RNA–Protein interactions for RNA: ENST00000502908.2

SCARB2-203, Transcript of scavenger receptor class B member 2, humanhuman

TSL 2

Gene SCARB2, Length 2,552 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-203ENST00000502908 BAALCQ8WXS3 180 aa14.07□□□□□ -0.16
SCARB2-203ENST00000502908 TOMM6Q96B49 74 aa14.07□□□□□ -0.16
SCARB2-203ENST00000502908 JPT2Q9H910 190 aa14.07□□□□□ -0.16
SCARB2-203ENST00000502908 C19orf84I3L1E1 186 aa14.06□□□□□ -0.16
SCARB2-203ENST00000502908 HLA-DRB4P13762 266 aa14.06□□□□□ -0.16
SCARB2-203ENST00000502908 HLA-DRB4X5D2U9 266 aa14.06□□□□□ -0.16
SCARB2-203ENST00000502908 MYMXA0A1B0GTQ4 84 aa14.06□□□□□ -0.16
SCARB2-203ENST00000502908 SOCS3O14543 225 aa14.06□□□□□ -0.16
SCARB2-203ENST00000502908 ORMDL2Q53FV1 153 aa14.06□□□□□ -0.16
SCARB2-203ENST00000502908 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP14.06□□□□□ -0.162e-8■■■□□ 17.7
SCARB2-203ENST00000502908 SPOCK3Q9BQ16 436 aa14.06□□□□□ -0.16
SCARB2-203ENST00000502908 TRBV7-3A0A075B6L6 115 aa14.05□□□□□ -0.16
SCARB2-203ENST00000502908 FOXI2Q6ZQN5 318 aa14.05□□□□□ -0.16
SCARB2-203ENST00000502908 LINC00477Q96M19 166 aa14.05□□□□□ -0.16
SCARB2-203ENST00000502908 RNASE3P12724 160 aaKnown RBP14.05□□□□□ -0.16
SCARB2-203ENST00000502908 C19orf54Q5BKX5 351 aa14.05□□□□□ -0.16
SCARB2-203ENST00000502908 PRSS29PA6NIE9 313 aa14.04□□□□□ -0.16
SCARB2-203ENST00000502908 FAM223BA6NKX1 122 aa14.04□□□□□ -0.16
SCARB2-203ENST00000502908 TMEM238C9JI98 176 aa14.04□□□□□ -0.16
SCARB2-203ENST00000502908 DUSP14O95147 198 aaKnown RBP14.04□□□□□ -0.16
SCARB2-203ENST00000502908 PF4V1P10720 104 aa14.04□□□□□ -0.16
SCARB2-203ENST00000502908 FAM223AQ8IWN6 122 aa14.04□□□□□ -0.16
SCARB2-203ENST00000502908 KLHL30-AS1Q8NEE0 82 aa14.04□□□□□ -0.16
SCARB2-203ENST00000502908 PRADC1Q9BSG0 188 aa14.04□□□□□ -0.16
SCARB2-203ENST00000502908 TRAV12-1A0A0B4J245 112 aa14.04□□□□□ -0.16
SCARB2-203ENST00000502908 LGALS1P09382 135 aaKnown RBP14.04□□□□□ -0.16
SCARB2-203ENST00000502908 IGHV4-38-2P0DP08 117 aa14.04□□□□□ -0.16
SCARB2-203ENST00000502908 BLCAPP62952 87 aa14.04□□□□□ -0.16
SCARB2-203ENST00000502908 ETDBQ3ZM63 59 aa14.04□□□□□ -0.16
SCARB2-203ENST00000502908 PLEKHB2Q96CS7 222 aa14.04□□□□□ -0.16
SCARB2-203ENST00000502908 SCGB2A2Q13296 93 aa14.03□□□□□ -0.16
SCARB2-203ENST00000502908 CD300EQ496F6 205 aaPredicted RBP14.03□□□□□ -0.16
SCARB2-203ENST00000502908 GTSF1LQ9H1H1 148 aa14.03□□□□□ -0.16
SCARB2-203ENST00000502908 A0A087WWL8 130 aa14.02□□□□□ -0.17
SCARB2-203ENST00000502908 LENEPQ9Y5L5 61 aa14.02□□□□□ -0.17
SCARB2-203ENST00000502908 ZNF815PA8K554 130 aa14.01□□□□□ -0.17
SCARB2-203ENST00000502908 NDUFA4O00483 81 aa14.01□□□□□ -0.17
SCARB2-203ENST00000502908 OVOL1O14753 267 aa14.01□□□□□ -0.17
SCARB2-203ENST00000502908 IGHV4-39P01824 125 aa14.01□□□□□ -0.17
SCARB2-203ENST00000502908 SLC25A16P16260 332 aa14.01□□□□□ -0.17
SCARB2-203ENST00000502908 RHPN1-AS1Q9BWJ2 59 aa14.01□□□□□ -0.17
SCARB2-203ENST00000502908 IGHV1-69DA0A0B4J2H0 117 aa14.01□□□□□ -0.17
SCARB2-203ENST00000502908 IGHV1-69P01742 117 aa14.01□□□□□ -0.17
SCARB2-203ENST00000502908 RPL39P62891 51 aaKnown RBP14.01□□□□□ -0.17
SCARB2-203ENST00000502908 RRN3P1Q2M238 152 aa14.01□□□□□ -0.17
SCARB2-203ENST00000502908 C20orf78Q9BR46 151 aa14.01□□□□□ -0.17
SCARB2-203ENST00000502908 SPANXB1Q9NS25 103 aaPredicted RBP14.01□□□□□ -0.17
SCARB2-203ENST00000502908 CSPG4Q6UVK1 2322 aa14.01□□□□□ -0.17
SCARB2-203ENST00000502908 H3BUX3 64 aa14□□□□□ -0.17
SCARB2-203ENST00000502908 TAL2Q16559 108 aa14□□□□□ -0.17
SCARB2-203ENST00000502908 SCGB1D4Q6XE38 83 aa14□□□□□ -0.17
SCARB2-203ENST00000502908 INSL3P51460 131 aa14□□□□□ -0.17
SCARB2-203ENST00000502908 TSSC4Q9Y5U2 329 aaPredicted RBP14□□□□□ -0.17
SCARB2-203ENST00000502908 SORL1Q92673 2214 aa14□□□□□ -0.17
SCARB2-203ENST00000502908 IGHV4-61A0A0C4DH41 118 aa13.99□□□□□ -0.17
SCARB2-203ENST00000502908 CRYGDP07320 174 aa13.99□□□□□ -0.17
SCARB2-203ENST00000502908 IGKV3-20P01619 116 aa13.99□□□□□ -0.17
SCARB2-203ENST00000502908 TMEM95Q3KNT9 176 aa13.99□□□□□ -0.17
SCARB2-203ENST00000502908 MORN3Q6PF18 240 aaPredicted RBP13.99□□□□□ -0.17
SCARB2-203ENST00000502908 PGPEP1Q9NXJ5 209 aa13.99□□□□□ -0.17
SCARB2-203ENST00000502908 TP53TG1Q9Y2A0 90 aa13.99□□□□□ -0.17
SCARB2-203ENST00000502908 TSHBP01222 138 aa13.98□□□□□ -0.17
SCARB2-203ENST00000502908 UTP20O75691 2785 aaKnown RBP13.98□□□□□ -0.17
SCARB2-203ENST00000502908 F5H697 171 aa13.98□□□□□ -0.17
SCARB2-203ENST00000502908 FAM19A4Q96LR4 140 aa13.98□□□□□ -0.17
SCARB2-203ENST00000502908 TRAV12-3A0A0B4J271 114 aa13.97□□□□□ -0.17
SCARB2-203ENST00000502908 C11orf86A6NJI1 115 aa13.97□□□□□ -0.17
SCARB2-203ENST00000502908 F8W1H4 67 aa13.97□□□□□ -0.17
SCARB2-203ENST00000502908 SMAGPQ0VAQ4 97 aa13.97□□□□□ -0.17
SCARB2-203ENST00000502908 FAM74A4Q5TZK3 123 aa13.97□□□□□ -0.17
SCARB2-203ENST00000502908 DOPEY2Q9Y3R5 2298 aa13.96□□□□□ -0.17
SCARB2-203ENST00000502908 HOXA3O43365 443 aaPredicted RBP13.96□□□□□ -0.17
SCARB2-203ENST00000502908 SRSF9Q13242 221 aaKnown RBP eCLIP13.96□□□□□ -0.17
SCARB2-203ENST00000502908 GAGE13Q4V321 117 aa13.96□□□□□ -0.17
SCARB2-203ENST00000502908 MRPL16Q9NX20 251 aaKnown RBP13.96□□□□□ -0.17
SCARB2-203ENST00000502908 AZU1P20160 251 aa13.96□□□□□ -0.17
SCARB2-203ENST00000502908 LINC00315P59091 139 aa13.96□□□□□ -0.17
SCARB2-203ENST00000502908 SPAG8Q99932 426 aaPredicted RBP13.96□□□□□ -0.17
SCARB2-203ENST00000502908 CUBNO60494 3623 aa13.96□□□□□ -0.18
SCARB2-203ENST00000502908 LINC01549A6NIU2 74 aa13.95□□□□□ -0.18
SCARB2-203ENST00000502908 CD7P09564 240 aa13.95□□□□□ -0.18
SCARB2-203ENST00000502908 UCNP55089 124 aa13.95□□□□□ -0.18
SCARB2-203ENST00000502908 SUMO4Q6EEV6 95 aa13.95□□□□□ -0.18
SCARB2-203ENST00000502908 TRAV12-2A0A075B6T6 113 aa13.95□□□□□ -0.18
SCARB2-203ENST00000502908 APOMO95445 188 aa13.95□□□□□ -0.18
SCARB2-203ENST00000502908 SAMD13Q5VXD3 122 aa13.95□□□□□ -0.18
SCARB2-203ENST00000502908 KIF25-AS1Q9Y6Z4 181 aa13.95□□□□□ -0.18
SCARB2-203ENST00000502908 IGLV4-69A0A075B6H9 119 aa13.94□□□□□ -0.18
SCARB2-203ENST00000502908 FAM159AQ6UWV7 190 aa13.94□□□□□ -0.18
SCARB2-203ENST00000502908 PRO0461Q9UI25 63 aa13.94□□□□□ -0.18
SCARB2-203ENST00000502908 COX6B1P14854 86 aa13.93□□□□□ -0.18
SCARB2-203ENST00000502908 CRIP2P52943 208 aaPredicted RBP13.93□□□□□ -0.18
SCARB2-203ENST00000502908 ZFP2Q6ZN57 461 aa13.93□□□□□ -0.18
SCARB2-203ENST00000502908 ZNF256Q9Y2P7 627 aaPredicted RBP13.93□□□□□ -0.18
SCARB2-203ENST00000502908 LOC107984156A0A0G2JMH3 177 aa13.93□□□□□ -0.18
SCARB2-203ENST00000502908 IGHG2P01859 326 aa13.93□□□□□ -0.18
SCARB2-203ENST00000502908 C10orf99Q6UWK7 81 aa13.93□□□□□ -0.18
SCARB2-203ENST00000502908 ARL17AQ8IVW1 177 aa13.93□□□□□ -0.18
SCARB2-203ENST00000502908 A0A1B0GWB2 263 aa13.92□□□□□ -0.18
SCARB2-203ENST00000502908 GAGE12HA6NDE8 117 aa13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 128.3 ms