RNA–Protein interactions for RNA: ENST00000504157.5

POLR2J3-209, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 2

Gene POLR2J3, Length 2,211 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-209ENST00000504157 ATXN8Q156A1 80 aa13.62□□□□□ -0.23
POLR2J3-209ENST00000504157 LINC01620Q4KN68 170 aa13.62□□□□□ -0.23
POLR2J3-209ENST00000504157 SLC50A1Q9BRV3 221 aa13.62□□□□□ -0.23
POLR2J3-209ENST00000504157 C11orf21Q9P2W6 132 aa13.62□□□□□ -0.23
POLR2J3-209ENST00000504157 S4R3C0 116 aa13.62□□□□□ -0.23
POLR2J3-209ENST00000504157 ICE1Q9Y2F5 2266 aa13.61□□□□□ -0.23
POLR2J3-209ENST00000504157 C2orf66Q6UXQ4 117 aa13.61□□□□□ -0.23
POLR2J3-209ENST00000504157 CEP295Q9C0D2 2601 aa13.61□□□□□ -0.23
POLR2J3-209ENST00000504157 PRRC2CQ9Y520 2896 aaKnown RBP13.61□□□□□ -0.23
POLR2J3-209ENST00000504157 DUSP14O95147 198 aaKnown RBP13.6□□□□□ -0.23
POLR2J3-209ENST00000504157 COX7A1P24310 79 aa13.6□□□□□ -0.23
POLR2J3-209ENST00000504157 SUMO2P61956 95 aaKnown RBP13.6□□□□□ -0.23
POLR2J3-209ENST00000504157 PAPPA-AS1Q5QFB9 102 aa13.6□□□□□ -0.23
POLR2J3-209ENST00000504157 IGFL4Q6B9Z1 124 aa13.6□□□□□ -0.23
POLR2J3-209ENST00000504157 LAMA5O15230 3695 aa13.6□□□□□ -0.23
POLR2J3-209ENST00000504157 LOC400499M0QZD8 3231 aa13.6□□□□□ -0.23
POLR2J3-209ENST00000504157 TMEM263Q8WUH6 116 aaKnown RBP13.6□□□□□ -0.23
POLR2J3-209ENST00000504157 DNAJC30Q96LL9 226 aa13.6□□□□□ -0.23
POLR2J3-209ENST00000504157 MSRB2Q9Y3D2 182 aa13.6□□□□□ -0.23
POLR2J3-209ENST00000504157 TRBV10-2A0A0K0K1G8 114 aa13.59□□□□□ -0.23
POLR2J3-209ENST00000504157 CSDC2Q9Y534 153 aaKnown RBP13.59□□□□□ -0.23
POLR2J3-209ENST00000504157 A0A0B4J2C4 111 aa13.59□□□□□ -0.23
POLR2J3-209ENST00000504157 C11orf86A6NJI1 115 aa13.59□□□□□ -0.23
POLR2J3-209ENST00000504157 PRAC2D3DTV9 90 aa13.59□□□□□ -0.23
POLR2J3-209ENST00000504157 H3BMM0 161 aa13.59□□□□□ -0.23
POLR2J3-209ENST00000504157 EIF4EBP3O60516 100 aaPredicted RBP13.59□□□□□ -0.23
POLR2J3-209ENST00000504157 CRYGDP07320 174 aa13.59□□□□□ -0.23
POLR2J3-209ENST00000504157 CTSGP08311 255 aa13.59□□□□□ -0.23
POLR2J3-209ENST00000504157 UBE2WQ96B02 151 aa13.59□□□□□ -0.23
POLR2J3-209ENST00000504157 CHCHD5Q9BSY4 110 aa13.59□□□□□ -0.23
POLR2J3-209ENST00000504157 DMXL2Q8TDJ6 3036 aa13.58□□□□□ -0.24
POLR2J3-209ENST00000504157 IGLV4-69A0A075B6H9 119 aa13.58□□□□□ -0.24
POLR2J3-209ENST00000504157 TRBV7-7A0A0K0K1E9 115 aa13.58□□□□□ -0.24
POLR2J3-209ENST00000504157 PRB3Q04118 309 aaPredicted RBP13.58□□□□□ -0.24
POLR2J3-209ENST00000504157 FAM240AA0A1B0GVK7 77 aa13.58□□□□□ -0.24
POLR2J3-209ENST00000504157 C5orf47Q569G3 176 aa13.58□□□□□ -0.24
POLR2J3-209ENST00000504157 SPANXN1Q5VSR9 72 aa13.58□□□□□ -0.24
POLR2J3-209ENST00000504157 IGFL3Q6UXB1 125 aa13.58□□□□□ -0.24
POLR2J3-209ENST00000504157 SPENQ96T58 3664 aaKnown RBP13.57□□□□□ -0.24
POLR2J3-209ENST00000504157 A4D1N5 150 aa13.57□□□□□ -0.24
POLR2J3-209ENST00000504157 MRPL53Q96EL3 112 aaKnown RBP13.57□□□□□ -0.24
POLR2J3-209ENST00000504157 AMELXQ99217 191 aa13.57□□□□□ -0.24
POLR2J3-209ENST00000504157 DYNLRB1Q9NP97 96 aa13.57□□□□□ -0.24
POLR2J3-209ENST00000504157 M0R2P5 195 aa13.56□□□□□ -0.24
POLR2J3-209ENST00000504157 TSPEAR-AS2P59090 65 aa13.56□□□□□ -0.24
POLR2J3-209ENST00000504157 ELANEP08246 267 aa13.56□□□□□ -0.24
POLR2J3-209ENST00000504157 DEFB109BQ30KR1 87 aa13.55□□□□□ -0.24
POLR2J3-209ENST00000504157 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa13.55□□□□□ -0.24
POLR2J3-209ENST00000504157 DPM3Q9P2X0 92 aa13.55□□□□□ -0.24
POLR2J3-209ENST00000504157 APC2O95996 2303 aa13.55□□□□□ -0.24
POLR2J3-209ENST00000504157 ATP5J2P56134 94 aa13.55□□□□□ -0.24
POLR2J3-209ENST00000504157 AGPAT4-IT1Q9H0P7 198 aa13.55□□□□□ -0.24
POLR2J3-209ENST00000504157 NCOR2Q9Y618 2525 aa13.54□□□□□ -0.24
POLR2J3-209ENST00000504157 RNF223E7ERA6 249 aa13.54□□□□□ -0.24
POLR2J3-209ENST00000504157 C3orf56Q8N813 242 aa13.54□□□□□ -0.24
POLR2J3-209ENST00000504157 ACACAQ13085 2346 aa13.54□□□□□ -0.24
POLR2J3-209ENST00000504157 BUB3O43684 328 aa13.53□□□□□ -0.24
POLR2J3-209ENST00000504157 LINC00694P0DN24 101 aa13.53□□□□□ -0.24
POLR2J3-209ENST00000504157 LY6G5BQ8NDX9 201 aa13.53□□□□□ -0.24
POLR2J3-209ENST00000504157 TRBV30A0A0K0K1B3 111 aa13.52□□□□□ -0.24
POLR2J3-209ENST00000504157 TSHBP01222 138 aa13.52□□□□□ -0.24
POLR2J3-209ENST00000504157 NDPQ00604 133 aa13.52□□□□□ -0.24
POLR2J3-209ENST00000504157 EBI3Q14213 229 aa13.52□□□□□ -0.24
POLR2J3-209ENST00000504157 ZNF56Q15929 161 aa13.52□□□□□ -0.24
POLR2J3-209ENST00000504157 DEFB121Q5J5C9 76 aa13.52□□□□□ -0.24
POLR2J3-209ENST00000504157 C9orf47Q6ZRZ4 202 aa13.52□□□□□ -0.25
POLR2J3-209ENST00000504157 RPL39LQ96EH5 51 aaKnown RBP13.52□□□□□ -0.25
POLR2J3-209ENST00000504157 SPXQ9BT56 116 aa13.52□□□□□ -0.25
POLR2J3-209ENST00000504157 ZFAND3Q9H8U3 227 aa13.52□□□□□ -0.25
POLR2J3-209ENST00000504157 IGHV1-69DA0A0B4J2H0 117 aa13.51□□□□□ -0.25
POLR2J3-209ENST00000504157 H7C2G1 150 aa13.51□□□□□ -0.25
POLR2J3-209ENST00000504157 M0R381 172 aa13.51□□□□□ -0.25
POLR2J3-209ENST00000504157 IGHV4-39P01824 125 aa13.51□□□□□ -0.25
POLR2J3-209ENST00000504157 ZGRF1Q86YA3 2104 aa13.51□□□□□ -0.25
POLR2J3-209ENST00000504157 RNF182Q8N6D2 247 aa13.51□□□□□ -0.25
POLR2J3-209ENST00000504157 TRAV16A0A0A6YYK6 109 aaPredicted RBP13.51□□□□□ -0.25
POLR2J3-209ENST00000504157 E7EQL1 145 aa13.51□□□□□ -0.25
POLR2J3-209ENST00000504157 J3QQQ9 107 aa13.51□□□□□ -0.25
POLR2J3-209ENST00000504157 IGHV3-23P01764 117 aa13.51□□□□□ -0.25
POLR2J3-209ENST00000504157 HES1Q14469 280 aa13.51□□□□□ -0.25
POLR2J3-209ENST00000504157 PMVKQ15126 192 aa13.51□□□□□ -0.25
POLR2J3-209ENST00000504157 KLK9Q2XQG4 91 aa13.51□□□□□ -0.25
POLR2J3-209ENST00000504157 C2orf82Q6UX34 121 aa13.51□□□□□ -0.25
POLR2J3-209ENST00000504157 IMUPQ9GZP8 106 aa13.51□□□□□ -0.25
POLR2J3-209ENST00000504157 KLK9Q9UKQ9 250 aa13.51□□□□□ -0.25
POLR2J3-209ENST00000504157 CACNA1AO00555 2505 aa13.5□□□□□ -0.25
POLR2J3-209ENST00000504157 A0A0G2JNJ9 132 aa13.5□□□□□ -0.25
POLR2J3-209ENST00000504157 H3BT86 120 aa13.5□□□□□ -0.25
POLR2J3-209ENST00000504157 C14orf178Q8N769 122 aaPredicted RBP13.5□□□□□ -0.25
POLR2J3-209ENST00000504157 TMEM101Q96IK0 257 aa13.5□□□□□ -0.25
POLR2J3-209ENST00000504157 SPANXDQ9BXN6 97 aa13.5□□□□□ -0.25
POLR2J3-209ENST00000504157 Q9UFV3 132 aa13.5□□□□□ -0.25
POLR2J3-209ENST00000504157 POM121L12Q8N7R1 296 aa13.49□□□□□ -0.25
POLR2J3-209ENST00000504157 IGIPA6NJ69 53 aa13.49□□□□□ -0.25
POLR2J3-209ENST00000504157 ODF3BA8MYP8 253 aa13.49□□□□□ -0.25
POLR2J3-209ENST00000504157 EMP1P54849 157 aa13.49□□□□□ -0.25
POLR2J3-209ENST00000504157 IGF2RP11717 2491 aa13.48□□□□□ -0.25
POLR2J3-209ENST00000504157 H7C423 109 aa13.48□□□□□ -0.25
POLR2J3-209ENST00000504157 NDUFA7O95182 113 aa13.48□□□□□ -0.25
POLR2J3-209ENST00000504157 LGALS3P17931 250 aaKnown RBP13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms