RNA–Protein interactions for RNA: ENST00000498259.1

SF3A1-210, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 2

Gene SF3A1, Length 875 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-210ENST00000498259 PRIMA1Q86XR5 153 aa6.22□□□□□ -1.41
SF3A1-210ENST00000498259 KIR2DL5AQ8N109 375 aa6.22□□□□□ -1.41
SF3A1-210ENST00000498259 Q8N1Y9 231 aa6.22□□□□□ -1.41
SF3A1-210ENST00000498259 KIR2DL5BQ8NHK3 375 aa6.22□□□□□ -1.41
SF3A1-210ENST00000498259 PTH2Q96A98 100 aa6.22□□□□□ -1.41
SF3A1-210ENST00000498259 TMEM18Q96B42 140 aa6.22□□□□□ -1.41
SF3A1-210ENST00000498259 MRAP2Q96G30 205 aa6.22□□□□□ -1.41
SF3A1-210ENST00000498259 CSTL1Q9H114 145 aa6.22□□□□□ -1.41
SF3A1-210ENST00000498259 DPH3P1Q9H4G8 78 aa6.22□□□□□ -1.41
SF3A1-210ENST00000498259 IGHV3-16A0A0C4DH30 117 aa6.21□□□□□ -1.42
SF3A1-210ENST00000498259 CRXO43186 299 aaPredicted RBP6.21□□□□□ -1.42
SF3A1-210ENST00000498259 HTN1P15515 57 aa6.21□□□□□ -1.42
SF3A1-210ENST00000498259 PMCHP20382 165 aa6.21□□□□□ -1.42
SF3A1-210ENST00000498259 FXYD7P58549 80 aa6.21□□□□□ -1.42
SF3A1-210ENST00000498259 SSTP61278 116 aa6.21□□□□□ -1.42
SF3A1-210ENST00000498259 OR10AG1Q8NH19 301 aa6.21□□□□□ -1.42
SF3A1-210ENST00000498259 CHCHD1Q96BP2 118 aaKnown RBP6.21□□□□□ -1.42
SF3A1-210ENST00000498259 ALKBH7Q9BT30 221 aaPredicted RBP6.21□□□□□ -1.42
SF3A1-210ENST00000498259 XCL2Q9UBD3 114 aa6.21□□□□□ -1.42
SF3A1-210ENST00000498259 SMIM9A6NGZ8 99 aa6.2□□□□□ -1.42
SF3A1-210ENST00000498259 CYSRT1A8MQ03 144 aa6.2□□□□□ -1.42
SF3A1-210ENST00000498259 A8MWV9 139 aa6.2□□□□□ -1.42
SF3A1-210ENST00000498259 M0R2P5 195 aa6.2□□□□□ -1.42
SF3A1-210ENST00000498259 CIDEAO60543 219 aa6.2□□□□□ -1.42
SF3A1-210ENST00000498259 NXPH4O95158 308 aa6.2□□□□□ -1.42
SF3A1-210ENST00000498259 RNASE3P12724 160 aaKnown RBP6.2□□□□□ -1.42
SF3A1-210ENST00000498259 IGLL1P15814 213 aa6.2□□□□□ -1.42
SF3A1-210ENST00000498259 RAB4AP20338 218 aa6.2□□□□□ -1.42
SF3A1-210ENST00000498259 KIR3DS1Q14943 382 aa6.2□□□□□ -1.42
SF3A1-210ENST00000498259 ZNF124Q15973 351 aa6.2□□□□□ -1.42
SF3A1-210ENST00000498259 KIAA1644Q3SXP7 199 aa6.2□□□□□ -1.42
SF3A1-210ENST00000498259 PRSS3P2Q8NHM4 247 aa6.2□□□□□ -1.42
SF3A1-210ENST00000498259 C16orf74Q96GX8 76 aa6.2□□□□□ -1.42
SF3A1-210ENST00000498259 PACRGQ96M98 296 aaPredicted RBP6.2□□□□□ -1.42
SF3A1-210ENST00000498259 C9orf85Q96MD7 179 aa6.2□□□□□ -1.42
SF3A1-210ENST00000498259 RCHY1Q96PM5 261 aa6.2□□□□□ -1.42
SF3A1-210ENST00000498259 SAMD10Q9BYL1 202 aa6.2□□□□□ -1.42
SF3A1-210ENST00000498259 C19orf73Q9NVV2 129 aa6.2□□□□□ -1.42
SF3A1-210ENST00000498259 SETD2Q9BYW2 2564 aaPredicted RBP6.19□□□□□ -1.42
SF3A1-210ENST00000498259 CUBNO60494 3623 aa6.19□□□□□ -1.42
SF3A1-210ENST00000498259 MUC21A0A0G2JKD1 596 aa6.19□□□□□ -1.42
SF3A1-210ENST00000498259 MUC21A0A140T8X8 626 aa6.19□□□□□ -1.42
SF3A1-210ENST00000498259 RBMY1BA6NDE4 496 aaKnown RBP6.19□□□□□ -1.42
SF3A1-210ENST00000498259 RBMY1EA6NEQ0 496 aaKnown RBP6.19□□□□□ -1.42
SF3A1-210ENST00000498259 H7C1H1 209 aa6.19□□□□□ -1.42
SF3A1-210ENST00000498259 RHODO00212 210 aa6.19□□□□□ -1.42
SF3A1-210ENST00000498259 HSBP1O75506 76 aa6.19□□□□□ -1.42
SF3A1-210ENST00000498259 RBMY1DP0C7P1 496 aaKnown RBP6.19□□□□□ -1.42
SF3A1-210ENST00000498259 ESDP10768 282 aa6.19□□□□□ -1.42
SF3A1-210ENST00000498259 RPL35AP18077 110 aaKnown RBP6.19□□□□□ -1.42
SF3A1-210ENST00000498259 G0S2P27469 103 aa6.19□□□□□ -1.42
SF3A1-210ENST00000498259 RRN3P1Q2M238 152 aa6.19□□□□□ -1.42
SF3A1-210ENST00000498259 LGALS9BQ3B8N2 356 aa6.19□□□□□ -1.42
SF3A1-210ENST00000498259 ZNF876PQ49A33 203 aa6.19□□□□□ -1.42
SF3A1-210ENST00000498259 ZNF575Q86XF7 245 aa6.19□□□□□ -1.42
SF3A1-210ENST00000498259 AMN1Q8IY45 258 aa6.19□□□□□ -1.42
SF3A1-210ENST00000498259 DEFB125Q8N687 156 aa6.19□□□□□ -1.42
SF3A1-210ENST00000498259 TMEM263Q8WUH6 116 aaKnown RBP6.19□□□□□ -1.42
SF3A1-210ENST00000498259 PRELID3AQ96N28 172 aa6.19□□□□□ -1.42
SF3A1-210ENST00000498259 MAP1LC3AQ9H492 121 aa6.19□□□□□ -1.42
SF3A1-210ENST00000498259 NXT2Q9NPJ8 142 aaKnown RBP6.19□□□□□ -1.42
SF3A1-210ENST00000498259 U3KQK5 164 aa6.19□□□□□ -1.42
SF3A1-210ENST00000498259 JMJD1CQ15652 2540 aa6.18□□□□□ -1.42
SF3A1-210ENST00000498259 IGHV3OR16-12A0A075B7B8 117 aa6.18□□□□□ -1.42
SF3A1-210ENST00000498259 LOC105371267A0A1B0GV96 52 aa6.18□□□□□ -1.42
SF3A1-210ENST00000498259 D6R8Y8 96 aa6.18□□□□□ -1.42
SF3A1-210ENST00000498259 K7EMI3 77 aa6.18□□□□□ -1.42
SF3A1-210ENST00000498259 TCAPO15273 167 aa6.18□□□□□ -1.42
SF3A1-210ENST00000498259 FRMD6-AS1P0C7T7 363 aa6.18□□□□□ -1.42
SF3A1-210ENST00000498259 LINC00614P0C842 121 aa6.18□□□□□ -1.42
SF3A1-210ENST00000498259 EVI2AP22794 236 aa6.18□□□□□ -1.42
SF3A1-210ENST00000498259 AKR1D1P51857 326 aa6.18□□□□□ -1.42
SF3A1-210ENST00000498259 MRPL51Q4U2R6 128 aaKnown RBP6.18□□□□□ -1.42
SF3A1-210ENST00000498259 FA2HQ7L5A8 372 aa6.18□□□□□ -1.42
SF3A1-210ENST00000498259 C18orf32Q8TCD1 76 aa6.18□□□□□ -1.42
SF3A1-210ENST00000498259 GSN-AS1Q9NRJ2 163 aa6.18□□□□□ -1.42
SF3A1-210ENST00000498259 MSRB1Q9NZV6 116 aa6.18□□□□□ -1.42
SF3A1-210ENST00000498259 MDFICQ9P1T7 246 aa6.18□□□□□ -1.42
SF3A1-210ENST00000498259 LINC01549A6NIU2 74 aa6.17□□□□□ -1.42
SF3A1-210ENST00000498259 F5H697 171 aa6.17□□□□□ -1.42
SF3A1-210ENST00000498259 Q6ZQT7 251 aa6.17□□□□□ -1.42
SF3A1-210ENST00000498259 HIST3H2BBQ8N257 126 aa6.17□□□□□ -1.42
SF3A1-210ENST00000498259 C14orf178Q8N769 122 aaPredicted RBP6.17□□□□□ -1.42
SF3A1-210ENST00000498259 C20orf78Q9BR46 151 aa6.17□□□□□ -1.42
SF3A1-210ENST00000498259 AP5S1Q9NUS5 200 aa6.17□□□□□ -1.42
SF3A1-210ENST00000498259 WNK1Q9H4A3 2382 aa6.17□□□□□ -1.42
SF3A1-210ENST00000498259 SERF1AO75920 110 aa6.16□□□□□ -1.42
SF3A1-210ENST00000498259 MGPP08493 103 aa6.16□□□□□ -1.42
SF3A1-210ENST00000498259 FABP4P15090 132 aa6.16□□□□□ -1.42
SF3A1-210ENST00000498259 EGFEM1PQ0D2K5 195 aa6.16□□□□□ -1.42
SF3A1-210ENST00000498259 DAZ2Q13117 558 aaKnown RBP6.16□□□□□ -1.42
SF3A1-210ENST00000498259 RNASEKQ6P5S7 137 aaKnown RBP6.16□□□□□ -1.42
SF3A1-210ENST00000498259 ZNF705AQ6ZN79 300 aaPredicted RBP6.16□□□□□ -1.42
SF3A1-210ENST00000498259 NIT1Q86X76 327 aa6.16□□□□□ -1.42
SF3A1-210ENST00000498259 C1orf158Q8N1D5 194 aa6.16□□□□□ -1.42
SF3A1-210ENST00000498259 RASL10AQ92737 203 aa6.16□□□□□ -1.42
SF3A1-210ENST00000498259 TEP1Q99973 2627 aaKnown RBP6.15□□□□□ -1.42
SF3A1-210ENST00000498259 PRSS47A8MTI9 375 aa6.15□□□□□ -1.42
SF3A1-210ENST00000498259 A8MZ25 164 aa6.15□□□□□ -1.42
SF3A1-210ENST00000498259 TNFRSF6BO95407 300 aa6.15□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 107.5 ms