124 156 aa5.84□□□□□ -1.47
NEDD9-208ENST00000504387 C15orf32Q32M92 178 aa5.84□□□□□ -1.47
NEDD9-208ENST00000504387 NRACQ8N912 160 aa5.84□□□□□ -1.47
NEDD9-208ENST00000504387 NUP37Q8NFH4 326 aa5.84□□□□□ -1.47
NEDD9-208ENST00000504387 TIMD4Q96H15 378 aa5.84□□□□□ -1.47
NEDD9-208ENST00000504387 CRYBG3Q68DQ2 2970 aa5.84□□□□□ -1.47
NEDD9-208ENST00000504387 POLQO75417 2590 aa5.84□□□□□ -1.47
NEDD9-208ENST00000504387 IGLV2-18A0A075B6J9 118 aa5.84□□□□□ -1.47
NEDD9-208ENST00000504387 F8W735 103 aaPredicted RBP5.84□□□□□ -1.47
NEDD9-208ENST00000504387 IGKV3-20P01619 116 aa5.84□□□□□ -1.47
NEDD9-208ENST00000504387 PRSS2P07478 247 aa5.84□□□□□ -1.47
NEDD9-208ENST00000504387 PLNP26678 52 aa5.84□□□□□ -1.47
NEDD9-208ENST00000504387 PRR9Q5T870 116 aa5.84□□□□□ -1.47
NEDD9-208ENST00000504387 GATD1Q8NB37 220 aa5.84□□□□□ -1.47
NEDD9-208ENST00000504387 NTN5Q8WTR8 489 aaPredicted RBP5.84□□□□□ -1.47
NEDD9-208ENST00000504387 RASL10AQ92737 203 aa5.84□□□□□ -1.47
NEDD9-208ENST00000504387 LINC00477Q96M19 166 aa5.84□□□□□ -1.47
NEDD9-208ENST00000504387 DPM3Q9P2X0 92 aa5.84□□□□□ -1.47
NEDD9-208ENST00000504387 ZNF256Q9Y2P7 627 aaPredicted RBP5.84□□□□□ -1.47
NEDD9-208ENST00000504387 TLN2Q9Y4G6 2542 aa5.84□□□□□ -1.47
NEDD9-208ENST00000504387 PTPN13Q12923 2485 aa5.84□□□□□ -1.48
NEDD9-208ENST00000504387 C11orf86A6NJI1 115 aa5.84□□□□□ -1.48
NEDD9-208ENST00000504387 SHISA9B4DS77 424 aa5.84□□□□□ -1.48
NEDD9-208ENST00000504387 BAALCQ8WXS3 180 aa5.84□□□□□ -1.48
NEDD9-208ENST00000504387 UBTD1Q9HAC8 227 aa5.84□□□□□ -1.48
NEDD9-208ENST00000504387 PHLDA3Q9Y5J5 127 aa5.84□□□□□ -1.48
NEDD9-208ENST00000504387 LINC00311Q8N616 119 aa5.83□□□□□ -1.48
NEDD9-208ENST00000504387 PPDPFLQ8WWR9 84 aa5.83□□□□□ -1.48
NEDD9-208ENST00000504387 C16orf92Q96LL3 132 aa5.83□□□□□ -1.48
NEDD9-208ENST00000504387 SMIM2Q9BVW6 85 aa5.83□□□□□ -1.48
NEDD9-208ENST00000504387 COL27A1Q8IZC6 1860 aaPredicted RBP5.83□□□□□ -1.48
NEDD9-208ENST00000504387 RNASE4P34096 147 aaKnown RBP5.83□□□□□ -1.48
NEDD9-208ENST00000504387 SUMO2P61956 95 aaKnown RBP5.83□□□□□ -1.48
NEDD9-208ENST00000504387 TCF15Q12870 199 aa5.83□□□□□ -1.48
NEDD9-208ENST00000504387 TTC32Q5I0X7 151 aa5.83□□□□□ -1.48
NEDD9-208ENST00000504387 Q6ZSV7 163 aa5.83□□□□□ -1.48
NEDD9-208ENST00000504387 TMEM219Q86XT9 240 aa5.83□□□□□ -1.48
NEDD9-208ENST00000504387 ZNF580Q9UK33 172 aa5.83□□□□□ -1.48
NEDD9-208ENST00000504387 ERG28Q9UKR5 140 aa5.83□□□□□ -1.48
NEDD9-208ENST00000504387 ACACBO00763 2458 aa5.83□□□□□ -1.48
NEDD9-208ENST00000504387 TEX49A0A1B0GTD5 131 aa5.82□□□□□ -1.48
NEDD9-208ENST00000504387 B9A039 149 aa5.82□□□□□ -1.48
NEDD9-208ENST00000504387 SNCGO76070 127 aa5.82□□□□□ -1.48
NEDD9-208ENST00000504387 ELANEP08246 267 aa5.82□□□□□ -1.48
NEDD9-208ENST00000504387 ZNF688P0C7X2 276 aa5.82□□□□□ -1.48
NEDD9-208ENST00000504387 HTN1P15515 57 aa5.82□□□□□ -1.48
NEDD9-208ENST00000504387 TSPEAR-AS2P59090 65 aa5.82□□□□□ -1.48
NEDD9-208ENST00000504387 GAGE2BQ13066 116 aa5.82□□□□□ -1.48
NEDD9-208ENST00000504387 GAGE2EQ4V326 116 aa5.82□□□□□ -1.48
NEDD9-208ENST00000504387 TEN1Q86WV5 123 aa5.82□□□□□ -1.48
NEDD9-208ENST00000504387 OR11H6Q8NGC7 330 aa5.82□□□□□ -1.48
NEDD9-208ENST00000504387 GAGE2DQ9UEU5 116 aa5.82□□□□□ -1.48
NEDD9-208ENST00000504387 A6NJY4 79 aa5.82□□□□□ -1.48
NEDD9-208ENST00000504387 CFC1BP0CG36 223 aa5.82□□□□□ -1.48
NEDD9-208ENST00000504387 CFC1P0CG37 223 aa5.82□□□□□ -1.48
NEDD9-208ENST00000504387 PDE6HQ13956 83 aa5.82□□□□□ -1.48
NEDD9-208ENST00000504387 C5orf64Q2M2E5 130 aa5.82□□□□□ -1.48
NEDD9-208ENST00000504387 TMEM30BQ3MIR4 351 aa5.82□□□□□ -1.48
NEDD9-208ENST00000504387 RNASE13Q5GAN3 156 aaKnown RBP5.82□□□□□ -1.48
NEDD9-208ENST00000504387 NDUFA11Q86Y39 141 aa5.82□□□□□ -1.48
NEDD9-208ENST00000504387 TP53TG1Q9Y2A0 90 aa5.82□□□□□ -1.48
NEDD9-208ENST00000504387 HIVEP3Q5T1R4 2406 aa5.82□□□□□ -1.48
NEDD9-208ENST00000504387 IGHV7-4-1A0A0J9YVY3 117 aa5.82□□□□□ -1.48
NEDD9-208ENST00000504387 A0A0U1RRA0 63 aa5.82□□□□□ -1.48
NEDD9-208ENST00000504387 SLC25A20O43772 301 aa5.82□□□□□ -1.48
NEDD9-208ENST00000504387 GAGE5Q13069 117 aa5.82□□□□□ -1.48
NEDD9-208ENST00000504387 GAGE6Q13070 117 aa5.82□□□□□ -1.48
NEDD9-208ENST00000504387 RAB1BQ9H0U4 201 aa5.82□□□□□ -1.48
NEDD9-208ENST00000504387 MSRB2Q9Y3D2 182 aa5.82□□□□□ -1.48
NEDD9-208ENST00000504387 MYO9AB2RTY4 2548 aa5.81□□□□□ -1.48
NEDD9-208ENST00000504387 TRBV6-1A0A0K0K1D8 114 aa5.81□□□□□ -1.48
NEDD9-208ENST00000504387 A4D1N5 150 aa5.81□□□□□ -1.48
NEDD9-208ENST00000504387 IGLV11-55A0A075B6I3 123 aa5.81□□□□□ -1.48
NEDD9-208ENST00000504387 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa5.81□□□□□ -1.48
NEDD9-208ENST00000504387 Q8NA96 180 aa5.81□□□□□ -1.48
NEDD9-208ENST00000504387 IGHV3-11P01762 117 aa5.8□□□□□ -1.48
NEDD9-208ENST00000504387 LY6EQ16553 131 aa5.8□□□□□ -1.48
NEDD9-208ENST00000504387 FAM159AQ6UWV7 190 aa5.8□□□□□ -1.48
NEDD9-208ENST00000504387 IGFL3Q6UXB1 125 aa5.8□□□□□ -1.48
NEDD9-208ENST00000504387 BSNQ9UPA5 3926 aa5.8□□□□□ -1.48
NEDD9-208ENST00000504387 WNK1Q9H4A3 2382 aa5.8□□□□□ -1.48
NEDD9-208ENST00000504387 CDSNQ15517 529 aa5.8□□□□□ -1.48
NEDD9-208ENST00000504387 TAL2Q16559 108 aa5.8□□□□□ -1.48
NEDD9-208ENST00000504387 NEXN-AS1Q8NBZ9 246 aa5.8□□□□□ -1.48
NEDD9-208ENST00000504387 ZFYVE26Q68DK2 2539 aa5.8□□□□□ -1.48
NEDD9-208ENST00000504387 MYO18BQ8IUG5 2567 aa5.8□□□□□ -1.48
NEDD9-208ENST00000504387 LINC01559Q495D7 138 aa5.8□□□□□ -1.48
NEDD9-208ENST00000504387 VMO1Q7Z5L0 202 aa5.8□□□□□ -1.48
NEDD9-208ENST00000504387 VPS13CQ709C8 3753 aa5.79□□□□□ -1.48
NEDD9-208ENST00000504387 USP9XQ93008 2570 aaPredicted RBP5.79□□□□□ -1.48
NEDD9-208ENST00000504387 A0A0J9YY99 117 aa5.79□□□□□ -1.48
NEDD9-208ENST00000504387 BUB3O43684 328 aa5.79□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms