RNA–Protein interactions for RNA: ENST00000498020.1

HLA-DMB-262, Transcript of major histocompatibility complex, class II, DM beta, humanhuman

Gene HLA-DMB, Length 4,569 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMB-262ENST00000498020 LYZL1Q6UWQ5 148 aa6.25□□□□□ -1.41
HLA-DMB-262ENST00000498020 OR2K2Q8NGT1 345 aa6.25□□□□□ -1.41
HLA-DMB-262ENST00000498020 ZNF48Q96MX3 618 aaPredicted RBP6.25□□□□□ -1.41
HLA-DMB-262ENST00000498020 TRAV8-2A0A0B4J237 113 aa6.24□□□□□ -1.41
HLA-DMB-262ENST00000498020 DEFB131AP59861 70 aa6.24□□□□□ -1.41
HLA-DMB-262ENST00000498020 Q8N9W7 124 aa6.24□□□□□ -1.41
HLA-DMB-262ENST00000498020 PLEKHB2Q96CS7 222 aa6.24□□□□□ -1.41
HLA-DMB-262ENST00000498020 MS4A6AQ9H2W1 248 aa6.24□□□□□ -1.41
HLA-DMB-262ENST00000498020 D6R8Y8 96 aa6.24□□□□□ -1.41
HLA-DMB-262ENST00000498020 C9orf66Q5T8R8 295 aa6.24□□□□□ -1.41
HLA-DMB-262ENST00000498020 ZFAND6Q6FIF0 208 aa6.24□□□□□ -1.41
HLA-DMB-262ENST00000498020 ZNF664Q8N3J9 261 aa6.24□□□□□ -1.41
HLA-DMB-262ENST00000498020 ORAOV1Q8WV07 137 aa6.24□□□□□ -1.41
HLA-DMB-262ENST00000498020 FANCD2OSQ96PS1 177 aa6.24□□□□□ -1.41
HLA-DMB-262ENST00000498020 XCL2Q9UBD3 114 aa6.24□□□□□ -1.41
HLA-DMB-262ENST00000498020 F5H768 121 aa6.24□□□□□ -1.41
HLA-DMB-262ENST00000498020 NCR2O95944 276 aa6.24□□□□□ -1.41
HLA-DMB-262ENST00000498020 EBI3Q14213 229 aa6.24□□□□□ -1.41
HLA-DMB-262ENST00000498020 TCTEX1D4Q5JR98 221 aa6.24□□□□□ -1.41
HLA-DMB-262ENST00000498020 C1orf194Q5T5A4 169 aa6.24□□□□□ -1.41
HLA-DMB-262ENST00000498020 TEX43Q6ZNM6 134 aa6.24□□□□□ -1.41
HLA-DMB-262ENST00000498020 LURAP1LQ8IV03 231 aa6.24□□□□□ -1.41
HLA-DMB-262ENST00000498020 CST9LQ9H4G1 147 aa6.24□□□□□ -1.41
HLA-DMB-262ENST00000498020 A0A1B0GV72 72 aa6.23□□□□□ -1.41
HLA-DMB-262ENST00000498020 Q8TAT8 98 aa6.23□□□□□ -1.41
HLA-DMB-262ENST00000498020 C18orf32Q8TCD1 76 aa6.23□□□□□ -1.41
HLA-DMB-262ENST00000498020 WI2-2373I1.2A0A1W2PRP0 233 aa6.23□□□□□ -1.41
HLA-DMB-262ENST00000498020 LMO4P61968 165 aa6.23□□□□□ -1.41
HLA-DMB-262ENST00000498020 HSD52Q0P140 79 aa6.23□□□□□ -1.41
HLA-DMB-262ENST00000498020 OXLD1Q5BKU9 147 aa6.23□□□□□ -1.41
HLA-DMB-262ENST00000498020 DMRTA1Q5VZB9 504 aa6.23□□□□□ -1.41
HLA-DMB-262ENST00000498020 RASL10AQ92737 203 aa6.23□□□□□ -1.41
HLA-DMB-262ENST00000498020 ERG28Q9UKR5 140 aa6.23□□□□□ -1.41
HLA-DMB-262ENST00000498020 TANC2Q9HCD6 1990 aa6.23□□□□□ -1.41
HLA-DMB-262ENST00000498020 A8MWP6 167 aa6.23□□□□□ -1.41
HLA-DMB-262ENST00000498020 PAX4O43316 350 aa6.23□□□□□ -1.41
HLA-DMB-262ENST00000498020 SLAQ13239 276 aa6.23□□□□□ -1.41
HLA-DMB-262ENST00000498020 PIFOQ8TCI5 191 aa6.23□□□□□ -1.41
HLA-DMB-262ENST00000498020 PHLDA1Q8WV24 401 aaPredicted RBP6.23□□□□□ -1.41
HLA-DMB-262ENST00000498020 ZNF479Q96JC4 524 aa6.23□□□□□ -1.41
HLA-DMB-262ENST00000498020 TRAV16A0A0A6YYK6 109 aaPredicted RBP6.23□□□□□ -1.41
HLA-DMB-262ENST00000498020 M0R2P5 195 aa6.23□□□□□ -1.41
HLA-DMB-262ENST00000498020 C6orf226Q5I0X4 101 aa6.23□□□□□ -1.41
HLA-DMB-262ENST00000498020 AKAP13Q12802 2813 aa6.22□□□□□ -1.41
HLA-DMB-262ENST00000498020 IGLL1P15814 213 aa6.22□□□□□ -1.41
HLA-DMB-262ENST00000498020 MYCNOSP40205 109 aa6.22□□□□□ -1.41
HLA-DMB-262ENST00000498020 ATXN8Q156A1 80 aa6.22□□□□□ -1.41
HLA-DMB-262ENST00000498020 C17orf77Q96MU5 243 aa6.22□□□□□ -1.41
HLA-DMB-262ENST00000498020 SH2D1AO60880 128 aa6.22□□□□□ -1.41
HLA-DMB-262ENST00000498020 TRBV6-1A0A0K0K1D8 114 aa6.22□□□□□ -1.41
HLA-DMB-262ENST00000498020 A8MWV9 139 aa6.22□□□□□ -1.41
HLA-DMB-262ENST00000498020 IGHV3-53P01767 116 aa6.22□□□□□ -1.41
HLA-DMB-262ENST00000498020 CTSGP08311 255 aa6.22□□□□□ -1.41
HLA-DMB-262ENST00000498020 CDPF1Q6NVV7 123 aa6.22□□□□□ -1.41
HLA-DMB-262ENST00000498020 DYNAPQ8N1N2 210 aa6.22□□□□□ -1.41
HLA-DMB-262ENST00000498020 C14orf178Q8N769 122 aaPredicted RBP6.22□□□□□ -1.41
HLA-DMB-262ENST00000498020 IGHV3-64A0A075B6Q5 118 aa6.21□□□□□ -1.41
HLA-DMB-262ENST00000498020 IGHV3-73A0A0B4J1V6 119 aa6.21□□□□□ -1.41
HLA-DMB-262ENST00000498020 RHODO00212 210 aa6.21□□□□□ -1.41
HLA-DMB-262ENST00000498020 PCP4P48539 62 aa6.21□□□□□ -1.41
HLA-DMB-262ENST00000498020 IGLC2P0DOY2 106 aa6.21□□□□□ -1.42
HLA-DMB-262ENST00000498020 Q6ZWC4 215 aa6.21□□□□□ -1.42
HLA-DMB-262ENST00000498020 NUPR1O60356 82 aa6.21□□□□□ -1.42
HLA-DMB-262ENST00000498020 ESDP10768 282 aa6.21□□□□□ -1.42
HLA-DMB-262ENST00000498020 MRGPRG-AS1Q2M3A8 158 aa6.21□□□□□ -1.42
HLA-DMB-262ENST00000498020 ZC2HC1AQ96GY0 325 aa6.21□□□□□ -1.42
HLA-DMB-262ENST00000498020 MEGF9Q9H1U4 602 aa6.21□□□□□ -1.42
HLA-DMB-262ENST00000498020 ELANEP08246 267 aa6.21□□□□□ -1.42
HLA-DMB-262ENST00000498020 C3orf79P0CE67 100 aa6.21□□□□□ -1.42
HLA-DMB-262ENST00000498020 APOC4P55056 127 aa6.21□□□□□ -1.42
HLA-DMB-262ENST00000498020 ERCC8Q13216 396 aa6.21□□□□□ -1.42
HLA-DMB-262ENST00000498020 ASPHD1Q5U4P2 390 aa6.21□□□□□ -1.42
HLA-DMB-262ENST00000498020 MBD6Q96DN6 1003 aa6.21□□□□□ -1.42
HLA-DMB-262ENST00000498020 MLST8Q9BVC4 326 aa6.21□□□□□ -1.42
HLA-DMB-262ENST00000498020 FRMD6-AS1P0C7T7 363 aa6.2□□□□□ -1.42
HLA-DMB-262ENST00000498020 Q8N6K4 173 aa6.2□□□□□ -1.42
HLA-DMB-262ENST00000498020 CSTL1Q9H114 145 aa6.2□□□□□ -1.42
HLA-DMB-262ENST00000498020 IGSF10Q6WRI0 2623 aa6.2□□□□□ -1.42
HLA-DMB-262ENST00000498020 ARMS2P0C7Q2 107 aa6.2□□□□□ -1.42
HLA-DMB-262ENST00000498020 POLR3KQ9Y2Y1 108 aaPredicted RBP6.2□□□□□ -1.42
HLA-DMB-262ENST00000498020 RAI1Q7Z5J4 1906 aaPredicted RBP6.2□□□□□ -1.42
HLA-DMB-262ENST00000498020 C19orf71A6NCJ1 209 aa6.2□□□□□ -1.42
HLA-DMB-262ENST00000498020 EREGO14944 169 aa6.2□□□□□ -1.42
HLA-DMB-262ENST00000498020 SLURP1P55000 103 aa6.2□□□□□ -1.42
HLA-DMB-262ENST00000498020 DAD1P61803 113 aa6.2□□□□□ -1.42
HLA-DMB-262ENST00000498020 GATD1Q8NB37 220 aa6.2□□□□□ -1.42
HLA-DMB-262ENST00000498020 TET2Q6N021 2002 aaPredicted RBP6.2□□□□□ -1.42
HLA-DMB-262ENST00000498020 KLF5Q13887 457 aaPredicted RBP6.2□□□□□ -1.42
HLA-DMB-262ENST00000498020 IGFL4Q6B9Z1 124 aa6.2□□□□□ -1.42
HLA-DMB-262ENST00000498020 ZC2HC1BQ5TFG8 222 aa6.19□□□□□ -1.42
HLA-DMB-262ENST00000498020 C8orf49Q96NF6 230 aa6.19□□□□□ -1.42
HLA-DMB-262ENST00000498020 C20orf144Q9BQM9 153 aa6.19□□□□□ -1.42
HLA-DMB-262ENST00000498020 TRAV13-1A0A0B4J241 112 aa6.19□□□□□ -1.42
HLA-DMB-262ENST00000498020 MYMXA0A1B0GTQ4 84 aa6.19□□□□□ -1.42
HLA-DMB-262ENST00000498020 CFHR3Q02985 330 aa6.19□□□□□ -1.42
HLA-DMB-262ENST00000498020 SS18Q15532 418 aa6.19□□□□□ -1.42
HLA-DMB-262ENST00000498020 PRIMA1Q86XR5 153 aa6.19□□□□□ -1.42
HLA-DMB-262ENST00000498020 C5orf56Q8N8D9 126 aa6.19□□□□□ -1.42
HLA-DMB-262ENST00000498020 ATP6V0BQ99437 205 aa6.19□□□□□ -1.42
HLA-DMB-262ENST00000498020 C11orf68Q9H3H3 251 aaKnown RBP6.19□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms