RNA–Protein interactions for RNA: ENST00000497960.5

NUP50-219, Transcript of nucleoporin 50, humanhuman

TSL 2

Gene NUP50, Length 986 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-219ENST00000497960 DNAH6Q9C0G6 4158 aa10.72□□□□□ -0.69
NUP50-219ENST00000497960 A0A0J9YY99 117 aa10.71□□□□□ -0.69
NUP50-219ENST00000497960 C9JQL5 133 aa10.71□□□□□ -0.69
NUP50-219ENST00000497960 GNRH2O43555 120 aa10.71□□□□□ -0.69
NUP50-219ENST00000497960 DAZAP1Q96EP5 407 aaKnown RBP10.71□□□□□ -0.69
NUP50-219ENST00000497960 C18orf15Q96N68 181 aa10.71□□□□□ -0.69
NUP50-219ENST00000497960 NACAE9PAV3 2078 aa10.7□□□□□ -0.7
NUP50-219ENST00000497960 TMSB15BA0A087X1C1 80 aa10.7□□□□□ -0.7
NUP50-219ENST00000497960 IGKV3D-20A0A0C4DH25 116 aa10.7□□□□□ -0.7
NUP50-219ENST00000497960 IGHV3-16A0A0C4DH30 117 aa10.7□□□□□ -0.7
NUP50-219ENST00000497960 SPINK4O60575 86 aa10.7□□□□□ -0.7
NUP50-219ENST00000497960 HOXA5P20719 270 aa10.7□□□□□ -0.7
NUP50-219ENST00000497960 S100A4P26447 101 aaKnown RBP10.7□□□□□ -0.7
NUP50-219ENST00000497960 ASIPP42127 132 aa10.7□□□□□ -0.7
NUP50-219ENST00000497960 LINC01559Q495D7 138 aa10.7□□□□□ -0.7
NUP50-219ENST00000497960 Q6ZR54 194 aa10.7□□□□□ -0.7
NUP50-219ENST00000497960 MDFICQ9P1T7 246 aa10.7□□□□□ -0.7
NUP50-219ENST00000497960 MUC4Q99102 2169 aa10.69□□□□□ -0.7
NUP50-219ENST00000497960 KRBOX1C9JBD0 128 aa10.69□□□□□ -0.7
NUP50-219ENST00000497960 H3BNG1 76 aa10.69□□□□□ -0.7
NUP50-219ENST00000497960 RPL19P84098 196 aaKnown RBP10.69□□□□□ -0.7
NUP50-219ENST00000497960 FAM74A3Q4VXF1 159 aa10.69□□□□□ -0.7
NUP50-219ENST00000497960 SOHLH1Q5JUK2 328 aa10.69□□□□□ -0.7
NUP50-219ENST00000497960 COMMD7Q86VX2 200 aa10.69□□□□□ -0.7
NUP50-219ENST00000497960 MRPL16Q9NX20 251 aaKnown RBP10.69□□□□□ -0.7
NUP50-219ENST00000497960 DNAH10Q8IVF4 4471 aa10.68□□□□□ -0.7
NUP50-219ENST00000497960 GRIFINA4D1Z8 144 aa10.68□□□□□ -0.7
NUP50-219ENST00000497960 K7EN84 100 aa10.68□□□□□ -0.7
NUP50-219ENST00000497960 P01737 135 aa10.68□□□□□ -0.7
NUP50-219ENST00000497960 SFTA3P0C7M3 94 aa10.68□□□□□ -0.7
NUP50-219ENST00000497960 OCC1Q8TAD7 63 aa10.68□□□□□ -0.7
NUP50-219ENST00000497960 SPXQ9BT56 116 aa10.68□□□□□ -0.7
NUP50-219ENST00000497960 LINC00588Q9Y4M8 146 aa10.68□□□□□ -0.7
NUP50-219ENST00000497960 LY96Q9Y6Y9 160 aa10.68□□□□□ -0.7
NUP50-219ENST00000497960 C19orf71A6NCJ1 209 aa10.67□□□□□ -0.7
NUP50-219ENST00000497960 PRSS29PA6NIE9 313 aa10.67□□□□□ -0.7
NUP50-219ENST00000497960 H3BVH4 76 aa10.67□□□□□ -0.7
NUP50-219ENST00000497960 RTL8CO15255 209 aa10.67□□□□□ -0.7
NUP50-219ENST00000497960 ZNRF2Q8NHG8 242 aa10.67□□□□□ -0.7
NUP50-219ENST00000497960 FRAS1Q86XX4 4008 aa10.66□□□□□ -0.7
NUP50-219ENST00000497960 ADIRFQ15847 76 aa10.66□□□□□ -0.7
NUP50-219ENST00000497960 C1orf134Q5TEV5 83 aa10.66□□□□□ -0.7
NUP50-219ENST00000497960 UQCC3Q6UW78 93 aa10.66□□□□□ -0.7
NUP50-219ENST00000497960 LINC01551Q86U37 167 aa10.66□□□□□ -0.7
NUP50-219ENST00000497960 OR2D3Q8NGH3 330 aa10.66□□□□□ -0.7
NUP50-219ENST00000497960 C9orf85Q96MD7 179 aa10.66□□□□□ -0.7
NUP50-219ENST00000497960 RNASE7Q9H1E1 156 aaKnown RBP10.66□□□□□ -0.7
NUP50-219ENST00000497960 NAT8Q9UHE5 227 aa10.66□□□□□ -0.7
NUP50-219ENST00000497960 NBDYA0A0U1RRE5 68 aa10.65□□□□□ -0.7
NUP50-219ENST00000497960 M0R2P5 195 aa10.65□□□□□ -0.7
NUP50-219ENST00000497960 IGHV3-53P01767 116 aa10.65□□□□□ -0.7
NUP50-219ENST00000497960 CXCL1P09341 107 aa10.65□□□□□ -0.7
NUP50-219ENST00000497960 RNASE3P12724 160 aaKnown RBP10.65□□□□□ -0.7
NUP50-219ENST00000497960 RPS20P60866 119 aaKnown RBP10.65□□□□□ -0.7
NUP50-219ENST00000497960 TMEM241Q24JQ0 296 aa10.65□□□□□ -0.7
NUP50-219ENST00000497960 XKRY2A2RUG3 117 aa10.64□□□□□ -0.71
NUP50-219ENST00000497960 LINC00862A6NCI5 91 aa10.64□□□□□ -0.71
NUP50-219ENST00000497960 PAX4O43316 350 aa10.64□□□□□ -0.71
NUP50-219ENST00000497960 SLAQ13239 276 aa10.64□□□□□ -0.71
NUP50-219ENST00000497960 DNLZQ5SXM8 178 aa10.64□□□□□ -0.71
NUP50-219ENST00000497960 NUDT10Q8NFP7 164 aa10.64□□□□□ -0.71
NUP50-219ENST00000497960 NUDT11Q96G61 164 aa10.64□□□□□ -0.71
NUP50-219ENST00000497960 VSIG2Q96IQ7 327 aa10.64□□□□□ -0.71
NUP50-219ENST00000497960 RPP21Q9H633 154 aaKnown RBP10.64□□□□□ -0.71
NUP50-219ENST00000497960 IL36BQ9NZH7 164 aa10.64□□□□□ -0.71
NUP50-219ENST00000497960 GATCO43716 136 aaKnown RBP10.63□□□□□ -0.71
NUP50-219ENST00000497960 ARMS2P0C7Q2 107 aa10.63□□□□□ -0.71
NUP50-219ENST00000497960 ERVFC1-1P60608 527 aa10.63□□□□□ -0.71
NUP50-219ENST00000497960 RPL23P62829 140 aaKnown RBP10.63□□□□□ -0.71
NUP50-219ENST00000497960 ESRGQ1W209 222 aa10.63□□□□□ -0.71
NUP50-219ENST00000497960 SYT8Q8NBV8 401 aa10.63□□□□□ -0.71
NUP50-219ENST00000497960 Q9H8V8 135 aa10.63□□□□□ -0.71
NUP50-219ENST00000497960 PRO0255Q9UI72 69 aa10.63□□□□□ -0.71
NUP50-219ENST00000497960 A0A096LPF7 62 aa10.62□□□□□ -0.71
NUP50-219ENST00000497960 MED14OSP0DP75 135 aa10.62□□□□□ -0.71
NUP50-219ENST00000497960 GZMBP10144 247 aa10.62□□□□□ -0.71
NUP50-219ENST00000497960 FAM231DQ6ZW35 169 aa10.62□□□□□ -0.71
NUP50-219ENST00000497960 RASL10AQ92737 203 aa10.62□□□□□ -0.71
NUP50-219ENST00000497960 ISOC2Q96AB3 205 aa10.62□□□□□ -0.71
NUP50-219ENST00000497960 TPPP3Q9BW30 176 aa10.62□□□□□ -0.71
NUP50-219ENST00000497960 PHLDA3Q9Y5J5 127 aa10.62□□□□□ -0.71
NUP50-219ENST00000497960 ICOSQ9Y6W8 199 aa10.62□□□□□ -0.71
NUP50-219ENST00000497960 TRGV4A0A0C4DH28 118 aa10.61□□□□□ -0.71
NUP50-219ENST00000497960 ZNF876PQ49A33 203 aa10.61□□□□□ -0.71
NUP50-219ENST00000497960 C15orf54Q8N8G6 183 aa10.61□□□□□ -0.71
NUP50-219ENST00000497960 FER1L6-AS1Q8NA97 138 aa10.61□□□□□ -0.71
NUP50-219ENST00000497960 UPK3BQ9BT76 320 aa10.61□□□□□ -0.71
NUP50-219ENST00000497960 HHLA3Q9XRX5 114 aa10.61□□□□□ -0.71
NUP50-219ENST00000497960 MRPS16Q9Y3D3 137 aaKnown RBP10.61□□□□□ -0.71
NUP50-219ENST00000497960 A0A1B0GVY2 172 aa10.6□□□□□ -0.71
NUP50-219ENST00000497960 M0R381 172 aa10.6□□□□□ -0.71
NUP50-219ENST00000497960 CRYBA4P53673 196 aa10.6□□□□□ -0.71
NUP50-219ENST00000497960 FHL2Q14192 279 aa10.6□□□□□ -0.71
NUP50-219ENST00000497960 TTC32Q5I0X7 151 aa10.6□□□□□ -0.71
NUP50-219ENST00000497960 ZFP82Q8N141 532 aa10.6□□□□□ -0.71
NUP50-219ENST00000497960 C6orf223Q8N319 242 aa10.6□□□□□ -0.71
NUP50-219ENST00000497960 SFRP2Q96HF1 295 aa10.6□□□□□ -0.71
NUP50-219ENST00000497960 TRAV4A0A0B4J268 109 aa10.59□□□□□ -0.71
NUP50-219ENST00000497960 F8W036 122 aa10.59□□□□□ -0.71
NUP50-219ENST00000497960 SNAI2O43623 268 aa10.59□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms