RNA–Protein interactions for RNA: ENST00000498043.6

CHRNA4-206, Transcript of cholinergic receptor nicotinic alpha 4 subunit, humanhuman

TSL 5

Gene CHRNA4, Length 2,052 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA4-206ENST00000498043 WFDC10AQ9H1F0 79 aa13.1□□□□□ -0.31
CHRNA4-206ENST00000498043 IGHV4-4A0A075B6R2 117 aa13.09□□□□□ -0.31
CHRNA4-206ENST00000498043 IGHV1OR15-1A0A075B7D0 117 aa13.09□□□□□ -0.31
CHRNA4-206ENST00000498043 MED14OSP0DP75 135 aa13.09□□□□□ -0.31
CHRNA4-206ENST00000498043 ESDP10768 282 aa13.09□□□□□ -0.31
CHRNA4-206ENST00000498043 DNLZQ5SXM8 178 aa13.09□□□□□ -0.31
CHRNA4-206ENST00000498043 SCRT2Q9NQ03 307 aa13.09□□□□□ -0.31
CHRNA4-206ENST00000498043 SMKR1H3BMG3 65 aa13.09□□□□□ -0.31
CHRNA4-206ENST00000498043 NCR2O95944 276 aa13.09□□□□□ -0.31
CHRNA4-206ENST00000498043 DMRTA1Q5VZB9 504 aa13.09□□□□□ -0.31
CHRNA4-206ENST00000498043 RNASEKQ6P5S7 137 aaKnown RBP13.09□□□□□ -0.31
CHRNA4-206ENST00000498043 LINC00518Q8N0U6 118 aa13.09□□□□□ -0.31
CHRNA4-206ENST00000498043 Q8N1Y9 231 aa13.09□□□□□ -0.31
CHRNA4-206ENST00000498043 RNF185Q96GF1 192 aa13.09□□□□□ -0.31
CHRNA4-206ENST00000498043 KRTAP24-1Q3LI83 254 aa13.08□□□□□ -0.32
CHRNA4-206ENST00000498043 SAMD10Q9BYL1 202 aa13.08□□□□□ -0.32
CHRNA4-206ENST00000498043 RAB4AP20338 218 aa13.08□□□□□ -0.32
CHRNA4-206ENST00000498043 PMCHP20382 165 aa13.08□□□□□ -0.32
CHRNA4-206ENST00000498043 BEAN1Q3B7T3 259 aa13.08□□□□□ -0.32
CHRNA4-206ENST00000498043 SMIM15Q7Z3B0 74 aa13.08□□□□□ -0.32
CHRNA4-206ENST00000498043 ORMDL3Q8N138 153 aa13.08□□□□□ -0.32
CHRNA4-206ENST00000498043 IGHV3-16A0A0C4DH30 117 aa13.07□□□□□ -0.32
CHRNA4-206ENST00000498043 HTN1P15515 57 aa13.07□□□□□ -0.32
CHRNA4-206ENST00000498043 CKS2P33552 79 aa13.07□□□□□ -0.32
CHRNA4-206ENST00000498043 TRPT1Q86TN4 253 aaKnown RBP13.07□□□□□ -0.32
CHRNA4-206ENST00000498043 C12orf57Q99622 126 aa13.07□□□□□ -0.32
CHRNA4-206ENST00000498043 MDFICQ9P1T7 246 aa13.07□□□□□ -0.32
CHRNA4-206ENST00000498043 SMIM6P0DI80 62 aa13.06□□□□□ -0.32
CHRNA4-206ENST00000498043 URB1-AS1Q96HZ7 61 aa13.06□□□□□ -0.32
CHRNA4-206ENST00000498043 PRELID3AQ96N28 172 aa13.06□□□□□ -0.32
CHRNA4-206ENST00000498043 U3KQK5 164 aa13.06□□□□□ -0.32
CHRNA4-206ENST00000498043 MUC4Q99102 2169 aa13.06□□□□□ -0.32
CHRNA4-206ENST00000498043 CBY3A6NI87 242 aa13.06□□□□□ -0.32
CHRNA4-206ENST00000498043 INSP01308 110 aa13.05□□□□□ -0.32
CHRNA4-206ENST00000498043 AMTP48728 403 aa13.05□□□□□ -0.32
CHRNA4-206ENST00000498043 NIT1Q86X76 327 aa13.05□□□□□ -0.32
CHRNA4-206ENST00000498043 FAM19A2Q8N3H0 131 aa13.05□□□□□ -0.32
CHRNA4-206ENST00000498043 CLUHP3Q96NS8 147 aa13.05□□□□□ -0.32
CHRNA4-206ENST00000498043 C19orf73Q9NVV2 129 aa13.05□□□□□ -0.32
CHRNA4-206ENST00000498043 XCL2Q9UBD3 114 aa13.05□□□□□ -0.32
CHRNA4-206ENST00000498043 GAS8-AS1O95177 125 aa13.04□□□□□ -0.32
CHRNA4-206ENST00000498043 CMC4P56277 68 aaPredicted RBP13.04□□□□□ -0.32
CHRNA4-206ENST00000498043 PYY3Q5JQD4 70 aa13.04□□□□□ -0.32
CHRNA4-206ENST00000498043 C9orf85Q96MD7 179 aa13.04□□□□□ -0.32
CHRNA4-206ENST00000498043 HSBP1O75506 76 aa13.04□□□□□ -0.32
CHRNA4-206ENST00000498043 NXPH4O95158 308 aa13.04□□□□□ -0.32
CHRNA4-206ENST00000498043 NPYP01303 97 aa13.04□□□□□ -0.32
CHRNA4-206ENST00000498043 TRAV26-2A0A0B4J265 109 aa13.03□□□□□ -0.32
CHRNA4-206ENST00000498043 PRM2P04554 102 aa13.03□□□□□ -0.32
CHRNA4-206ENST00000498043 C14orf178Q8N769 122 aaPredicted RBP13.03□□□□□ -0.32
CHRNA4-206ENST00000498043 AP1S3Q96PC3 154 aa13.03□□□□□ -0.32
CHRNA4-206ENST00000498043 FAM110AQ9BQ89 295 aa13.03□□□□□ -0.32
CHRNA4-206ENST00000498043 TRGV11A0A075B6L2 103 aa13.03□□□□□ -0.32
CHRNA4-206ENST00000498043 C9orf66Q5T8R8 295 aa13.03□□□□□ -0.32
CHRNA4-206ENST00000498043 FBN1P35555 2871 aaKnown RBP13.02□□□□□ -0.32
CHRNA4-206ENST00000498043 LOC389332A0A1B0GUA5 103 aa13.02□□□□□ -0.33
CHRNA4-206ENST00000498043 GATA1P15976 413 aaPredicted RBP13.02□□□□□ -0.33
CHRNA4-206ENST00000498043 PMCHL1Q16048 86 aa13.02□□□□□ -0.33
CHRNA4-206ENST00000498043 LINC01587Q99440 93 aa13.01□□□□□ -0.33
CHRNA4-206ENST00000498043 PPBPP02775 128 aa13.01□□□□□ -0.33
CHRNA4-206ENST00000498043 MGPP08493 103 aa13.01□□□□□ -0.33
CHRNA4-206ENST00000498043 LINC00614P0C842 121 aa13.01□□□□□ -0.33
CHRNA4-206ENST00000498043 RPL35AP18077 110 aaKnown RBP13.01□□□□□ -0.33
CHRNA4-206ENST00000498043 INSL3P51460 131 aa13.01□□□□□ -0.33
CHRNA4-206ENST00000498043 NUTF2P61970 127 aaKnown RBP13.01□□□□□ -0.33
CHRNA4-206ENST00000498043 Q6ZWC4 215 aa13.01□□□□□ -0.33
CHRNA4-206ENST00000498043 PRIMA1Q86XR5 153 aa13.01□□□□□ -0.33
CHRNA4-206ENST00000498043 DPH3P1Q9H4G8 78 aa13.01□□□□□ -0.33
CHRNA4-206ENST00000498043 PRSS3P2Q8NHM4 247 aa13□□□□□ -0.33
CHRNA4-206ENST00000498043 CHCHD1Q96BP2 118 aaKnown RBP13□□□□□ -0.33
CHRNA4-206ENST00000498043 JPT2Q9H910 190 aa13□□□□□ -0.33
CHRNA4-206ENST00000498043 IGHV3OR16-12A0A075B7B8 117 aa13□□□□□ -0.33
CHRNA4-206ENST00000498043 IFI27P40305 119 aaPredicted RBP13□□□□□ -0.33
CHRNA4-206ENST00000498043 CDPF1Q6NVV7 123 aa13□□□□□ -0.33
CHRNA4-206ENST00000498043 TMEM208Q9BTX3 173 aa13□□□□□ -0.33
CHRNA4-206ENST00000498043 DEFB125Q8N687 156 aa12.99□□□□□ -0.33
CHRNA4-206ENST00000498043 C20orf144Q9BQM9 153 aa12.99□□□□□ -0.33
CHRNA4-206ENST00000498043 IGHV1-24A0A0C4DH33 117 aa12.98□□□□□ -0.33
CHRNA4-206ENST00000498043 TNFRSF6BO95407 300 aa12.98□□□□□ -0.33
CHRNA4-206ENST00000498043 FA2HQ7L5A8 372 aa12.98□□□□□ -0.33
CHRNA4-206ENST00000498043 GTSCR1Q86UQ5 136 aa12.98□□□□□ -0.33
CHRNA4-206ENST00000498043 SYT8Q8NBV8 401 aa12.98□□□□□ -0.33
CHRNA4-206ENST00000498043 AP5S1Q9NUS5 200 aa12.98□□□□□ -0.33
CHRNA4-206ENST00000498043 A0A087WWL8 130 aa12.97□□□□□ -0.33
CHRNA4-206ENST00000498043 SMIM17P0DL12 118 aa12.97□□□□□ -0.33
CHRNA4-206ENST00000498043 C1orf158Q8N1D5 194 aa12.97□□□□□ -0.33
CHRNA4-206ENST00000498043 MAP1LC3AQ9H492 121 aa12.97□□□□□ -0.33
CHRNA4-206ENST00000498043 NIT2Q9NQR4 276 aa12.97□□□□□ -0.33
CHRNA4-206ENST00000498043 LAMTOR2Q9Y2Q5 125 aa12.97□□□□□ -0.33
CHRNA4-206ENST00000498043 TRRAPQ9Y4A5 3859 aa12.97□□□□□ -0.33
CHRNA4-206ENST00000498043 ZNF415Q09FC8 603 aa12.97□□□□□ -0.33
CHRNA4-206ENST00000498043 JOSD1Q15040 202 aaPredicted RBP12.97□□□□□ -0.33
CHRNA4-206ENST00000498043 ZNF876PQ49A33 203 aa12.97□□□□□ -0.33
CHRNA4-206ENST00000498043 MRAP2Q96G30 205 aa12.97□□□□□ -0.33
CHRNA4-206ENST00000498043 MAST4O15021 2626 aa12.96□□□□□ -0.33
CHRNA4-206ENST00000498043 GIG44P09565 113 aaPredicted RBP12.96□□□□□ -0.33
CHRNA4-206ENST00000498043 IGLL1P15814 213 aa12.96□□□□□ -0.33
CHRNA4-206ENST00000498043 FAM74A4Q5TZK3 123 aa12.96□□□□□ -0.33
CHRNA4-206ENST00000498043 NRACQ8N912 160 aa12.96□□□□□ -0.33
CHRNA4-206ENST00000498043 GSN-AS1Q9NRJ2 163 aa12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 59.2 ms