RNA–Protein interactions for RNA: ENST00000503060.5

USP46-204, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 5

Gene USP46, Length 2,437 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-204ENST00000503060 ZNF80P51504 273 aaPredicted RBP8.82□□□□□ -1
USP46-204ENST00000503060 TDRG1Q3Y452 100 aa8.82□□□□□ -1
USP46-204ENST00000503060 Q96MF0 132 aa8.82□□□□□ -1
USP46-204ENST00000503060 POLQO75417 2590 aa8.81□□□□□ -1
USP46-204ENST00000503060 TMSB15BA0A087X1C1 80 aa8.81□□□□□ -1
USP46-204ENST00000503060 CD164Q04900 197 aa8.81□□□□□ -1
USP46-204ENST00000503060 CSPG4Q6UVK1 2322 aa8.81□□□□□ -1
USP46-204ENST00000503060 CRYBG3Q68DQ2 2970 aa8.81□□□□□ -1
USP46-204ENST00000503060 C9JAW5 83 aa8.81□□□□□ -1
USP46-204ENST00000503060 ZNF324O75467 553 aaPredicted RBP8.81□□□□□ -1
USP46-204ENST00000503060 PMVKQ15126 192 aa8.81□□□□□ -1
USP46-204ENST00000503060 C9orf139Q6ZV77 190 aa8.81□□□□□ -1
USP46-204ENST00000503060 NPFFR1Q9GZQ6 430 aa8.81□□□□□ -1
USP46-204ENST00000503060 PKIGQ9Y2B9 76 aa8.81□□□□□ -1
USP46-204ENST00000503060 CR1P17927 2039 aa8.81□□□□□ -1
USP46-204ENST00000503060 PTPN13Q12923 2485 aa8.8□□□□□ -1
USP46-204ENST00000503060 FOXI2Q6ZQN5 318 aa8.8□□□□□ -1
USP46-204ENST00000503060 OR2K2Q8NGT1 345 aa8.8□□□□□ -1
USP46-204ENST00000503060 NAA38Q9BRA0 125 aaKnown RBP8.8□□□□□ -1
USP46-204ENST00000503060 AGPAT4-IT1Q9H0P7 198 aa8.8□□□□□ -1
USP46-204ENST00000503060 USP9YO00507 2555 aaPredicted RBP8.8□□□□□ -1
USP46-204ENST00000503060 BORCS7Q96B45 105 aa8.8□□□□□ -1
USP46-204ENST00000503060 NRN1Q9NPD7 142 aa8.8□□□□□ -1
USP46-204ENST00000503060 CELSR2Q9HCU4 2923 aa8.79□□□□□ -1
USP46-204ENST00000503060 PSMB8P28062 276 aa8.79□□□□□ -1
USP46-204ENST00000503060 LYZL1Q6UWQ5 148 aa8.79□□□□□ -1
USP46-204ENST00000503060 Q6YL49 198 aa8.79□□□□□ -1
USP46-204ENST00000503060 SYT8Q8NBV8 401 aa8.79□□□□□ -1
USP46-204ENST00000503060 CYSLTR1Q9Y271 337 aa8.79□□□□□ -1
USP46-204ENST00000503060 RNF114Q9Y508 228 aa8.79□□□□□ -1
USP46-204ENST00000503060 FAM106AQ4KMX7 169 aa8.79□□□□□ -1
USP46-204ENST00000503060 KRTAP1-3Q8IUG1 177 aa8.79□□□□□ -1
USP46-204ENST00000503060 FAM19A2Q8N3H0 131 aa8.79□□□□□ -1
USP46-204ENST00000503060 CELSR1Q9NYQ6 3014 aa8.78□□□□□ -1
USP46-204ENST00000503060 ZNF705DP0CH99 300 aaPredicted RBP8.78□□□□□ -1
USP46-204ENST00000503060 ZNF705BP0CI00 300 aaPredicted RBP8.78□□□□□ -1
USP46-204ENST00000503060 ZNF138P52744 262 aa8.78□□□□□ -1
USP46-204ENST00000503060 C9orf47Q6ZRZ4 202 aa8.78□□□□□ -1
USP46-204ENST00000503060 GPHB5Q86YW7 130 aa8.78□□□□□ -1
USP46-204ENST00000503060 OR5A1Q8NGJ0 315 aa8.78□□□□□ -1
USP46-204ENST00000503060 MAP1AP78559 2803 aaPredicted RBP8.78□□□□□ -1
USP46-204ENST00000503060 IGHV7-4-1A0A0J9YVY3 117 aa8.78□□□□□ -1
USP46-204ENST00000503060 URB1-AS1Q96HZ7 61 aa8.78□□□□□ -1
USP46-204ENST00000503060 NAV2Q8IVL1 2488 aa8.77□□□□□ -1.01
USP46-204ENST00000503060 IGLC6P0CF74 106 aa8.77□□□□□ -1.01
USP46-204ENST00000503060 CTRLP40313 264 aa8.77□□□□□ -1.01
USP46-204ENST00000503060 C10orf99Q6UWK7 81 aa8.77□□□□□ -1.01
USP46-204ENST00000503060 ZNF493Q6ZR52 646 aa8.77□□□□□ -1.01
USP46-204ENST00000503060 ZNF575Q86XF7 245 aa8.77□□□□□ -1.01
USP46-204ENST00000503060 MRPS16Q9Y3D3 137 aaKnown RBP8.77□□□□□ -1.01
USP46-204ENST00000503060 ZFHX3Q15911 3703 aa8.77□□□□□ -1.01
USP46-204ENST00000503060 PRRC2AP48634 2157 aaKnown RBP8.77□□□□□ -1.01
USP46-204ENST00000503060 SOCS3O14543 225 aa8.76□□□□□ -1.01
USP46-204ENST00000503060 KRTDAPP60985 99 aa8.76□□□□□ -1.01
USP46-204ENST00000503060 PSMG3-AS1Q96PY0 264 aa8.76□□□□□ -1.01
USP46-204ENST00000503060 RHPN1-AS1Q9BWJ2 59 aa8.76□□□□□ -1.01
USP46-204ENST00000503060 SIGLEC8Q9NYZ4 499 aa8.76□□□□□ -1.01
USP46-204ENST00000503060 K7EMT4 169 aa8.76□□□□□ -1.01
USP46-204ENST00000503060 HOXA3O43365 443 aaPredicted RBP8.76□□□□□ -1.01
USP46-204ENST00000503060 DAZ1Q9NQZ3 744 aaKnown RBP8.76□□□□□ -1.01
USP46-204ENST00000503060 UQCR10Q9UDW1 63 aa8.76□□□□□ -1.01
USP46-204ENST00000503060 TEX43Q6ZNM6 134 aa8.75□□□□□ -1.01
USP46-204ENST00000503060 ZNF702PQ9H963 129 aa8.75□□□□□ -1.01
USP46-204ENST00000503060 ABCA12Q86UK0 2595 aa8.75□□□□□ -1.01
USP46-204ENST00000503060 SPRY2O43597 315 aa8.75□□□□□ -1.01
USP46-204ENST00000503060 CRLF1O75462 422 aa8.75□□□□□ -1.01
USP46-204ENST00000503060 UFSP1Q6NVU6 142 aa8.75□□□□□ -1.01
USP46-204ENST00000503060 Q8N976 141 aa8.75□□□□□ -1.01
USP46-204ENST00000503060 CHCHD1Q96BP2 118 aaKnown RBP8.75□□□□□ -1.01
USP46-204ENST00000503060 VAMP8Q9BV40 100 aa8.75□□□□□ -1.01
USP46-204ENST00000503060 MUC21A0A0G2JKD1 596 aa8.74□□□□□ -1.01
USP46-204ENST00000503060 MUC21A0A140T8X8 626 aa8.74□□□□□ -1.01
USP46-204ENST00000503060 OVOL1O14753 267 aa8.74□□□□□ -1.01
USP46-204ENST00000503060 C3orf79P0CE67 100 aa8.74□□□□□ -1.01
USP46-204ENST00000503060 RPL11P62913 178 aaKnown RBP8.74□□□□□ -1.01
USP46-204ENST00000503060 MUC21Q5SSG8 566 aa8.74□□□□□ -1.01
USP46-204ENST00000503060 AMMECR1LQ6DCA0 310 aa8.74□□□□□ -1.01
USP46-204ENST00000503060 CENPEQ02224 2701 aa8.74□□□□□ -1.01
USP46-204ENST00000503060 CSMD2Q7Z408 3487 aa8.74□□□□□ -1.01
USP46-204ENST00000503060 ATP5LO75964 103 aa8.74□□□□□ -1.01
USP46-204ENST00000503060 FAM104BQ5XKR9 115 aa8.74□□□□□ -1.01
USP46-204ENST00000503060 C11orf21Q9P2W6 132 aa8.74□□□□□ -1.01
USP46-204ENST00000503060 LENEPQ9Y5L5 61 aa8.74□□□□□ -1.01
USP46-204ENST00000503060 IGKV3D-20A0A0C4DH25 116 aa8.73□□□□□ -1.01
USP46-204ENST00000503060 SPINK8P0C7L1 97 aa8.73□□□□□ -1.01
USP46-204ENST00000503060 NHLRC4P0CG21 123 aaPredicted RBP8.73□□□□□ -1.01
USP46-204ENST00000503060 GATA1P15976 413 aaPredicted RBP8.73□□□□□ -1.01
USP46-204ENST00000503060 HNRNPA3P51991 378 aaKnown RBP8.73□□□□□ -1.01
USP46-204ENST00000503060 Q6ZVH6 145 aa8.73□□□□□ -1.01
USP46-204ENST00000503060 C7orf71A4D174 169 aa8.73□□□□□ -1.01
USP46-204ENST00000503060 FAM181BA6NEQ2 426 aa8.73□□□□□ -1.01
USP46-204ENST00000503060 ELANEP08246 267 aa8.73□□□□□ -1.01
USP46-204ENST00000503060 LINC00694P0DN24 101 aa8.73□□□□□ -1.01
USP46-204ENST00000503060 HILS1P60008 231 aa8.73□□□□□ -1.01
USP46-204ENST00000503060 TWIST1Q15672 202 aa8.73□□□□□ -1.01
USP46-204ENST00000503060 OR10J6PQ8NGY7 276 aa8.73□□□□□ -1.01
USP46-204ENST00000503060 MYOZ3Q8TDC0 251 aa8.73□□□□□ -1.01
USP46-204ENST00000503060 PRADC1Q9BSG0 188 aa8.73□□□□□ -1.01
USP46-204ENST00000503060 CNFNQ9BYD5 112 aa8.73□□□□□ -1.01
USP46-204ENST00000503060 IGKV3-7A0A075B6H7 116 aa8.72□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms