RNA–Protein interactions for RNA: ENST00000497580.5

GAPVD1-220, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 2

Gene GAPVD1, Length 3,720 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-220ENST00000497580 DKK4Q9UBT3 224 aa10.05□□□□□ -0.8
GAPVD1-220ENST00000497580 TIMM23O14925 209 aa10.05□□□□□ -0.8
GAPVD1-220ENST00000497580 DUSP14O95147 198 aaKnown RBP10.05□□□□□ -0.8
GAPVD1-220ENST00000497580 SUMO2P61956 95 aaKnown RBP10.05□□□□□ -0.8
GAPVD1-220ENST00000497580 CHCHD5Q9BSY4 110 aa10.05□□□□□ -0.8
GAPVD1-220ENST00000497580 A0A0J9YY99 117 aa10.04□□□□□ -0.8
GAPVD1-220ENST00000497580 ORMDL2Q53FV1 153 aa10.04□□□□□ -0.8
GAPVD1-220ENST00000497580 A4D1N5 150 aa10.04□□□□□ -0.8
GAPVD1-220ENST00000497580 THBDP07204 575 aa10.04□□□□□ -0.8
GAPVD1-220ENST00000497580 LINC00311Q8N616 119 aa10.04□□□□□ -0.8
GAPVD1-220ENST00000497580 C17orf100A8MU93 164 aa10.04□□□□□ -0.8
GAPVD1-220ENST00000497580 LY6HO94772 140 aa10.04□□□□□ -0.8
GAPVD1-220ENST00000497580 CRYGBP07316 175 aa10.04□□□□□ -0.8
GAPVD1-220ENST00000497580 SEM1Q6ZVN7 128 aa10.04□□□□□ -0.8
GAPVD1-220ENST00000497580 SMAD5-AS1Q9Y6J3 95 aa10.04□□□□□ -0.8
GAPVD1-220ENST00000497580 DOPEY2Q9Y3R5 2298 aa10.03□□□□□ -0.8
GAPVD1-220ENST00000497580 TRAV12-1A0A0B4J245 112 aa10.03□□□□□ -0.8
GAPVD1-220ENST00000497580 LINC01546A6NGU7 62 aa10.03□□□□□ -0.8
GAPVD1-220ENST00000497580 ZNF56Q15929 161 aa10.03□□□□□ -0.8
GAPVD1-220ENST00000497580 RAB1BQ9H0U4 201 aa10.03□□□□□ -0.8
GAPVD1-220ENST00000497580 PPDPFQ9H3Y8 114 aa10.03□□□□□ -0.8
GAPVD1-220ENST00000497580 TMEM178BH3BS89 294 aa10.03□□□□□ -0.8
GAPVD1-220ENST00000497580 TMEM95Q3KNT9 176 aa10.03□□□□□ -0.8
GAPVD1-220ENST00000497580 IGHG4P01861 327 aa10.03□□□□□ -0.8
GAPVD1-220ENST00000497580 TIMD4Q96H15 378 aa10.03□□□□□ -0.8
GAPVD1-220ENST00000497580 CNFNQ9BYD5 112 aa10.03□□□□□ -0.8
GAPVD1-220ENST00000497580 AGPAT4-IT1Q9H0P7 198 aa10.03□□□□□ -0.8
GAPVD1-220ENST00000497580 LGALS3P17931 250 aaKnown RBP10.02□□□□□ -0.81
GAPVD1-220ENST00000497580 BUB1B-PAK6H3BSN5 160 aa10.02□□□□□ -0.81
GAPVD1-220ENST00000497580 IGHG3P01860 377 aa10.02□□□□□ -0.81
GAPVD1-220ENST00000497580 ELANEP08246 267 aa10.02□□□□□ -0.81
GAPVD1-220ENST00000497580 TSPEAR-AS2P59090 65 aa10.02□□□□□ -0.81
GAPVD1-220ENST00000497580 BSPH1Q075Z2 132 aa10.02□□□□□ -0.81
GAPVD1-220ENST00000497580 FOXC1Q12948 553 aa10.02□□□□□ -0.81
GAPVD1-220ENST00000497580 FAM57AQ8TBR7 257 aa10.02□□□□□ -0.81
GAPVD1-220ENST00000497580 CUBNO60494 3623 aa10.01□□□□□ -0.81
GAPVD1-220ENST00000497580 LINC01619G3V211 115 aa10.01□□□□□ -0.81
GAPVD1-220ENST00000497580 ASIPP42127 132 aa10.01□□□□□ -0.81
GAPVD1-220ENST00000497580 TOMM6Q96B49 74 aa10.01□□□□□ -0.81
GAPVD1-220ENST00000497580 PRSS2P07478 247 aa10□□□□□ -0.81
GAPVD1-220ENST00000497580 NPC2P61916 151 aa10□□□□□ -0.81
GAPVD1-220ENST00000497580 YAE1D1Q9NRH1 226 aa10□□□□□ -0.81
GAPVD1-220ENST00000497580 TP53TG1Q9Y2A0 90 aa10□□□□□ -0.81
GAPVD1-220ENST00000497580 IGHV3-30P01768 117 aa10□□□□□ -0.81
GAPVD1-220ENST00000497580 IGHV3-30-5P0DP03 117 aa10□□□□□ -0.81
GAPVD1-220ENST00000497580 RPL39P62891 51 aaKnown RBP10□□□□□ -0.81
GAPVD1-220ENST00000497580 CSPG4Q6UVK1 2322 aa10□□□□□ -0.81
GAPVD1-220ENST00000497580 SORL1Q92673 2214 aa10□□□□□ -0.81
GAPVD1-220ENST00000497580 IGHV7-4-1A0A0J9YVY3 117 aa9.99□□□□□ -0.81
GAPVD1-220ENST00000497580 DUX3Q96PT4 197 aa9.99□□□□□ -0.81
GAPVD1-220ENST00000497580 PHLDA3Q9Y5J5 127 aa9.99□□□□□ -0.81
GAPVD1-220ENST00000497580 ADARB2-AS1A8MUL3 147 aa9.99□□□□□ -0.81
GAPVD1-220ENST00000497580 H3BMM0 161 aa9.99□□□□□ -0.81
GAPVD1-220ENST00000497580 COX6B1P14854 86 aa9.99□□□□□ -0.81
GAPVD1-220ENST00000497580 ADIPOQQ15848 244 aa9.99□□□□□ -0.81
GAPVD1-220ENST00000497580 LINC01620Q4KN68 170 aa9.99□□□□□ -0.81
GAPVD1-220ENST00000497580 C2orf82Q6UX34 121 aa9.99□□□□□ -0.81
GAPVD1-220ENST00000497580 UBE2WQ96B02 151 aa9.99□□□□□ -0.81
GAPVD1-220ENST00000497580 NBR2O15453 112 aa9.99□□□□□ -0.81
GAPVD1-220ENST00000497580 IGF1P05019 195 aa9.99□□□□□ -0.81
GAPVD1-220ENST00000497580 DEFB1P60022 68 aa9.99□□□□□ -0.81
GAPVD1-220ENST00000497580 OR10J6PQ8NGY7 276 aa9.99□□□□□ -0.81
GAPVD1-220ENST00000497580 ODF3Q96PU9 254 aa9.99□□□□□ -0.81
GAPVD1-220ENST00000497580 IGKV3-7A0A075B6H7 116 aa9.98□□□□□ -0.81
GAPVD1-220ENST00000497580 F5H697 171 aa9.98□□□□□ -0.81
GAPVD1-220ENST00000497580 M0QXV9 152 aa9.98□□□□□ -0.81
GAPVD1-220ENST00000497580 MRPL23Q16540 153 aaKnown RBP9.98□□□□□ -0.81
GAPVD1-220ENST00000497580 FANCD2OSQ96PS1 177 aa9.98□□□□□ -0.81
GAPVD1-220ENST00000497580 FAM215AQ9Y5M1 114 aa9.98□□□□□ -0.81
GAPVD1-220ENST00000497580 PTPRQQ9UMZ3 2332 aa9.98□□□□□ -0.81
GAPVD1-220ENST00000497580 SBSPONQ8IVN8 264 aa9.98□□□□□ -0.81
GAPVD1-220ENST00000497580 SLC50A1Q9BRV3 221 aa9.98□□□□□ -0.81
GAPVD1-220ENST00000497580 TNFRSF18Q9Y5U5 241 aa9.98□□□□□ -0.81
GAPVD1-220ENST00000497580 NDPQ00604 133 aa9.97□□□□□ -0.81
GAPVD1-220ENST00000497580 ATXN8Q156A1 80 aa9.97□□□□□ -0.81
GAPVD1-220ENST00000497580 DCHS2Q6V1P9 2916 aa9.97□□□□□ -0.81
GAPVD1-220ENST00000497580 CENPVL3A0A0U1RRI6 287 aa9.97□□□□□ -0.81
GAPVD1-220ENST00000497580 VPREB3Q9UKI3 123 aa9.97□□□□□ -0.81
GAPVD1-220ENST00000497580 SPTBN4Q9H254 2564 aa9.97□□□□□ -0.81
GAPVD1-220ENST00000497580 J3QQQ9 107 aa9.97□□□□□ -0.81
GAPVD1-220ENST00000497580 ECSCRQ19T08 205 aa9.97□□□□□ -0.81
GAPVD1-220ENST00000497580 MUSTN1Q8IVN3 82 aa9.97□□□□□ -0.81
GAPVD1-220ENST00000497580 C2CD3Q4AC94 2353 aa9.97□□□□□ -0.81
GAPVD1-220ENST00000497580 IGLV1-47P01700 117 aa9.96□□□□□ -0.81
GAPVD1-220ENST00000497580 IGHV3-33P01772 117 aa9.96□□□□□ -0.81
GAPVD1-220ENST00000497580 SETD2Q9BYW2 2564 aaPredicted RBP9.96□□□□□ -0.81
GAPVD1-220ENST00000497580 COX8CQ7Z4L0 72 aa9.96□□□□□ -0.81
GAPVD1-220ENST00000497580 MSRB2Q9Y3D2 182 aa9.96□□□□□ -0.81
GAPVD1-220ENST00000497580 F8W735 103 aaPredicted RBP9.96□□□□□ -0.82
GAPVD1-220ENST00000497580 CTSGP08311 255 aa9.96□□□□□ -0.82
GAPVD1-220ENST00000497580 SLC25A29Q8N8R3 303 aa9.96□□□□□ -0.82
GAPVD1-220ENST00000497580 OPRPNQ99935 248 aaPredicted RBP9.96□□□□□ -0.82
GAPVD1-220ENST00000497580 CRYGDP07320 174 aa9.95□□□□□ -0.82
GAPVD1-220ENST00000497580 ZNF256Q9Y2P7 627 aaPredicted RBP9.95□□□□□ -0.82
GAPVD1-220ENST00000497580 PRR9Q5T870 116 aa9.95□□□□□ -0.82
GAPVD1-220ENST00000497580 ASCL5Q7RTU5 278 aa9.95□□□□□ -0.82
GAPVD1-220ENST00000497580 DPH3P1Q9H4G8 78 aa9.95□□□□□ -0.82
GAPVD1-220ENST00000497580 IGLV11-55A0A075B6I3 123 aa9.94□□□□□ -0.82
GAPVD1-220ENST00000497580 FAM236AA0A1B0GUQ0 79 aa9.94□□□□□ -0.82
GAPVD1-220ENST00000497580 FAM236BA0A1B0GV22 79 aa9.94□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms